BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016972
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605658.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    75   7e-24
ref|XP_003622115.1| Helicase-like protein [Medicago truncatula] ...    70   1e-21
ref|XP_002455782.1| hypothetical protein SORBIDRAFT_03g025175 [S...    61   2e-17
ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [S...    59   3e-15
dbj|BAD44947.1| helicase-like protein [Oryza sativa Japonica Gro...    60   7e-15

>ref|XP_003605658.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355506713|gb|AES87855.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 116

 Score = 75.5 bits (184), Expect(2) = 7e-24
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = +3

Query: 150 IYLPNHVFNHGQLYVAMSRGVSRNTTKILVKKGVLPGLSGFYTRNVVYADLL 305
           IYLP HVFNHGQLYVA+SRGVS+N+TK+L+K+G + G    +T+NVV+ D+L
Sbjct: 63  IYLPRHVFNHGQLYVALSRGVSQNSTKVLIKEGKIEGEDEDFTKNVVFKDIL 114



 Score = 60.1 bits (144), Expect(2) = 7e-24
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = +1

Query: 10  AFLPRIMLKSSANIRRPFLLTRKQFPIRLSFALTINKS*GQTIPCV-IYIYRIMF 171
           AFLP+I LK + + R  F+L+RKQFPIRLSFA+TINKS G TI  V IY+ R +F
Sbjct: 16  AFLPKIKLKINVSSRPSFVLSRKQFPIRLSFAITINKSQGHTILNVKIYLPRHVF 70


>ref|XP_003622115.1| Helicase-like protein [Medicago truncatula]
           gi|355497130|gb|AES78333.1| Helicase-like protein
           [Medicago truncatula]
          Length = 165

 Score = 70.5 bits (171), Expect(2) = 1e-21
 Identities = 30/52 (57%), Positives = 43/52 (82%)
 Frame = +3

Query: 150 IYLPNHVFNHGQLYVAMSRGVSRNTTKILVKKGVLPGLSGFYTRNVVYADLL 305
           IYLP H+F+HGQLYVA+SRGV +N+TK+L+K+G + G  G +T+NVV+  +L
Sbjct: 110 IYLPRHIFSHGQLYVALSRGVYQNSTKVLIKEGKIEGEDGDFTKNVVFKYIL 161



 Score = 57.4 bits (137), Expect(2) = 1e-21
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = +1

Query: 1   GRPAFLPRIMLKSSANIRRPFLLTRKQFPIRLSFALTINKS*GQTIPCV-IYIYRIMF 171
           G+ AFLPRI LK++     PF+L+R QF IRLSF +TINKS G+TI  V IY+ R +F
Sbjct: 60  GKRAFLPRIKLKTNVGSGLPFVLSRNQFLIRLSFVITINKSQGKTIFNVEIYLPRHIF 117


>ref|XP_002455782.1| hypothetical protein SORBIDRAFT_03g025175 [Sorghum bicolor]
           gi|241927757|gb|EES00902.1| hypothetical protein
           SORBIDRAFT_03g025175 [Sorghum bicolor]
          Length = 164

 Score = 61.2 bits (147), Expect(2) = 2e-17
 Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +1

Query: 1   GRPAFLPRIMLKSSANIRRPFLLTRKQFPIRLSFALTINKS*GQTIPCV-IYIYRIMF 171
           G+  F+PR+ L  S +I  PF   RKQFP+RLSFA+TINKS GQTIP V IY+   +F
Sbjct: 62  GKRVFIPRLPLSPSDDISLPFKFKRKQFPMRLSFAMTINKSQGQTIPNVGIYLPEPVF 119



 Score = 52.4 bits (124), Expect(2) = 2e-17
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = +3

Query: 150 IYLPNHVFNHGQLYVAMSRGVSRNTTKILVKKGVLPGLSGFYTRNVVYADLL 305
           IYLP  VF+H QLYV + RGVSR +T+IL K       +G  T+N+VY D+L
Sbjct: 112 IYLPEPVFSHEQLYVGLPRGVSRASTRILAKPKEDLDPTGKSTKNIVYRDVL 163


>ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [Sorghum bicolor]
            gi|241945599|gb|EES18744.1| hypothetical protein
            SORBIDRAFT_09g029620 [Sorghum bicolor]
          Length = 1108

 Score = 59.3 bits (142), Expect(2) = 3e-15
 Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = +1

Query: 1    GRPAFLPRIMLKSSANIRRPFLLTRKQFPIRLSFALTINKS*GQTIPCV-IYIYRIMF 171
            G   FLPRI L  S +   PF L RKQFP+RLSFA+TINKS GQTIP V +Y+   +F
Sbjct: 989  GMRVFLPRIPLCPSDDEMFPFRLKRKQFPVRLSFAMTINKSQGQTIPNVGVYLPNPVF 1046



 Score = 47.0 bits (110), Expect(2) = 3e-15
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 16/68 (23%)
 Frame = +3

Query: 150  IYLPNHVFNHGQLYVAMSRGVSRNTTKILV----------------KKGVLPGLSGFYTR 281
            +YLPN VF+HGQLYVA+SR  +    K+L                 KK      S  YT+
Sbjct: 1039 VYLPNPVFSHGQLYVALSRATATKNIKVLTGKHEEEEDEEDKKNKKKKTKKISTSETYTK 1098

Query: 282  NVVYADLL 305
            N+VY ++L
Sbjct: 1099 NIVYTEVL 1106


>dbj|BAD44947.1| helicase-like protein [Oryza sativa Japonica Group]
           gi|52077557|dbj|BAD45118.1| helicase-like protein [Oryza
           sativa Japonica Group]
          Length = 147

 Score = 59.7 bits (143), Expect(2) = 7e-15
 Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +1

Query: 4   RPAFLPRIMLKSSANIRRPFLLTRKQFPIRLSFALTINKS*GQTIPCV-IYIYRIMF 171
           +  F+P I L  S +I  PF L RKQFPIRLSFA+TINKS GQTIP V IY+   +F
Sbjct: 48  KKVFIPCIPLSPSDDISLPFKLKRKQFPIRLSFAMTINKSQGQTIPNVGIYLPEPVF 104



 Score = 45.4 bits (106), Expect(2) = 7e-15
 Identities = 27/52 (51%), Positives = 33/52 (63%)
 Frame = +3

Query: 150 IYLPNHVFNHGQLYVAMSRGVSRNTTKILVKKGVLPGLSGFYTRNVVYADLL 305
           IYLP  VF+HG    A+SRGVSR TT+IL K       +G  TRN+VY  +L
Sbjct: 97  IYLPEPVFSHGH---ALSRGVSRLTTRILAKPKKEVDPTGKSTRNIVYKYVL 145