BLASTX nr result

ID: Coptis21_contig00016957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016957
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19366.3| unnamed protein product [Vitis vinifera]              110   4e-22
ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|2...   110   5e-22
ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|2...   107   4e-21
ref|XP_002510054.1| conserved hypothetical protein [Ricinus comm...    89   1e-15
ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago ...    84   3e-14

>emb|CBI19366.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  110 bits (275), Expect = 4e-22
 Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 5/152 (3%)
 Frame = -3

Query: 657 MNPSKVHSQGNIPFSWENQPGISKVK-----YPSDVGTCALIKLPPPPRQSDVSSPKILG 493
           MN SK+HSQGN+PF+WEN+PG+ K +      P+D G   +IKL PPP   +   P + G
Sbjct: 1   MNQSKIHSQGNVPFAWENKPGVCKARRDDEDCPTDTGH-FVIKLQPPPCPLEKGRPSVHG 59

Query: 492 HDIQVXXXXXXXXXPLRSSSRKGRRRQDDDPFLAAYKECTKSVKQSKLSTYSKKVAGSRE 313
             I +           R+SS+KG  R+ +DPFLAAYKECTK+ ++     +  K    R 
Sbjct: 60  SQIPLPPCTFQGPPS-RNSSKKGHLRKQEDPFLAAYKECTKNTRKG----HDGKTHLGRS 114

Query: 312 GRIGSLFSCKYSCSVREDSMVKLSRLSPPIPR 217
                  SCK+SC+VR+D++V  SRLS  + R
Sbjct: 115 SMFN--LSCKHSCNVRDDNLVSKSRLSALVSR 144


>ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|222853788|gb|EEE91335.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  110 bits (274), Expect = 5e-22
 Identities = 69/159 (43%), Positives = 93/159 (58%), Gaps = 11/159 (6%)
 Frame = -3

Query: 657 MNPSKVHSQGNIPFSWENQPGISKV---KYPSDVGTCALIKLPPP-----PRQSDVSSPK 502
           M+  KV+SQG+IPFSWE+ PG+SKV   +Y  D+G  A+    P      PR SD S   
Sbjct: 1   MSHRKVYSQGSIPFSWEDSPGVSKVIHKEYTIDIGLNAVNISSPTSPILFPRDSDTSYKV 60

Query: 501 ILGHDIQVXXXXXXXXXP---LRSSSRKGRRRQDDDPFLAAYKECTKSVKQSKLSTYSKK 331
           +  H I++              RS S KG R   +DPFLAAYKECTK+ +  KLS+ SKK
Sbjct: 61  LGSHGIKIPLPPCVSAKIEPPRRSKSVKGFRWWQEDPFLAAYKECTKNGRNGKLSSESKK 120

Query: 330 VAGSREGRIGSLFSCKYSCSVREDSMVKLSRLSPPIPRE 214
              S+  +   +FSCK SC V++D++V L+ L P IPR+
Sbjct: 121 NVRSKLRKSRLIFSCKDSCDVQDDNLVMLANL-PAIPRD 158


>ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|222860791|gb|EEE98333.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  107 bits (266), Expect = 4e-21
 Identities = 73/164 (44%), Positives = 93/164 (56%), Gaps = 6/164 (3%)
 Frame = -3

Query: 657 MNPSKVHSQGNIPFSWENQPGISKVKYPSDV--GTCALIKLPPPPRQSDVSSPKILGHDI 484
           M  SK+HS+GN+PFSWE +PG SKV    D      +++KL PPP    V S +I  HDI
Sbjct: 1   MKQSKIHSKGNVPFSWEKKPGESKVTSHHDYLSRETSVVKLQPPP--CPVESSRISTHDI 58

Query: 483 QV---XXXXXXXXXPLRSSSRKGRRRQ-DDDPFLAAYKECTKSVKQSKLSTYSKKVAGSR 316
            +            PLRSSSR+G ++  DDDPFLAAYKECTK  K       S    G R
Sbjct: 59  IIPLPPCTFQAPGAPLRSSSRRGLKKDIDDDPFLAAYKECTKKDKPVGKDFGS----GRR 114

Query: 315 EGRIGSLFSCKYSCSVREDSMVKLSRLSPPIPRETD*DSIWVHS 184
           +  I    SCK SCSVR+D++V++S++  P  RE      W HS
Sbjct: 115 KRAIFDFSSCKQSCSVRDDNLVRVSQV--PYEREK-----WHHS 151


>ref|XP_002510054.1| conserved hypothetical protein [Ricinus communis]
           gi|223550755|gb|EEF52241.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 58/122 (47%), Positives = 76/122 (62%), Gaps = 5/122 (4%)
 Frame = -3

Query: 657 MNPSKVHSQGNIPFSWENQPGISK-VKYPSDVG--TCALIKLPPPPRQSDVSSPKILGHD 487
           M+ SK +++GN+PFSWE +PG+SK +   SD       ++KL PPP    + SP+I  HD
Sbjct: 1   MDQSKANTKGNVPFSWEKKPGVSKLINQDSDPNQEEDLVLKLLPPP--CPIESPRISTHD 58

Query: 486 -IQVXXXXXXXXXPLRSSSRKGRRRQDDDPFLAAYKECTKSV-KQSKLSTYSKKVAGSRE 313
            I +         P RSSSRKG R+Q DDPFLAAYKECTKS  K  KLS  +   +G R+
Sbjct: 59  TINIPLPPCTFQPPSRSSSRKGIRKQ-DDPFLAAYKECTKSTEKGDKLSRNNAARSGLRK 117

Query: 312 GR 307
           G+
Sbjct: 118 GQ 119


>ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago truncatula]
           gi|355509615|gb|AES90757.1| hypothetical protein
           MTR_4g097480 [Medicago truncatula]
          Length = 175

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
 Frame = -3

Query: 657 MNPSKVHSQGNIPFSWENQPGISKVKYP----SDVGTCALIKLPPPPRQSDVSSPKILGH 490
           M+  K HS G+IPFSWE++PGI K        + +   +  KL P     ++S   IL  
Sbjct: 1   MSHRKSHSYGSIPFSWEDKPGICKTPNNECPLNSINKKSSSKLSPS-HFDNISKKNILEF 59

Query: 489 D---IQVXXXXXXXXXPLRSSSRKGRRRQDDDPFLAAYKECTKSVKQSKLSTYSKKVAGS 319
               I +         P RS+S KG + Q+D PFL AYKECTKS K  K+ + +KK  G 
Sbjct: 60  QDKKISIPLPPCQTQPPQRSTSGKGFKLQED-PFLVAYKECTKSDKNCKMQSKNKKGVGF 118

Query: 318 R--EGRIGSLFSCKYSCSVREDSMVKLSRLSPPIPRETD 208
                R  S+FSC+ +  V++DS +KLS+L P +P   D
Sbjct: 119 NFVSLRSYSIFSCRSAIDVKDDSYIKLSKL-PRLPAHRD 156


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