BLASTX nr result
ID: Coptis21_contig00016968
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00016968 (253 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633196.1| PREDICTED: general transcription factor IIE ... 88 6e-16 emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera] 88 6e-16 ref|XP_004155034.1| PREDICTED: general transcription factor IIE ... 88 8e-16 ref|XP_004138223.1| PREDICTED: general transcription factor IIE ... 88 8e-16 ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2... 88 8e-16 >ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis vinifera] gi|297735317|emb|CBI17757.3| unnamed protein product [Vitis vinifera] Length = 475 Score = 88.2 bits (217), Expect = 6e-16 Identities = 42/48 (87%), Positives = 44/48 (91%) Frame = +3 Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251 MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT Sbjct: 1 MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48 >emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera] Length = 729 Score = 88.2 bits (217), Expect = 6e-16 Identities = 42/48 (87%), Positives = 44/48 (91%) Frame = +3 Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251 MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT Sbjct: 1 MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48 >ref|XP_004155034.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis sativus] Length = 403 Score = 87.8 bits (216), Expect = 8e-16 Identities = 42/48 (87%), Positives = 44/48 (91%) Frame = +3 Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251 MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT Sbjct: 1 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48 >ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis sativus] Length = 475 Score = 87.8 bits (216), Expect = 8e-16 Identities = 42/48 (87%), Positives = 44/48 (91%) Frame = +3 Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251 MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT Sbjct: 1 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48 >ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1| predicted protein [Populus trichocarpa] Length = 472 Score = 87.8 bits (216), Expect = 8e-16 Identities = 42/48 (87%), Positives = 44/48 (91%) Frame = +3 Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251 MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT Sbjct: 1 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48