BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017137
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   465   e-129
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   461   e-127
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...   455   e-126
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   454   e-125
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...   448   e-123

>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score =  465 bits (1197), Expect = e-129
 Identities = 238/333 (71%), Positives = 271/333 (81%), Gaps = 11/333 (3%)
 Frame = -2

Query: 968 MGQSTSTPGMRSV-----SKRHQMMNKSTAVIAP---EENLTLV---NRDIISDLPDELL 822
           MGQS ST  + S      S  H+  +K T  I P   EE    +     D ISDLPDE L
Sbjct: 1   MGQSASTALITSRRDSNRSSSHRSKSKFTVPIMPVQVEEQTEFIFCEGPDYISDLPDECL 60

Query: 821 ANIFHSLNSGDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVSSIQYLFSRFDSVSKLAL 642
           A IF SLNSGDR  CSLVCRRW  IEGQSR RLSL+A+SDL+  + +LFSRFDSV+KLAL
Sbjct: 61  ACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHRLSLNAQSDLLPLVPFLFSRFDSVTKLAL 120

Query: 641 KCDRRSVSIGDEALTLISLGCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSCTF 462
           KCDRRS SIGDEAL  IS  CRNLTRLKLR+CRELTDAGM AFAKNCK LKKLSCGSCTF
Sbjct: 121 KCDRRSTSIGDEALVAISSRCRNLTRLKLRSCRELTDAGMAAFAKNCKALKKLSCGSCTF 180

Query: 461 GVKGMNAILDHCSLLEELSVKRLRGLTDGYRAEPIGPGKAALSLKTICLKELYNGQCFGP 282
           G +GMNAILD+C+ LEELS+KRLRG+TDG  AEP+GPG AA SLKTICLKELYNGQCFGP
Sbjct: 181 GARGMNAILDNCASLEELSLKRLRGITDGAAAEPVGPGLAAASLKTICLKELYNGQCFGP 240

Query: 281 LIAGAKNLRSLKLFRCSGDWDVLLESISGRVSGLVEVHLERLQVSDRGLEAISSCLDLEI 102
           LI G+KNL++LKLFRCSGDWD LL+ IS RV+G+VE+HLERLQVSD GL AIS+CL+LEI
Sbjct: 241 LIIGSKNLKTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDTGLAAISNCLNLEI 300

Query: 101 LHLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 3
           LHLVKTPECT+ G+VSIA+RC++LRK+H+DGWK
Sbjct: 301 LHLVKTPECTDTGLVSIAERCRLLRKLHVDGWK 333


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
            skip-2, putative [Ricinus communis]
          Length = 536

 Score =  461 bits (1187), Expect = e-127
 Identities = 234/334 (70%), Positives = 277/334 (82%), Gaps = 12/334 (3%)
 Frame = -2

Query: 968  MGQSTSTPGMRSVSKR-HQMMNKSTAVIAP---------EENLTLVNR--DIISDLPDEL 825
            MGQS+S+  + +  +  ++  +KSTA+I+P         ++ + ++N   D ISDLPDE 
Sbjct: 1    MGQSSSSTAILTRRESIYRSKSKSTALISPMQTEEPNDKDDVVLIINESPDYISDLPDEC 60

Query: 824  LANIFHSLNSGDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVSSIQYLFSRFDSVSKLA 645
            LA IF SL+  DR +CSLVCRRW  IEGQSR RLSL A+SDL+  I  LF+RFD+V+KLA
Sbjct: 61   LACIFQSLSPSDRQRCSLVCRRWLRIEGQSRHRLSLHAQSDLLPVISALFTRFDAVTKLA 120

Query: 644  LKCDRRSVSIGDEALTLISLGCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSCT 465
            L+CDR+S SIGDEAL  ISL CRNLTRLKLR+CR++TDAGM AFAKNCKGLKKLSCGSCT
Sbjct: 121  LRCDRKSASIGDEALEAISLRCRNLTRLKLRSCRDVTDAGMAAFAKNCKGLKKLSCGSCT 180

Query: 464  FGVKGMNAILDHCSLLEELSVKRLRGLTDGYRAEPIGPGKAALSLKTICLKELYNGQCFG 285
            FG KGMNA+LD+C+ LEELS+KRLRG+TDG  AEPIGPG AA SLKTICLKELYNGQCFG
Sbjct: 181  FGAKGMNAVLDNCASLEELSIKRLRGITDGAAAEPIGPGLAANSLKTICLKELYNGQCFG 240

Query: 284  PLIAGAKNLRSLKLFRCSGDWDVLLESISGRVSGLVEVHLERLQVSDRGLEAISSCLDLE 105
            PLI G+KNLR+LKLFRCSGDWD LL+ IS RV+G+VE+HLERLQVSD GL AIS+CLDLE
Sbjct: 241  PLIIGSKNLRTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDVGLSAISNCLDLE 300

Query: 104  ILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 3
            ILHLVKTPECTN G+ SIA+RCK+LRK+HIDGWK
Sbjct: 301  ILHLVKTPECTNLGLGSIAERCKLLRKLHIDGWK 334


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
           gi|222842891|gb|EEE80438.1| f-box family protein
           [Populus trichocarpa]
          Length = 533

 Score =  455 bits (1171), Expect = e-126
 Identities = 233/332 (70%), Positives = 270/332 (81%), Gaps = 10/332 (3%)
 Frame = -2

Query: 968 MGQSTSTPGMRSVSKRH----QMMNKSTAVIAP------EENLTLVNRDIISDLPDELLA 819
           MGQ+TST  + S    +    +  +K T  I P       E + +   D ISDLPDE LA
Sbjct: 1   MGQTTSTALITSRRDSNLSSQRSKSKFTVPIIPMQVEEQTEYVLVEAPDYISDLPDECLA 60

Query: 818 NIFHSLNSGDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVSSIQYLFSRFDSVSKLALK 639
            IF SL+SGDR  CSLVCRRW  IEGQSR RLSL+A+SDL+  +  LFSRFD+V+KLALK
Sbjct: 61  CIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSLFSRFDAVTKLALK 120

Query: 638 CDRRSVSIGDEALTLISLGCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSCTFG 459
           CDRRSVSIGDEAL  IS+ CRNLTRLKLRACRE+TDAGM AFAKNCK LKK SCGSC FG
Sbjct: 121 CDRRSVSIGDEALVAISIRCRNLTRLKLRACREITDAGMAAFAKNCKALKKFSCGSCAFG 180

Query: 458 VKGMNAILDHCSLLEELSVKRLRGLTDGYRAEPIGPGKAALSLKTICLKELYNGQCFGPL 279
            KGMNA+LD+C+ LE+LSVKRLRG+TDG  AEPIGPG AA SLKTICLKELYNGQCFGPL
Sbjct: 181 AKGMNAMLDNCASLEDLSVKRLRGITDGATAEPIGPGLAAASLKTICLKELYNGQCFGPL 240

Query: 278 IAGAKNLRSLKLFRCSGDWDVLLESISGRVSGLVEVHLERLQVSDRGLEAISSCLDLEIL 99
           I G+KNL++LKLFRCSGDWD LL+ I+ RV+G+VE+HLERLQVSD GL AIS+CL+LEIL
Sbjct: 241 IIGSKNLKTLKLFRCSGDWDKLLQVIADRVTGMVEIHLERLQVSDTGLVAISNCLNLEIL 300

Query: 98  HLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 3
           HLVKTPECT+ G+VSIA+RC++LRK+HIDGWK
Sbjct: 301 HLVKTPECTDIGLVSIAERCRLLRKLHIDGWK 332


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  454 bits (1167), Expect = e-125
 Identities = 236/333 (70%), Positives = 267/333 (80%), Gaps = 11/333 (3%)
 Frame = -2

Query: 968 MGQSTSTPGM---RSVSKRHQMMNKSTAVIAPE--------ENLTLVNRDIISDLPDELL 822
           MGQS S+  +   R  +  H+   KSTA+I+P         + +     D ISDLPDE L
Sbjct: 1   MGQSASSAAILSRRDSNHSHRSKIKSTALISPMHLDETDDVQEIIHGASDFISDLPDECL 60

Query: 821 ANIFHSLNSGDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVSSIQYLFSRFDSVSKLAL 642
           A IF SL+S DR  CSLVCRRWF +EGQSR RLSL A +DL S I  LF+RFD+V+KLAL
Sbjct: 61  ACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHRLSLKAEADLSSMIPSLFTRFDAVTKLAL 120

Query: 641 KCDRRSVSIGDEALTLISLGCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSCTF 462
           KCDRRS SI D++L LISL CRNLTRLKLRACRELTD GM AFAKNCKGLKKLSCGSCTF
Sbjct: 121 KCDRRSTSIRDDSLILISLRCRNLTRLKLRACRELTDVGMAAFAKNCKGLKKLSCGSCTF 180

Query: 461 GVKGMNAILDHCSLLEELSVKRLRGLTDGYRAEPIGPGKAALSLKTICLKELYNGQCFGP 282
           G KGMNA+LD+CS LEELSVKRLRG+TD   AEPIGPG A  SLKTICLK+LYN QCFGP
Sbjct: 181 GAKGMNAVLDNCSALEELSVKRLRGITDS-TAEPIGPGIAGSSLKTICLKDLYNAQCFGP 239

Query: 281 LIAGAKNLRSLKLFRCSGDWDVLLESISGRVSGLVEVHLERLQVSDRGLEAISSCLDLEI 102
           L+ GAK+LR+LKLFRCSGDWD LL  I+ RV+GLVEVHLERLQVSD GL AIS+CLDLEI
Sbjct: 240 LLIGAKSLRTLKLFRCSGDWDALLRVIADRVTGLVEVHLERLQVSDVGLSAISNCLDLEI 299

Query: 101 LHLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 3
           LHLVKTPECTN GIV++A+RCK+LRK+HIDGWK
Sbjct: 300 LHLVKTPECTNLGIVALAERCKLLRKLHIDGWK 332


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score =  448 bits (1152), Expect = e-123
 Identities = 235/335 (70%), Positives = 267/335 (79%), Gaps = 13/335 (3%)
 Frame = -2

Query: 968  MGQSTSTPGMRSVSKR------HQMMNKSTAVIAP---EENLTL----VNRDIISDLPDE 828
            MGQS ST  + S S R      H+  +KS   I     EEN+       + D ISDLPDE
Sbjct: 1    MGQSASTSAISSGSSRRGSNHPHRSRSKSMVQIPSMQVEENVQFRQIDEDLDYISDLPDE 60

Query: 827  LLANIFHSLNSGDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVSSIQYLFSRFDSVSKL 648
             LA IF SL SGDR +CSLVCRRW  IEGQ+R RLSL+A SDL++ +  LFSRFD+V+KL
Sbjct: 61   CLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHRLSLNAHSDLLTVVPSLFSRFDAVTKL 120

Query: 647  ALKCDRRSVSIGDEALTLISLGCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSC 468
            ALKCDRRSVSIGD+AL LISLGCRNLTRLKLRACRELTDAGM  FAKNCKGLKKLSCGSC
Sbjct: 121  ALKCDRRSVSIGDDALILISLGCRNLTRLKLRACRELTDAGMGVFAKNCKGLKKLSCGSC 180

Query: 467  TFGVKGMNAILDHCSLLEELSVKRLRGLTDGYRAEPIGPGKAALSLKTICLKELYNGQCF 288
            TFG KGM+A+LD+CS LEELSVKRLRG++DG   + IGPG AA SLKTICLKE YNGQCF
Sbjct: 181  TFGAKGMSAVLDNCSALEELSVKRLRGISDGSAVDQIGPGVAASSLKTICLKEQYNGQCF 240

Query: 287  GPLIAGAKNLRSLKLFRCSGDWDVLLESISGRVSGLVEVHLERLQVSDRGLEAISSCLDL 108
             PLI GAKNLR+LKLFRCSGD D LL+ ++ R + +VE+HLERLQVSD GL AIS  LDL
Sbjct: 241  WPLIIGAKNLRTLKLFRCSGDCDNLLQLVANRTTSMVEIHLERLQVSDLGLVAISHFLDL 300

Query: 107  EILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 3
            EILHLVKT ECTNAG+VS+A+RCK+LRK+HIDGWK
Sbjct: 301  EILHLVKTSECTNAGLVSVAERCKLLRKLHIDGWK 335