BLASTX nr result

ID: Coptis21_contig00017039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017039
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55551.1| mutator-like transposase [Rosa rugosa]                  64   1e-08
dbj|BAJ99880.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   6e-08
ref|XP_002438704.1| hypothetical protein SORBIDRAFT_10g024700 [S...    60   2e-07
ref|XP_003563589.1| PREDICTED: uncharacterized protein LOC100844...    59   3e-07
dbj|BAJ96539.1| predicted protein [Hordeum vulgare subsp. vulgar...    59   5e-07

>gb|AFP55551.1| mutator-like transposase [Rosa rugosa]
          Length = 721

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
 Frame = -3

Query: 291 YKTIAWVYNFSGGVGQRFELGAAEFRLKVLEFSIATGYKYKFTKNDECRVTAICGKRLET 112
           Y T  W  ++    GQ+FE G  EFR K+ +++I  G+ Y+F +ND+ RV A C K+   
Sbjct: 137 YMTKGWE-SYIHSEGQKFEGGVVEFRDKLRKYAIEIGFSYEFVRNDKVRVIAQCSKKHSQ 195

Query: 111 NCLWLIHA--SDNFGAFAIRKINPIHTC 34
            C WL+ A      G F I+++  +HTC
Sbjct: 196 GCNWLVKAYLCRANGFFMIKRLVNVHTC 223


>dbj|BAJ99880.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 881

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = -3

Query: 255 GVGQRFELGAAEFRLKVLEFSIATGYKYKFTKNDECRVTAICGKRLETNCLWLIHASDNF 76
           GVGQ F+    +FR ++ ++SI+ G+ Y+F KN+  RVT  C   +   C W +HAS++ 
Sbjct: 317 GVGQEFD-NVKDFRAQLCKYSISKGFAYRFIKNETTRVTVKC---VGDGCTWRLHASESS 372

Query: 75  GA--FAIRKINPIHTCG 31
            +  F I+K+  +HTCG
Sbjct: 373 RSKKFVIKKMTDVHTCG 389


>ref|XP_002438704.1| hypothetical protein SORBIDRAFT_10g024700 [Sorghum bicolor]
           gi|241916927|gb|EER90071.1| hypothetical protein
           SORBIDRAFT_10g024700 [Sorghum bicolor]
          Length = 720

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = -3

Query: 372 SVPALAYAPAESSSSNSLVVDACGNDEYKTIAWVYNFSGGVGQRFELGAAEFRLKVLEFS 193
           S+ A++  P ++ + +    D  G+   K  A   N   GVGQ FE G  +FR  + +++
Sbjct: 110 SIVAVSATPTDAFAISPTTQD--GSKRQKVCASWKNVITGVGQVFE-GPKDFRDALHKYA 166

Query: 192 IATGYKYKFTKNDECRVTAICGKRLETNCLWLIHASDNFG--AFAIRKINPIHTC 34
           IA  + Y+F KND  RVTA C       C W IHAS +     F I+KI+  HTC
Sbjct: 167 IAHRFHYRFIKNDSSRVTAEC---TGEGCPWRIHASKSPAKKEFMIKKISESHTC 218


>ref|XP_003563589.1| PREDICTED: uncharacterized protein LOC100844444 [Brachypodium
           distachyon]
          Length = 733

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
 Frame = -3

Query: 435 FAKKELTVEVKVVCSVPALGCSVPALAYAPAESSSSNSLVVDACGNDEYKTIAWVYNFSG 256
           F  +  T  + V+  V      V A +  P E+++      D  G+   K  A   N   
Sbjct: 89  FHAESETTYIYVMKKVDNRAKGVVADSGTPVETTAVVPTTED--GSKRQKVCATWKNVIT 146

Query: 255 GVGQRFELGAAEFRLKVLEFSIATGYKYKFTKNDECRVTAICGKRLETNCLWLIHASDNF 76
           GVGQ FE G  +FR  + +++IA  + Y+F KND  RVTA C      +C W IHAS + 
Sbjct: 147 GVGQVFE-GPKDFRDALHKYAIAHRFHYRFVKNDSSRVTAEC---TGEDCPWRIHASKSP 202

Query: 75  GA--FAIRKINPIHTC 34
               F I+KI+  HTC
Sbjct: 203 AKQDFMIKKISESHTC 218


>dbj|BAJ96539.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326531422|dbj|BAK05586.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 720

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
 Frame = -3

Query: 348 PAESSSSNSLVVDAC--GNDEYKTIAWVYNFSGGVGQRFELGAAEFRLKVLEFSIATGYK 175
           P  S+ ++S ++     G+   K  A   N   GVGQ FE G  EFR  + +++IA  + 
Sbjct: 113 PDSSAPADSAIIGTTPDGSKRQKICASWENTITGVGQVFE-GPKEFRDALHKYAIAHRFH 171

Query: 174 YKFTKNDECRVTAICGKRLETNCLWLIHASDNFG--AFAIRKINPIHTC 34
           Y+F KND  RVT  C    +  C W IHAS +     F I+K+   HTC
Sbjct: 172 YRFVKNDSSRVTVEC---TDEGCPWRIHASKSSANQEFMIKKVVGSHTC 217


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