BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017050
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   202   7e-50
ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|2...   168   1e-39
ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|2...   162   8e-38
ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   154   2e-35
ref|XP_002526304.1| conserved hypothetical protein [Ricinus comm...   151   2e-34

>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
          Length = 162

 Score =  202 bits (514), Expect = 7e-50
 Identities = 106/170 (62%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
 Frame = +3

Query: 57  MGLYSNLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFDSLGDAVATEGLFS 236
           MGL S LND S +SIPL LV  IANCV Y+RSL+ G+ Q MG SRFD+  D V  +GL  
Sbjct: 1   MGLQSQLNDVSSDSIPLLLVAIIANCVAYIRSLLLGLFQSMGLSRFDA--DEVE-DGLLG 57

Query: 237 VMSSGLARLIMVSEQSNMSRVFCYK-SEDRVAESTYPDNCVVCLCRLTDGEQVRSLACRH 413
            + SGLA LI+++EQ N++RVF Y+  ED  A S    +CVVCLCRL DG+QVR LACRH
Sbjct: 58  AVGSGLASLIVLAEQLNLNRVFSYRYGEDGGAAS----DCVVCLCRLRDGDQVRRLACRH 113

Query: 414 VFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 563
           VFHK C DGW+ DHLN  CPLCRSPLVS+ER  + QR+V GDLVTWFS+R
Sbjct: 114 VFHKECFDGWL-DHLNFNCPLCRSPLVSDERVALTQRRVGGDLVTWFSLR 162


>ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|222852239|gb|EEE89786.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  168 bits (426), Expect = 1e-39
 Identities = 91/172 (52%), Positives = 110/172 (63%), Gaps = 3/172 (1%)
 Frame = +3

Query: 57  MGLYSNLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFDSLGDAVATEGLFS 236
           MGL + LND S ESIPL L+ FIANCV  LRS  F +   +G  R D     V  + L  
Sbjct: 1   MGLQNQLNDVSSESIPLLLIAFIANCVACLRSFFFSVFHSVGVHRLDQAH--VMDDRLMG 58

Query: 237 VMSSGLARLIMVSEQSNMSRVFCYK---SEDRVAESTYPDNCVVCLCRLTDGEQVRSLAC 407
            M SGLA LI+++EQ  ++RVF YK     D   +    D CVVCLC L DG+QVR L C
Sbjct: 59  SMGSGLAGLIVLAEQRKLNRVFAYKYCCGRDDGNDKGGSD-CVVCLCTLRDGDQVRKLDC 117

Query: 408 RHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 563
           RHVFHK C DGW+ DHLN  CPLCR PLVS+ER +  +R+V  +LV WFS+R
Sbjct: 118 RHVFHKECFDGWL-DHLNFNCPLCRWPLVSDERVEETRRRVGENLVEWFSLR 168


>ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|222863870|gb|EEF01001.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  162 bits (410), Expect = 8e-38
 Identities = 85/172 (49%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
 Frame = +3

Query: 57  MGLYSNLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFDSLGDAVATEGLFS 236
           MGL + LND S ESIPL L+  IANCV  LRS +F +   +G  R D     V  +GL  
Sbjct: 1   MGLQNQLNDVSSESIPLLLIALIANCVACLRSFLFSVFHSVGLHRLDQAH--VMDDGLLG 58

Query: 237 VMSSGLARLIMVSEQSNMSRVFCYK---SEDRVAESTYPDNCVVCLCRLTDGEQVRSLAC 407
            + SG A LI+++EQ  ++RVF YK     D         +CVVCLC L  G+QVR L C
Sbjct: 59  SIGSGFAGLIVLAEQRKLNRVFSYKYCCGGDSNTNDKGGSDCVVCLCTLRHGDQVRRLDC 118

Query: 408 RHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 563
            HVFHK C DGW+ DHLN  CPLCR PLVS+ER +  +R+V  D+V W S+R
Sbjct: 119 CHVFHKECFDGWL-DHLNFNCPLCRWPLVSDERVEETRRRVGADVVDWLSLR 169


>ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max]
          Length = 169

 Score =  154 bits (390), Expect = 2e-35
 Identities = 78/171 (45%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
 Frame = +3

Query: 57  MGLYSNLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFDSLGDAVATEGLFS 236
           MGL + LND S  SIPL ++  IA CVNYLRS++F ++Q +G SRF S  D +  E   +
Sbjct: 1   MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLQTLGLSRFHS--DQIVDERFLA 58

Query: 237 VMSSGLARLIMVSEQSNMSRVFCYKSEDRVAESTYPDN---CVVCLCRLTDGEQVRSLAC 407
            + SGLA LIM+S+Q  +S  F +      A   +  +   CVVC     DG+QVR L C
Sbjct: 59  AVGSGLAGLIMLSDQLTLSSQFFHHHHGTAAGHDHDHDHHPCVVCQATFEDGDQVRMLPC 118

Query: 408 RHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSM 560
           RHVFH+ C DGW+  H    CPLCRSPL S+ER  + +R++   L++WFS+
Sbjct: 119 RHVFHRRCFDGWL-HHYKFNCPLCRSPLFSDERVALTERRLGQQLISWFSL 168


>ref|XP_002526304.1| conserved hypothetical protein [Ricinus communis]
           gi|223534385|gb|EEF36093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  151 bits (381), Expect = 2e-34
 Identities = 85/184 (46%), Positives = 110/184 (59%), Gaps = 15/184 (8%)
 Frame = +3

Query: 57  MGLYSNLNDASPESIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFDSLGDAVATEGLF- 233
           MGL S LND S +SIPL L+  IA  +++LRS  F I   M   RF +    +  EGL  
Sbjct: 1   MGLQSQLNDVSSDSIPLLLLALIAKSIDHLRSFFFSIFHSMALPRFTNSQSILFDEGLLI 60

Query: 234 SVMSSGLARLIMVSEQSNMSRVFCYK------SEDRV--------AESTYPDNCVVCLCR 371
             M SGL+ LI+++EQ N++R+F Y+      ++D          A      +CVVCLC 
Sbjct: 61  DSMGSGLSSLIVLAEQLNVNRLFSYRYRSCGGNDDNHNRGGAGAGAGGGGGSDCVVCLCA 120

Query: 372 LTDGEQVRSLACRHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTW 551
           L+DG+QVR L CRHVFHK C D W+   L   CPLCRSPLVS +R    + +VAGDLV W
Sbjct: 121 LSDGDQVRKLDCRHVFHKDCFDDWL-RQLKFNCPLCRSPLVSGQRVLSTRSRVAGDLVAW 179

Query: 552 FSMR 563
           FS+R
Sbjct: 180 FSVR 183