BLASTX nr result

ID: Coptis21_contig00016968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016968
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...    88   6e-16
emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera]    88   6e-16
ref|XP_004155034.1| PREDICTED: general transcription factor IIE ...    88   8e-16
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...    88   8e-16
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
           vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
           product [Vitis vinifera]
          Length = 475

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/48 (87%), Positives = 44/48 (91%)
 Frame = +3

Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251
           MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT
Sbjct: 1   MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48


>emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera]
          Length = 729

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/48 (87%), Positives = 44/48 (91%)
 Frame = +3

Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251
           MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT
Sbjct: 1   MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48


>ref|XP_004155034.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
           sativus]
          Length = 403

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/48 (87%), Positives = 44/48 (91%)
 Frame = +3

Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251
           MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
           sativus]
          Length = 475

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/48 (87%), Positives = 44/48 (91%)
 Frame = +3

Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251
           MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/48 (87%), Positives = 44/48 (91%)
 Frame = +3

Query: 108 MSAEPFNRLVKLVARAFYDDITMKGDTQPKTGRSDNRGMAVVILDALT 251
           MS EPFNRLVKL ARAFYDDIT KGD QPKTGRSDNRG+AVV+LDALT
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALT 48


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