BLASTX nr result

ID: Coptis21_contig00016948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016948
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93221.1| unknown [Populus trichocarpa]                           59   3e-07

>gb|ABK93221.1| unknown [Populus trichocarpa]
          Length = 84

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = -2

Query: 406 IATVVAGALIAWGVVISLFSS-GSD--KMMKAPGTDSYMRRSDFENNPRGYFRDL 251
           I  V   AL+AWG+  +LFSS G D  K MKAPG D  M R+DFE +P+GYF+DL
Sbjct: 28  IGAVAGAALLAWGIGSALFSSPGPDAGKTMKAPGRDHRMPRADFERDPKGYFKDL 82


Top