BLASTX nr result
ID: Coptis21_contig00017062
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00017062
(566 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263... 280 2e-73
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab... 272 2e-71
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat... 272 3e-71
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from... 268 6e-70
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic ... 268 6e-70
>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
Length = 2002
Score = 280 bits (715), Expect = 2e-73
Identities = 140/188 (74%), Positives = 160/188 (85%), Gaps = 1/188 (0%)
Frame = +2
Query: 5 DPDILMGWEIQGGSLGFLAERAAHLGILLLSTISRTPS-CETEARNSATGEIRVQDDLLP 181
DPDIL+GW+IQGGSLGFLAERA+HLGI LL+ ISRTPS +T +RN E RV D++LP
Sbjct: 400 DPDILIGWDIQGGSLGFLAERASHLGIGLLNKISRTPSETKTASRNFEIPEKRVADEMLP 459
Query: 182 EALVTDPAVFGNTIIEDEWGRTHASGVHVGGRIVLNIWRLMRGEVKLNMYTMEAVAEEVL 361
E LV D + IIEDEWGRTHASGVHVGGRIVLN+WRLMRGE+KLNMYT E+VAE VL
Sbjct: 460 ENLVDDSVLLEEAIIEDEWGRTHASGVHVGGRIVLNVWRLMRGEIKLNMYTAESVAEAVL 519
Query: 362 RRKVPLIPPRILAQWFSSGPGRARFRCIEYIIERTKLNLEIMDQLDMINRTSELARVFGI 541
R+K+P I R+L +WFSSGPGRAR+R IEY+I+R KLN EIM+QLDMINRTSELARVFGI
Sbjct: 520 RQKIPSIRNRVLTKWFSSGPGRARYRSIEYVIQRAKLNFEIMNQLDMINRTSELARVFGI 579
Query: 542 DFFSVLSR 565
DFFSVLSR
Sbjct: 580 DFFSVLSR 587
>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
Length = 1899
Score = 272 bits (696), Expect = 2e-71
Identities = 134/187 (71%), Positives = 156/187 (83%)
Frame = +2
Query: 5 DPDILMGWEIQGGSLGFLAERAAHLGILLLSTISRTPSCETEARNSATGEIRVQDDLLPE 184
DPDIL+GW+IQGGS+GFLAERAA LGI L+ ISRTPS T RN + + ++ +LLP+
Sbjct: 1127 DPDILLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTT--RNDSDNKRKLGKNLLPD 1184
Query: 185 ALVTDPAVFGNTIIEDEWGRTHASGVHVGGRIVLNIWRLMRGEVKLNMYTMEAVAEEVLR 364
LV DPA +IEDEWGRTHASGVHVGGRIVLN WRL+RGEVKLNMYT+EAV+E VLR
Sbjct: 1185 PLVADPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLR 1244
Query: 365 RKVPLIPPRILAQWFSSGPGRARFRCIEYIIERTKLNLEIMDQLDMINRTSELARVFGID 544
+K+P IP ++L +WFSSGP AR+RCIEY++ RT LNLEIM QLDMINRTSELARVFGID
Sbjct: 1245 QKIPSIPYKVLTEWFSSGPAGARYRCIEYVVRRTNLNLEIMSQLDMINRTSELARVFGID 1304
Query: 545 FFSVLSR 565
FFSVLSR
Sbjct: 1305 FFSVLSR 1311
>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
gi|223548348|gb|EEF49839.1| DNA polymerase zeta
catalytic subunit, putative [Ricinus communis]
Length = 2066
Score = 272 bits (695), Expect = 3e-71
Identities = 135/188 (71%), Positives = 156/188 (82%), Gaps = 1/188 (0%)
Frame = +2
Query: 5 DPDILMGWEIQGGSLGFLAERAAHLGILLLSTISRTP-SCETEARNSATGEIRVQDDLLP 181
DPDILMGW+IQGGSLGFLAERAAHLG+ LL+ ISRTP AR + + + +L
Sbjct: 421 DPDILMGWDIQGGSLGFLAERAAHLGMGLLNNISRTPLEANIGARETEISDKEILATMLD 480
Query: 182 EALVTDPAVFGNTIIEDEWGRTHASGVHVGGRIVLNIWRLMRGEVKLNMYTMEAVAEEVL 361
E+LV + A+ +IEDEWGRTHASGVHVGGRIVLNIWRL+R EVKLN+YT+EAV E VL
Sbjct: 481 ESLVAESALVEQAVIEDEWGRTHASGVHVGGRIVLNIWRLIRNEVKLNLYTVEAVGEAVL 540
Query: 362 RRKVPLIPPRILAQWFSSGPGRARFRCIEYIIERTKLNLEIMDQLDMINRTSELARVFGI 541
RRK+P IP R+L +WFSSGPGRAR+RCIEY++ R KLNLEIM+QLDMINRTSELARVFGI
Sbjct: 541 RRKIPSIPYRVLTKWFSSGPGRARYRCIEYMVHRAKLNLEIMNQLDMINRTSELARVFGI 600
Query: 542 DFFSVLSR 565
DFFSVLSR
Sbjct: 601 DFFSVLSR 608
>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 268 bits (684), Expect = 6e-70
Identities = 132/187 (70%), Positives = 156/187 (83%)
Frame = +2
Query: 5 DPDILMGWEIQGGSLGFLAERAAHLGILLLSTISRTPSCETEARNSATGEIRVQDDLLPE 184
DPD+L+GW+IQGGS+GFLAERAA LGI L+ ISRTPS T N++ + ++ ++LLP+
Sbjct: 1122 DPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTT--NNSDNKRKLGNNLLPD 1179
Query: 185 ALVTDPAVFGNTIIEDEWGRTHASGVHVGGRIVLNIWRLMRGEVKLNMYTMEAVAEEVLR 364
LV +PA +IEDEWGRTHASGVHVGGRIVLN WRL+RGEVKLNMYT+EAV+E VLR
Sbjct: 1180 PLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLR 1239
Query: 365 RKVPLIPPRILAQWFSSGPGRARFRCIEYIIERTKLNLEIMDQLDMINRTSELARVFGID 544
+KVP IP ++L +WFSSGP AR+RCIEY+I R LNLEIM QLDMINRTSELARVFGID
Sbjct: 1240 QKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFGID 1299
Query: 545 FFSVLSR 565
FFSVLSR
Sbjct: 1300 FFSVLSR 1306
>gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
Length = 1871
Score = 268 bits (684), Expect = 6e-70
Identities = 132/187 (70%), Positives = 156/187 (83%)
Frame = +2
Query: 5 DPDILMGWEIQGGSLGFLAERAAHLGILLLSTISRTPSCETEARNSATGEIRVQDDLLPE 184
DPD+L+GW+IQGGS+GFLAERAA LGI L+ ISRTPS T N++ + ++ ++LLP+
Sbjct: 1122 DPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTT--NNSDNKRKLGNNLLPD 1179
Query: 185 ALVTDPAVFGNTIIEDEWGRTHASGVHVGGRIVLNIWRLMRGEVKLNMYTMEAVAEEVLR 364
LV +PA +IEDEWGRTHASGVHVGGRIVLN WRL+RGEVKLNMYT+EAV+E VLR
Sbjct: 1180 PLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLR 1239
Query: 365 RKVPLIPPRILAQWFSSGPGRARFRCIEYIIERTKLNLEIMDQLDMINRTSELARVFGID 544
+KVP IP ++L +WFSSGP AR+RCIEY+I R LNLEIM QLDMINRTSELARVFGID
Sbjct: 1240 QKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFGID 1299
Query: 545 FFSVLSR 565
FFSVLSR
Sbjct: 1300 FFSVLSR 1306