BLASTX nr result

ID: Coptis21_contig00017126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017126
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   169   3e-40
emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]   169   4e-40
ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   161   9e-38
ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|22...   161   9e-38
gb|AAX33321.1| secondary cell wall-related glycosyltransferase f...   147   1e-33

>ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase [Vitis
           vinifera]
          Length = 488

 Score =  169 bits (429), Expect = 3e-40
 Identities = 93/185 (50%), Positives = 118/185 (63%), Gaps = 3/185 (1%)
 Frame = -2

Query: 548 MADRNSPHLVGSISRKXXXXXXXXXXXXXXXXXXXXFRSTGHPHFIDHSLLPNSKLFSVI 369
           MA+RN+  L G ++R                      RSTG P FIDHSLLPNSKLF+V 
Sbjct: 1   MAERNASPL-GFVTRNSLLCLFSVASILFILSWLSVLRSTGRPRFIDHSLLPNSKLFAVT 59

Query: 368 ENNDS---SDNDIQLSSLHNPSYKVDDREVDPQENAGVICKSSKVPLKVFMYDMPPEFHF 198
           +N +S   + NDI+      PS + +++ ++ + +  V C S+   LKVFMYD+P EFHF
Sbjct: 60  DNGNSESQNQNDIE------PSIESEEKALEGKNS--VKCGSNYPVLKVFMYDLPAEFHF 111

Query: 197 ALLDWKAQGDSVWPDIKVKIPDYPGGLNLQHSIEYWLTLDLLSSSFRDQNSGSSAVRVLN 18
            LLDW   G+SVWPDI+ K P YPGGLNLQHSIEYWLTLDLLSS F +  +  +A+RV N
Sbjct: 112 GLLDWAPAGESVWPDIRTKFPLYPGGLNLQHSIEYWLTLDLLSSEFPENQNARAAIRVHN 171

Query: 17  SSEAD 3
           SSEAD
Sbjct: 172 SSEAD 176


>emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]
          Length = 488

 Score =  169 bits (427), Expect = 4e-40
 Identities = 93/185 (50%), Positives = 117/185 (63%), Gaps = 3/185 (1%)
 Frame = -2

Query: 548 MADRNSPHLVGSISRKXXXXXXXXXXXXXXXXXXXXFRSTGHPHFIDHSLLPNSKLFSVI 369
           MA+RN+  L G ++R                      RSTG P FIDHSLLPNSKLF+V 
Sbjct: 1   MAERNASPL-GFVTRNSLLCLFSVASILFILSWLSVLRSTGRPRFIDHSLLPNSKLFAVT 59

Query: 368 ENNDS---SDNDIQLSSLHNPSYKVDDREVDPQENAGVICKSSKVPLKVFMYDMPPEFHF 198
           +N +S   + NDI+      PS + +++ ++ + +  V C S+   LKVFMYD+P EFHF
Sbjct: 60  DNGNSESQNQNDIE------PSIESEEKALEGKNS--VKCGSNYPVLKVFMYDLPAEFHF 111

Query: 197 ALLDWKAQGDSVWPDIKVKIPDYPGGLNLQHSIEYWLTLDLLSSSFRDQNSGSSAVRVLN 18
            LLDW   G+SVWPDI+ K P YPGGLNLQHSIEYWLTLDLLSS F +  +   A+RV N
Sbjct: 112 GLLDWAPAGESVWPDIRTKFPLYPGGLNLQHSIEYWLTLDLLSSEFPENQNARXAIRVHN 171

Query: 17  SSEAD 3
           SSEAD
Sbjct: 172 SSEAD 176


>ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 509

 Score =  161 bits (407), Expect = 9e-38
 Identities = 88/197 (44%), Positives = 112/197 (56%), Gaps = 15/197 (7%)
 Frame = -2

Query: 548 MADRNSPHLVGSISRKXXXXXXXXXXXXXXXXXXXXFRSTGHPHFIDHSLLPNSKLFSVI 369
           MA+R     +  +SRK                     RST  PHFIDH+LLPNSKLFS +
Sbjct: 1   MAERIGASSLKVVSRKSLLFFFIMTSVLFIMSWFFVLRSTSRPHFIDHNLLPNSKLFSTL 60

Query: 368 ENNDSSDNDIQL-SSLHNPSYKVDDREVDPQENA-------------GVIC-KSSKVPLK 234
           + + S      + SS  N +  VD  +V+                  G  C ++ +V LK
Sbjct: 61  DGSKSHMQKQNVESSFGNRAILVDSEDVEEASETKARNGKEKLVKHDGKKCNRNDEVVLK 120

Query: 233 VFMYDMPPEFHFALLDWKAQGDSVWPDIKVKIPDYPGGLNLQHSIEYWLTLDLLSSSFRD 54
           VFMYD+PPEFHF LLDWK  G+SVWPD++  IP YPGGLNLQHSIE+WLTLD+L+S F  
Sbjct: 121 VFMYDLPPEFHFGLLDWKPSGNSVWPDVRTNIPGYPGGLNLQHSIEFWLTLDILASEFPQ 180

Query: 53  QNSGSSAVRVLNSSEAD 3
            +   + +RV NSSEAD
Sbjct: 181 ASKARTVIRVQNSSEAD 197


>ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|223529463|gb|EEF31420.1|
           catalytic, putative [Ricinus communis]
          Length = 512

 Score =  161 bits (407), Expect = 9e-38
 Identities = 97/197 (49%), Positives = 115/197 (58%), Gaps = 15/197 (7%)
 Frame = -2

Query: 548 MADRNSPHLVGSISRKXXXXXXXXXXXXXXXXXXXXFRSTGHPHFIDHSLLPNSKLFSVI 369
           MA+++S  LV  ISRK                     RSTG P+FID SL+ N+ L+S+I
Sbjct: 1   MAEKHSSSLV-VISRKSLFGLFSFVLVLFILSWFFVLRSTGRPNFIDGSLI-NNPLYSII 58

Query: 368 ENNDS------------SDNDIQLSSLHNPSYKVDDREVD---PQENAGVICKSSKVPLK 234
           +N               S  + Q  +   P  KVD ++V    P EN        K PLK
Sbjct: 59  DNGSDAPSIGSRATLADSRGEGQEEAEETPQEKVDVKDVKCNTPLENR-------KEPLK 111

Query: 233 VFMYDMPPEFHFALLDWKAQGDSVWPDIKVKIPDYPGGLNLQHSIEYWLTLDLLSSSFRD 54
           VFMYD+PPEFHF LLDWKAQGDSVWPD++ KIP YPGGLNLQHSIEYWLTLDLL+S    
Sbjct: 112 VFMYDLPPEFHFELLDWKAQGDSVWPDLRTKIPGYPGGLNLQHSIEYWLTLDLLASEISG 171

Query: 53  QNSGSSAVRVLNSSEAD 3
                SA+RV NSSEAD
Sbjct: 172 IPRAGSAIRVRNSSEAD 188


>gb|AAX33321.1| secondary cell wall-related glycosyltransferase family 47 [Populus
           tremula x Populus tremuloides]
          Length = 509

 Score =  147 bits (371), Expect = 1e-33
 Identities = 92/198 (46%), Positives = 113/198 (57%), Gaps = 16/198 (8%)
 Frame = -2

Query: 548 MADRNSPHLVGSISRKXXXXXXXXXXXXXXXXXXXXFRSTGHPHFIDHSLLPNSKLFSVI 369
           MA+++S   +G ISRK                     RSTG   FID SLLP+ K  SVI
Sbjct: 1   MAEKHSSSSLGVISRKSMFCLFSLVSALFILSWFLMLRSTGSAGFIDLSLLPHPKPNSVI 60

Query: 368 ENNDSSD---NDIQLSSLHNPSYKV------DDREVDPQEN---AGVIC----KSSKVPL 237
           +  +S+    ND++  S+ N +  +      D  E  P+E      V C    K+    L
Sbjct: 61  DIGNSASWNRNDVE-PSIGNRARAIPVDNEGDGGEEKPREKDDLGDVKCNSFDKNCNQVL 119

Query: 236 KVFMYDMPPEFHFALLDWKAQGDSVWPDIKVKIPDYPGGLNLQHSIEYWLTLDLLSSSFR 57
           KVFMYD+P EFHF LLDWK QG SVWPD++ K+P YPGGLNLQHSIEYWLT+DLL+S   
Sbjct: 120 KVFMYDLPSEFHFGLLDWKPQGGSVWPDLRAKVPAYPGGLNLQHSIEYWLTMDLLASEVP 179

Query: 56  DQNSGSSAVRVLNSSEAD 3
                 SAVRV NSSEAD
Sbjct: 180 GIPRAGSAVRVQNSSEAD 197


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