BLASTX nr result
ID: Coptis21_contig00017073
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017073 (453 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276201.1| PREDICTED: uncharacterized protein LOC100259... 49 1e-11 ref|XP_002523000.1| conserved hypothetical protein [Ricinus comm... 47 3e-09 ref|XP_004157185.1| PREDICTED: uncharacterized LOC101210672 [Cuc... 44 4e-09 ref|XP_004140752.1| PREDICTED: uncharacterized protein LOC101210... 44 4e-09 ref|NP_001140331.1| uncharacterized protein LOC100272378 [Zea ma... 45 4e-08 >ref|XP_002276201.1| PREDICTED: uncharacterized protein LOC100259501 [Vitis vinifera] gi|297734203|emb|CBI15450.3| unnamed protein product [Vitis vinifera] Length = 385 Score = 48.5 bits (114), Expect(2) = 1e-11 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 8/63 (12%) Frame = -3 Query: 451 RRDVKLLCSAGLEEILNY-FQAMKNKSPI-------SSKKRKVDIDKHHLQRRLLGVARL 296 RRD+KLL SA LEE+L+ FQ + K P S KKRK D K++ RLLG ARL Sbjct: 50 RRDLKLLQSANLEELLSSCFQVIHGKKPQQKVHLLESLKKRKGDGGKYNFMERLLGAARL 109 Query: 295 LSQ 287 LS+ Sbjct: 110 LSE 112 Score = 45.8 bits (107), Expect(2) = 1e-11 Identities = 21/29 (72%), Positives = 27/29 (93%) Frame = -1 Query: 204 RLLSQMVEPMIKAAIVLASLLARAFFTGF 118 RLLS+MVEPM+KAAI +++LLAR+FF GF Sbjct: 108 RLLSEMVEPMLKAAIEISTLLARSFFMGF 136 >ref|XP_002523000.1| conserved hypothetical protein [Ricinus communis] gi|223537812|gb|EEF39430.1| conserved hypothetical protein [Ricinus communis] Length = 394 Score = 46.6 bits (109), Expect(2) = 3e-09 Identities = 22/29 (75%), Positives = 27/29 (93%) Frame = -1 Query: 204 RLLSQMVEPMIKAAIVLASLLARAFFTGF 118 RLLSQMVEPM+KAAI +++LLAR+FF GF Sbjct: 108 RLLSQMVEPMLKAAIEVSTLLARSFFMGF 136 Score = 39.7 bits (91), Expect(2) = 3e-09 Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 8/63 (12%) Frame = -3 Query: 451 RRDVKLLCSAGLEEIL-NYFQAMKNKSPI-------SSKKRKVDIDKHHLQRRLLGVARL 296 RRD++LL SA LEE+L + F + K P S K RK D + RLLG ARL Sbjct: 50 RRDLRLLQSAKLEELLGSCFHVITGKKPKQKVHLLESLKWRKCDHGVPNFMERLLGAARL 109 Query: 295 LSQ 287 LSQ Sbjct: 110 LSQ 112 >ref|XP_004157185.1| PREDICTED: uncharacterized LOC101210672 [Cucumis sativus] Length = 394 Score = 44.3 bits (103), Expect(2) = 4e-09 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Frame = -3 Query: 451 RRDVKLLCSAGLEEILNY-FQAMKNKSPI-------SSKKRKVDIDKHHLQRRLLGVARL 296 RRD++LL + LEE+L+ FQ + K P S K+RK ++ K++ RLLG RL Sbjct: 55 RRDLRLLQAVKLEELLSSCFQVIDGKKPKQKIHFLESLKRRKCEVGKYNFMERLLGAVRL 114 Query: 295 LSQ 287 LSQ Sbjct: 115 LSQ 117 Score = 41.2 bits (95), Expect(2) = 4e-09 Identities = 20/29 (68%), Positives = 23/29 (79%) Frame = -1 Query: 204 RLLSQMVEPMIKAAIVLASLLARAFFTGF 118 RLLSQMVEP+ KAA ++ LLAR FF GF Sbjct: 113 RLLSQMVEPIFKAATEISILLARTFFPGF 141 >ref|XP_004140752.1| PREDICTED: uncharacterized protein LOC101210672 [Cucumis sativus] Length = 394 Score = 44.3 bits (103), Expect(2) = 4e-09 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Frame = -3 Query: 451 RRDVKLLCSAGLEEILNY-FQAMKNKSPI-------SSKKRKVDIDKHHLQRRLLGVARL 296 RRD++LL + LEE+L+ FQ + K P S K+RK ++ K++ RLLG RL Sbjct: 55 RRDLRLLQAVKLEELLSSCFQVIDGKKPKQKIHFLESLKRRKCEVGKYNFMERLLGAVRL 114 Query: 295 LSQ 287 LSQ Sbjct: 115 LSQ 117 Score = 41.2 bits (95), Expect(2) = 4e-09 Identities = 20/29 (68%), Positives = 23/29 (79%) Frame = -1 Query: 204 RLLSQMVEPMIKAAIVLASLLARAFFTGF 118 RLLSQMVEP+ KAA ++ LLAR FF GF Sbjct: 113 RLLSQMVEPIFKAATEISILLARTFFPGF 141 >ref|NP_001140331.1| uncharacterized protein LOC100272378 [Zea mays] gi|194699028|gb|ACF83598.1| unknown [Zea mays] Length = 247 Score = 45.4 bits (106), Expect(2) = 4e-08 Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 9/64 (14%) Frame = -3 Query: 451 RRDVKLLCSAGLEEILN-YFQAMKNKSPIS--------SKKRKVDIDKHHLQRRLLGVAR 299 RRD+KLL AGL E+LN F + + P + SKK+ V HH +RLLGVAR Sbjct: 57 RRDLKLLLGAGLAEVLNAVFPVLACRKPANTILVPNKQSKKKPVANHSHH--QRLLGVAR 114 Query: 298 LLSQ 287 LLSQ Sbjct: 115 LLSQ 118 Score = 37.0 bits (84), Expect(2) = 4e-08 Identities = 18/26 (69%), Positives = 22/26 (84%) Frame = -1 Query: 204 RLLSQMVEPMIKAAIVLASLLARAFF 127 RLLSQM EP++KAAI + LLAR+FF Sbjct: 114 RLLSQMSEPVMKAAIQITFLLARSFF 139