BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017016
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   309   3e-82
emb|CBI38027.3| unnamed protein product [Vitis vinifera]              301   6e-80
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   301   6e-80
ref|NP_565513.1| RNA recognition motif-containing protein [Arabi...   296   3e-78
ref|XP_002880379.1| RNA recognition motif-containing protein [Ar...   294   1e-77

>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  309 bits (792), Expect = 3e-82
 Identities = 148/206 (71%), Positives = 177/206 (85%)
 Frame = +3

Query: 33  RKTKTLPIELTDKEDCSDKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSITYTVPKE 212
           RK   L  +LTDKE+CS+KQ+VARTV+FGGLLN  MAE+V +RAKE GTVCS+TY +PKE
Sbjct: 162 RKPAKLVTDLTDKENCSEKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKE 221

Query: 213 ELELNGLAQDGCRIEALAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWK 392
           EL+ +GL QDGCR  A AVL+ SVK AR+SV +LHQ+++KGG+VWARQLGGEG KTQKWK
Sbjct: 222 ELKKHGLEQDGCRSGASAVLFTSVKEARSSVAMLHQKEIKGGIVWARQLGGEGCKTQKWK 281

Query: 393 LIVRNLPFKATVNEIRVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAETAIQKV 572
           LI+RNLPFKA  NEI+ +F SAG VWDVF+P+N ETGLSKGF FVKFTCK+DAE AIQK 
Sbjct: 282 LIIRNLPFKAKPNEIKGVFESAGCVWDVFVPHNSETGLSKGFAFVKFTCKQDAENAIQKF 341

Query: 573 NGQTFGKRPIAVDWAVPKKLFTAGAD 650
           NGQ FGKRPIAVDWAVPKK++++GA+
Sbjct: 342 NGQKFGKRPIAVDWAVPKKIYSSGAN 367


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  301 bits (772), Expect = 6e-80
 Identities = 148/209 (70%), Positives = 173/209 (82%)
 Frame = +3

Query: 30  IRKTKTLPIELTDKEDCSDKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSITYTVPK 209
           +RK      +  DK   S+KQ+VARTV+FGGLLNADMAE V  RA+EVGTVCS+TY +PK
Sbjct: 144 LRKALKPCTDQADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPK 203

Query: 210 EELELNGLAQDGCRIEALAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKW 389
           EELE +GL+QDGC+I+A AVLY SVK A ASV +LHQ+++KGG+VWARQLGGEGSKTQKW
Sbjct: 204 EELEHHGLSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKW 263

Query: 390 KLIVRNLPFKATVNEIRVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAETAIQK 569
           KLIVRNLPFKA V EI+ +FSSAGFVWD FIP N ETGLS+GF FVKFT K+DAE AIQK
Sbjct: 264 KLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQK 323

Query: 570 VNGQTFGKRPIAVDWAVPKKLFTAGADTV 656
            NG+  GKRPIAVDWAVPKK++  GA+ V
Sbjct: 324 FNGEKIGKRPIAVDWAVPKKIYITGANPV 352


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  301 bits (772), Expect = 6e-80
 Identities = 148/209 (70%), Positives = 173/209 (82%)
 Frame = +3

Query: 30  IRKTKTLPIELTDKEDCSDKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSITYTVPK 209
           +RK      +  DK   S+KQ+VARTV+FGGLLNADMAE V  RA+EVGTVCS+TY +PK
Sbjct: 163 LRKALKPCTDQADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPK 222

Query: 210 EELELNGLAQDGCRIEALAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKW 389
           EELE +GL+QDGC+I+A AVLY SVK A ASV +LHQ+++KGG+VWARQLGGEGSKTQKW
Sbjct: 223 EELEHHGLSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKW 282

Query: 390 KLIVRNLPFKATVNEIRVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAETAIQK 569
           KLIVRNLPFKA V EI+ +FSSAGFVWD FIP N ETGLS+GF FVKFT K+DAE AIQK
Sbjct: 283 KLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQK 342

Query: 570 VNGQTFGKRPIAVDWAVPKKLFTAGADTV 656
            NG+  GKRPIAVDWAVPKK++  GA+ V
Sbjct: 343 FNGEKIGKRPIAVDWAVPKKIYITGANPV 371


>ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis
           thaliana] gi|16604631|gb|AAL24108.1| unknown protein
           [Arabidopsis thaliana] gi|27754736|gb|AAO22811.1|
           unknown protein [Arabidopsis thaliana]
           gi|330252084|gb|AEC07178.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 1003

 Score =  296 bits (757), Expect = 3e-78
 Identities = 143/206 (69%), Positives = 167/206 (81%)
 Frame = +3

Query: 33  RKTKTLPIELTDKEDCSDKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSITYTVPKE 212
           R TK L ++L DKE CSDKQ+VARTV+FGGL NA+MAE V  R KE+GTVCS+ Y +PKE
Sbjct: 214 RPTK-LHVDLPDKETCSDKQRVARTVIFGGLANAEMAEVVHSRVKEIGTVCSVRYPLPKE 272

Query: 213 ELELNGLAQDGCRIEALAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWK 392
           EL+ NGL QDGCR EA AVL+ SVK+A A+V  LHQ +VKG L+WARQLGGEGSK QKWK
Sbjct: 273 ELQQNGLTQDGCRAEASAVLFTSVKSACAAVAKLHQTEVKGNLIWARQLGGEGSKAQKWK 332

Query: 393 LIVRNLPFKATVNEIRVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAETAIQKV 572
           LI+RNLPF+A  ++I+V+FS+ GFVWDVFIP N ETGL KGF FVKFTCKKDA  AI+K 
Sbjct: 333 LIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAANAIKKF 392

Query: 573 NGQTFGKRPIAVDWAVPKKLFTAGAD 650
           NG  FGKRPIAVDWAVPK ++   AD
Sbjct: 393 NGHMFGKRPIAVDWAVPKNIYNGAAD 418


>ref|XP_002880379.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297326218|gb|EFH56638.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  294 bits (752), Expect = 1e-77
 Identities = 143/212 (67%), Positives = 167/212 (78%), Gaps = 1/212 (0%)
 Frame = +3

Query: 18  QSKVIRKTKT-LPIELTDKEDCSDKQKVARTVVFGGLLNADMAEEVLRRAKEVGTVCSIT 194
           +  + RK  T L ++L DKE CSDKQ+VARTV+FGGL NA+MAE V  R KE+GTVCS+ 
Sbjct: 189 EKPIERKGPTKLHVDLPDKETCSDKQRVARTVIFGGLANAEMAEVVHSRVKEIGTVCSVR 248

Query: 195 YTVPKEELELNGLAQDGCRIEALAVLYESVKAARASVGVLHQQKVKGGLVWARQLGGEGS 374
           Y +PKEEL+ NGL QDGCR EA AVL+ SVK+A A V  LHQ ++KG L+WARQLGGEGS
Sbjct: 249 YPLPKEELQQNGLTQDGCRAEASAVLFTSVKSACAVVAKLHQTEIKGNLIWARQLGGEGS 308

Query: 375 KTQKWKLIVRNLPFKATVNEIRVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAE 554
           K QKWKLI+RNLPF+A  ++I+ +FS+ GFVWDVFIP N ETGL KGF FVKFTCKKDAE
Sbjct: 309 KAQKWKLIIRNLPFQAKPSDIKEVFSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAE 368

Query: 555 TAIQKVNGQTFGKRPIAVDWAVPKKLFTAGAD 650
            AIQ  NG  FGKRPIAVDWAVPK L+   AD
Sbjct: 369 NAIQMFNGHMFGKRPIAVDWAVPKNLYNGAAD 400