BLASTX nr result

ID: Coptis21_contig00017011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017011
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACM45081.1| 3-dehydroquinate synthase [Vitis vinifera]             129   3e-28
ref|XP_002263236.1| PREDICTED: 3-dehydroquinate synthase [Vitis ...   129   3e-28
emb|CAN82907.1| hypothetical protein VITISV_039705 [Vitis vinifera]   129   5e-28
gb|AFK41126.1| unknown [Medicago truncatula]                          125   4e-27
ref|XP_003612212.1| 3-dehydroquinate synthase [Medicago truncatu...   125   4e-27

>gb|ACM45081.1| 3-dehydroquinate synthase [Vitis vinifera]
          Length = 456

 Score =  129 bits (325), Expect = 3e-28
 Identities = 68/112 (60%), Positives = 86/112 (76%)
 Frame = +3

Query: 243 LSSVGLTSGKLRSNHLKTSRALKRSNISSTSTPLMEKKYSPTPNPTEPTIVDVDLGNRSY 422
           +S + +   ++  + LK SR    S IS++STP+M++  S T +P  PT+V+VDLGNRSY
Sbjct: 48  VSPIKIELNRVGVSALKVSRI--GSRISASSTPVMDQSPSQT-SPRVPTVVEVDLGNRSY 104

Query: 423 PIYIGSGLLNQPDLLQRHVHGKRVLVVTNTTVAPLYLDKVISALTYGNSNVS 578
           PIYIGSGLL QP+LLQRHVHGKR LVVTNTT+A LYLDKV+ ALT GN N+S
Sbjct: 105 PIYIGSGLLQQPELLQRHVHGKRALVVTNTTIAALYLDKVVDALTRGNPNIS 156


>ref|XP_002263236.1| PREDICTED: 3-dehydroquinate synthase [Vitis vinifera]
           gi|297734973|emb|CBI17335.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  129 bits (325), Expect = 3e-28
 Identities = 68/112 (60%), Positives = 86/112 (76%)
 Frame = +3

Query: 243 LSSVGLTSGKLRSNHLKTSRALKRSNISSTSTPLMEKKYSPTPNPTEPTIVDVDLGNRSY 422
           +S + +   ++  + LK SR    S IS++STP+M++  S T +P  PT+V+VDLGNRSY
Sbjct: 48  VSPIKIELNRVGVSALKVSRI--GSRISASSTPVMDQSPSQT-SPRVPTVVEVDLGNRSY 104

Query: 423 PIYIGSGLLNQPDLLQRHVHGKRVLVVTNTTVAPLYLDKVISALTYGNSNVS 578
           PIYIGSGLL QP+LLQRHVHGKR LVVTNTT+A LYLDKV+ ALT GN N+S
Sbjct: 105 PIYIGSGLLQQPELLQRHVHGKRALVVTNTTIAALYLDKVVDALTRGNPNIS 156


>emb|CAN82907.1| hypothetical protein VITISV_039705 [Vitis vinifera]
          Length = 456

 Score =  129 bits (323), Expect = 5e-28
 Identities = 68/112 (60%), Positives = 85/112 (75%)
 Frame = +3

Query: 243 LSSVGLTSGKLRSNHLKTSRALKRSNISSTSTPLMEKKYSPTPNPTEPTIVDVDLGNRSY 422
           +S + +   ++  + LK SR    S IS++STP+M+   S T +P  PT+V+VDLGNRSY
Sbjct: 48  VSPIKIELNRVGVSALKVSRI--GSRISASSTPVMDXSPSQT-SPRVPTVVEVDLGNRSY 104

Query: 423 PIYIGSGLLNQPDLLQRHVHGKRVLVVTNTTVAPLYLDKVISALTYGNSNVS 578
           PIYIGSGLL QP+LLQRHVHGKR LVVTNTT+A LYLDKV+ ALT GN N+S
Sbjct: 105 PIYIGSGLLQQPELLQRHVHGKRALVVTNTTIAALYLDKVVDALTRGNPNIS 156


>gb|AFK41126.1| unknown [Medicago truncatula]
          Length = 428

 Score =  125 bits (315), Expect = 4e-27
 Identities = 64/89 (71%), Positives = 75/89 (84%)
 Frame = +3

Query: 312 RSNISSTSTPLMEKKYSPTPNPTEPTIVDVDLGNRSYPIYIGSGLLNQPDLLQRHVHGKR 491
           RS I ++S+ LM+  +S    P  PTIV+VDLGNRSYPIYIGSGLLN+P+LLQRHVHGK+
Sbjct: 56  RSPICASSSQLMDP-FSAKIQPGVPTIVNVDLGNRSYPIYIGSGLLNKPELLQRHVHGKK 114

Query: 492 VLVVTNTTVAPLYLDKVISALTYGNSNVS 578
           VL+VTNTTVAPLYLDKV+ ALT GN NVS
Sbjct: 115 VLIVTNTTVAPLYLDKVVDALTSGNPNVS 143


>ref|XP_003612212.1| 3-dehydroquinate synthase [Medicago truncatula]
           gi|355513547|gb|AES95170.1| 3-dehydroquinate synthase
           [Medicago truncatula]
          Length = 443

 Score =  125 bits (315), Expect = 4e-27
 Identities = 64/89 (71%), Positives = 75/89 (84%)
 Frame = +3

Query: 312 RSNISSTSTPLMEKKYSPTPNPTEPTIVDVDLGNRSYPIYIGSGLLNQPDLLQRHVHGKR 491
           RS I ++S+ LM+  +S    P  PTIV+VDLGNRSYPIYIGSGLLN+P+LLQRHVHGK+
Sbjct: 56  RSPICASSSQLMDP-FSAKIQPGVPTIVNVDLGNRSYPIYIGSGLLNKPELLQRHVHGKK 114

Query: 492 VLVVTNTTVAPLYLDKVISALTYGNSNVS 578
           VL+VTNTTVAPLYLDKV+ ALT GN NVS
Sbjct: 115 VLIVTNTTVAPLYLDKVVDALTSGNPNVS 143


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