BLASTX nr result

ID: Coptis21_contig00017113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017113
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283014.1| PREDICTED: uncharacterized protein LOC100265...   110   9e-23
ref|XP_002513453.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
ref|XP_003539057.1| PREDICTED: uncharacterized protein LOC100779...    94   2e-17
ref|XP_003592458.1| hypothetical protein MTR_1g105180, partial [...    87   1e-15
ref|XP_003539397.1| PREDICTED: uncharacterized protein LOC100814...    86   2e-15

>ref|XP_002283014.1| PREDICTED: uncharacterized protein LOC100265521 [Vitis vinifera]
           gi|297746366|emb|CBI16422.3| unnamed protein product
           [Vitis vinifera]
          Length = 591

 Score =  110 bits (276), Expect = 9e-23
 Identities = 73/164 (44%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
 Frame = -3

Query: 487 EYWDGFGLAGRNNGGEGDFFDGKCDFTSSRKGXXXXXXXXXSFSRELQSYPAEEDHKSIS 308
           E WD  GL G +N  E    D K +  SSRKG           S E    P E D KS++
Sbjct: 101 ESWDMEGLGGNDN--ETIMSDYKKEI-SSRKGLPSGLV-----SLEPHVCPTE-DQKSLT 151

Query: 307 SSCTNHITVLQTSPGVDIIKSSRRNASMDLKSITTCNNCKPATISSETE--ICNKVGKNL 134
           S+C NHITVLQTSPG D  KSSRRN+  + KS+++CN C+PA IS+E E  + N  G + 
Sbjct: 152 SACANHITVLQTSPGTDFFKSSRRNSLGEFKSLSSCNKCRPAIISTEAENTVKNSKGSSF 211

Query: 133 IXXXXXXXXXXXXXXXXSKNKGPLLSRLFPRLRKKNKSEASPNR 2
           +                 KN+G  LS LFPRL+KK+K+E+SPNR
Sbjct: 212 V---VPLTDSHSSVQSQPKNRGVSLSWLFPRLKKKHKNESSPNR 252


>ref|XP_002513453.1| conserved hypothetical protein [Ricinus communis]
           gi|223547361|gb|EEF48856.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 598

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
 Frame = -3

Query: 487 EYWDGFGLAGRNNGGEGDFFDGKCDFTSSRKGXXXXXXXXXSFSRELQSYPAEEDHKSIS 308
           E WD +G+   +   E    D K D   S KG           S E    PAE D KS++
Sbjct: 104 ESWDEYGIEAGSTY-ETVLSDYKKDSLISGKGIPSGLA-----SLEPHICPAE-DQKSVT 156

Query: 307 SSCTNHITVLQTS-PGVDIIKSSRRNASMDLKSITTCNNCKPATISSETEICNKVGKNLI 131
            S  N+ITVL TS PG +  +SSRRN+  D KS ++CN CKPATI+SE+E  +K  KN  
Sbjct: 157 GSSANNITVLHTSSPGTEFYRSSRRNSLADFKSASSCNRCKPATIASESEYASKNSKN-S 215

Query: 130 XXXXXXXXXXXXXXXXSKNKGPLLSRLFPRLRKKNKSEASPNR 2
                            +N+G ++S LFP+L+KK+K+E SPN+
Sbjct: 216 NIVVPWTDSHSSVQSQPRNRGGVMSWLFPKLKKKHKTENSPNQ 258


>ref|XP_003539057.1| PREDICTED: uncharacterized protein LOC100779911 [Glycine max]
          Length = 588

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 67/163 (41%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
 Frame = -3

Query: 487 EYWDGFGLAGRNNGGEGDFFDGKCDFTSSRKGXXXXXXXXXSFSRELQSYPAEEDHKSIS 308
           E WDG  L G NN  +    D K + +SSRKG          F+         ED KS++
Sbjct: 103 ESWDGSMLEGGNNI-DNIVADYK-ERSSSRKGLYAG------FANLESHICPTEDTKSVT 154

Query: 307 SSCTNHITVLQTSPGVDIIKSSRRNASMDLKSITTCNNCKPATISSETEIC-NKVGKNLI 131
            S  N ITVLQTSP  D  K  RRN+  D KS+++CN C PAT++SE E   N    N++
Sbjct: 155 GSSANQITVLQTSPPKDYFKCRRRNSMEDFKSVSSCNKCNPATLTSEFENARNSKSSNIV 214

Query: 130 XXXXXXXXXXXXXXXXSKNKGPLLSRLFPRLRKKNKSEASPNR 2
                           +KNKG ++S LFPRL+KK+K+E SPNR
Sbjct: 215 ---VQVTDSRSSLQSQTKNKG-VISWLFPRLKKKHKNENSPNR 253


>ref|XP_003592458.1| hypothetical protein MTR_1g105180, partial [Medicago truncatula]
           gi|355481506|gb|AES62709.1| hypothetical protein
           MTR_1g105180, partial [Medicago truncatula]
          Length = 270

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/110 (44%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
 Frame = -3

Query: 328 EDHKSISSSCTNHITVLQTSPGVDIIKSSRRNASMDLKSITTCNNCKPATISSETEIC-N 152
           +D KS++ SC NHITVLQTSP  +  +  RRN+  D KS+++CN C PA I+SE E   N
Sbjct: 147 DDTKSVTGSCANHITVLQTSPTNESYRCKRRNSLEDSKSVSSCNKCNPAIITSELESARN 206

Query: 151 KVGKNLIXXXXXXXXXXXXXXXXSKNKGPLLSRLFPRLRKKNKSEASPNR 2
               N++                +K+KG ++S LFPRL+KK+K+E SPNR
Sbjct: 207 SKSSNIV---VPATDSHSSFQSETKSKG-VISWLFPRLKKKHKNENSPNR 252


>ref|XP_003539397.1| PREDICTED: uncharacterized protein LOC100814681 [Glycine max]
          Length = 589

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 65/165 (39%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
 Frame = -3

Query: 487 EYWDGFGLAGRNNGGE-GDFFDGKCDFTSSRKGXXXXXXXXXSFSRELQSYPAEEDHKSI 311
           E WDG  L G N+      ++ GK   +SSRKG          F+         ED KS+
Sbjct: 103 ESWDGSVLEGGNSVENIVAYYKGK---SSSRKGLYAG------FANLESHICPTEDTKSV 153

Query: 310 SSSCTNHITVLQTSPGVD-IIKSSRRNASMDLKSITTCNNCKPATISSETEIC-NKVGKN 137
           + S  N ITVLQTSP  D   K  RRN+  D KS ++CN C PAT++SE E   N    N
Sbjct: 154 TGSSANQITVLQTSPANDDFFKCRRRNSMEDFKSASSCNKCNPATLTSEFENARNSKSSN 213

Query: 136 LIXXXXXXXXXXXXXXXXSKNKGPLLSRLFPRLRKKNKSEASPNR 2
           ++                 K+KG ++S LFPRL+KK+K+E SPNR
Sbjct: 214 IV---VPVTDSHSSLQSQPKSKG-VISWLFPRLKKKHKNENSPNR 254


Top