BLASTX nr result

ID: Coptis21_contig00017164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017164
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513301.1| ATP binding protein, putative [Ricinus commu...    53   5e-06
dbj|BAK07305.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   6e-06

>ref|XP_002513301.1| ATP binding protein, putative [Ricinus communis]
           gi|223547209|gb|EEF48704.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 786

 Score = 53.1 bits (126), Expect(2) = 5e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +2

Query: 128 MEAEMRRLTMELKQTMDMYNTACKEAVSGSQ 220
           MEAEMRRL +ELKQTMDMY+TACKEA++  Q
Sbjct: 323 MEAEMRRLKLELKQTMDMYSTACKEALTAKQ 353



 Score = 21.9 bits (45), Expect(2) = 5e-06
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 229 KAVEFHQWKIND 264
           KAVE H+W++ +
Sbjct: 354 KAVELHRWRVEE 365


>dbj|BAK07305.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 575

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +2

Query: 128 MEAEMRRLTMELKQTMDMYNTACKEAVSGSQLDTRL 235
           MEAEMRRL +ELKQTMDMY+TACKEA++  Q  T L
Sbjct: 319 MEAEMRRLRLELKQTMDMYSTACKEALTAKQKATEL 354


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