BLASTX nr result

ID: Coptis21_contig00017073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017073
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276201.1| PREDICTED: uncharacterized protein LOC100259...    49   1e-11
ref|XP_002523000.1| conserved hypothetical protein [Ricinus comm...    47   3e-09
ref|XP_004157185.1| PREDICTED: uncharacterized LOC101210672 [Cuc...    44   4e-09
ref|XP_004140752.1| PREDICTED: uncharacterized protein LOC101210...    44   4e-09
ref|NP_001140331.1| uncharacterized protein LOC100272378 [Zea ma...    45   4e-08

>ref|XP_002276201.1| PREDICTED: uncharacterized protein LOC100259501 [Vitis vinifera]
           gi|297734203|emb|CBI15450.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score = 48.5 bits (114), Expect(2) = 1e-11
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
 Frame = -3

Query: 451 RRDVKLLCSAGLEEILNY-FQAMKNKSPI-------SSKKRKVDIDKHHLQRRLLGVARL 296
           RRD+KLL SA LEE+L+  FQ +  K P        S KKRK D  K++   RLLG ARL
Sbjct: 50  RRDLKLLQSANLEELLSSCFQVIHGKKPQQKVHLLESLKKRKGDGGKYNFMERLLGAARL 109

Query: 295 LSQ 287
           LS+
Sbjct: 110 LSE 112



 Score = 45.8 bits (107), Expect(2) = 1e-11
 Identities = 21/29 (72%), Positives = 27/29 (93%)
 Frame = -1

Query: 204 RLLSQMVEPMIKAAIVLASLLARAFFTGF 118
           RLLS+MVEPM+KAAI +++LLAR+FF GF
Sbjct: 108 RLLSEMVEPMLKAAIEISTLLARSFFMGF 136


>ref|XP_002523000.1| conserved hypothetical protein [Ricinus communis]
           gi|223537812|gb|EEF39430.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 394

 Score = 46.6 bits (109), Expect(2) = 3e-09
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = -1

Query: 204 RLLSQMVEPMIKAAIVLASLLARAFFTGF 118
           RLLSQMVEPM+KAAI +++LLAR+FF GF
Sbjct: 108 RLLSQMVEPMLKAAIEVSTLLARSFFMGF 136



 Score = 39.7 bits (91), Expect(2) = 3e-09
 Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
 Frame = -3

Query: 451 RRDVKLLCSAGLEEIL-NYFQAMKNKSPI-------SSKKRKVDIDKHHLQRRLLGVARL 296
           RRD++LL SA LEE+L + F  +  K P        S K RK D    +   RLLG ARL
Sbjct: 50  RRDLRLLQSAKLEELLGSCFHVITGKKPKQKVHLLESLKWRKCDHGVPNFMERLLGAARL 109

Query: 295 LSQ 287
           LSQ
Sbjct: 110 LSQ 112


>ref|XP_004157185.1| PREDICTED: uncharacterized LOC101210672 [Cucumis sativus]
          Length = 394

 Score = 44.3 bits (103), Expect(2) = 4e-09
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
 Frame = -3

Query: 451 RRDVKLLCSAGLEEILNY-FQAMKNKSPI-------SSKKRKVDIDKHHLQRRLLGVARL 296
           RRD++LL +  LEE+L+  FQ +  K P        S K+RK ++ K++   RLLG  RL
Sbjct: 55  RRDLRLLQAVKLEELLSSCFQVIDGKKPKQKIHFLESLKRRKCEVGKYNFMERLLGAVRL 114

Query: 295 LSQ 287
           LSQ
Sbjct: 115 LSQ 117



 Score = 41.2 bits (95), Expect(2) = 4e-09
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = -1

Query: 204 RLLSQMVEPMIKAAIVLASLLARAFFTGF 118
           RLLSQMVEP+ KAA  ++ LLAR FF GF
Sbjct: 113 RLLSQMVEPIFKAATEISILLARTFFPGF 141


>ref|XP_004140752.1| PREDICTED: uncharacterized protein LOC101210672 [Cucumis sativus]
          Length = 394

 Score = 44.3 bits (103), Expect(2) = 4e-09
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
 Frame = -3

Query: 451 RRDVKLLCSAGLEEILNY-FQAMKNKSPI-------SSKKRKVDIDKHHLQRRLLGVARL 296
           RRD++LL +  LEE+L+  FQ +  K P        S K+RK ++ K++   RLLG  RL
Sbjct: 55  RRDLRLLQAVKLEELLSSCFQVIDGKKPKQKIHFLESLKRRKCEVGKYNFMERLLGAVRL 114

Query: 295 LSQ 287
           LSQ
Sbjct: 115 LSQ 117



 Score = 41.2 bits (95), Expect(2) = 4e-09
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = -1

Query: 204 RLLSQMVEPMIKAAIVLASLLARAFFTGF 118
           RLLSQMVEP+ KAA  ++ LLAR FF GF
Sbjct: 113 RLLSQMVEPIFKAATEISILLARTFFPGF 141


>ref|NP_001140331.1| uncharacterized protein LOC100272378 [Zea mays]
           gi|194699028|gb|ACF83598.1| unknown [Zea mays]
          Length = 247

 Score = 45.4 bits (106), Expect(2) = 4e-08
 Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 9/64 (14%)
 Frame = -3

Query: 451 RRDVKLLCSAGLEEILN-YFQAMKNKSPIS--------SKKRKVDIDKHHLQRRLLGVAR 299
           RRD+KLL  AGL E+LN  F  +  + P +        SKK+ V    HH  +RLLGVAR
Sbjct: 57  RRDLKLLLGAGLAEVLNAVFPVLACRKPANTILVPNKQSKKKPVANHSHH--QRLLGVAR 114

Query: 298 LLSQ 287
           LLSQ
Sbjct: 115 LLSQ 118



 Score = 37.0 bits (84), Expect(2) = 4e-08
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -1

Query: 204 RLLSQMVEPMIKAAIVLASLLARAFF 127
           RLLSQM EP++KAAI +  LLAR+FF
Sbjct: 114 RLLSQMSEPVMKAAIQITFLLARSFF 139


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