BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016946
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511532.1| conserved hypothetical protein [Ricinus comm...    73   4e-20
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    57   4e-14
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    64   9e-14
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    62   1e-12
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    62   1e-12

>ref|XP_002511532.1| conserved hypothetical protein [Ricinus communis]
           gi|223550647|gb|EEF52134.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score = 72.8 bits (177), Expect(2) = 4e-20
 Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
 Frame = -2

Query: 312 ILPSLLFKCSSLKYLSLSFCDLRLPTIMQLCALKELVLKYIVLSKDMIRHLTTNCPMLED 133
           +LPS+ F   SL  L L FCDL LPT +QL +LK L L  I L +D I+ LT+N P+L+ 
Sbjct: 140 LLPSV-FNSKSLVSLILCFCDLELPTSIQLHSLKVLRLHRIELPQDAIQMLTSNAPVLQQ 198

Query: 132 LTLYSCNKISDLIIDIA-NPNLKSLDIFE-FFETKADTRIKICAP 4
           L L  CN+  DL I +A +P   +L I E FF     T+I I AP
Sbjct: 199 LFLSDCNRTRDLRIHVAPSPRFCNLVIIENFFPVNHTTKIYIKAP 243



 Score = 51.2 bits (121), Expect(2) = 4e-20
 Identities = 28/86 (32%), Positives = 45/86 (52%)
 Frame = -3

Query: 686 LSTRWRYLWTSISCLDFETHGWEDRKTDLVRFIDRSIFYHDGSKVHELYISLHYKDTDAF 507
           LS RWR LW  IS ++F+    E    ++V  +++ I  H G K+    +   Y+   + 
Sbjct: 41  LSRRWRDLWKYISIIEFDPSWVELTGKEIVSSLNQFICLHRGIKIQRFSVKFTYQPEMSP 100

Query: 506 FVDSWFYFAIRHNVEKFRLGLIEFDI 429
            +DSW  FAI  +VE+  L   +FD+
Sbjct: 101 SIDSWILFAINKHVEELDL---DFDV 123


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 56.6 bits (135), Expect(2) = 4e-14
 Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
 Frame = -2

Query: 324 DTRYILPSLLFKCSSLKYLSLSFC-DLRLPTIMQLCALKELVLKYIVLSKD-MIRHLTTN 151
           D R  LP + F C +L  + LS    L +PT + L +LK L LK +  S D  I+ L + 
Sbjct: 128 DWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSG 187

Query: 150 CPMLEDLTLYSCNKISDLIIDIANPNLKSLDIFEFFETKA--------DTRIKICAPN 1
           CP+LE+L +    + +  +++++NP+LK L IF F +  A        D ++ + APN
Sbjct: 188 CPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPN 245



 Score = 47.0 bits (110), Expect(2) = 4e-14
 Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
 Frame = -3

Query: 689 LLSTRWRYLWTSISCLDFETHGWEDRKTDLVRFIDRSIFYH---DGSKVHE-----LYIS 534
           +LS RWRYLW S+  LDF+   W +  T LV   +R I +    DG   H          
Sbjct: 37  ILSKRWRYLWASVPILDFDDELWLNPST-LVELEERIIMFQNFVDGVLRHSEVSCIKKFR 95

Query: 533 LHYKDTDAFFVDSWFYFAIRHNVEKFRLGLI 441
           L Y+D +   V SW   A+   V++  L L+
Sbjct: 96  LGYRDNNLDSVYSWICIALERRVQELDLHLL 126


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 63.9 bits (154), Expect(2) = 9e-14
 Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = -2

Query: 330 WSDTRYILPSLLFKCSSLKYLSLSFCDLRLPTIMQ-LCALKELVLKYIVLSKDMIRHLTT 154
           W   RY + S LF C SL +L L  C L+ P+  Q    LK L L+++ L++D+  +L +
Sbjct: 131 WKGQRYKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLIS 190

Query: 153 NCPMLEDLTLYSCNKISDLIIDIANPNLKSLDIFEFFE 40
           +CP+LE LTL + +  ++L ID   PNL   DI   FE
Sbjct: 191 SCPLLERLTLMNFDGFTNLNIDA--PNLLFFDIGGKFE 226



 Score = 38.5 bits (88), Expect(2) = 9e-14
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
 Frame = -3

Query: 689 LLSTRWRYLWTSISCLDFETH----GWEDR---KTDLVRFIDRSIFYHDGSKVHELYISL 531
           +LS++WRY W ++  L F+TH      +D    K  L+R ID  +  H G  +++  +S 
Sbjct: 44  VLSSKWRYKWATLPILVFDTHCVSVASQDHMIIKNKLLRIIDHVLLLHSG-PINKFKLS- 101

Query: 530 HYKDTDAFFVDSWFYFAIRHNVEKFRL 450
           H        +D W     R ++++F L
Sbjct: 102 HRDLIGVTDIDRWTLHLCRKSIKEFVL 128


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score = 61.6 bits (148), Expect(2) = 1e-12
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = -2

Query: 330 WSDTRYILPSLLFKCSSLKYLSLSFCDLRLPTIMQ-LCALKELVLKYIVLSKDMIRHLTT 154
           W   RY +PS LF C  L +L L  C L  P+  Q    LK L L+++ LS+D   +L +
Sbjct: 363 WKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLIS 422

Query: 153 NCPMLEDLTLYSCNKISDLIIDIANPNLKSLDIFEFFE 40
            CP+LE LTL + +  +   ++I  PNL+  DI   FE
Sbjct: 423 TCPLLERLTLMNFDGFN--YLNIHAPNLQFFDIGGKFE 458



 Score = 37.0 bits (84), Expect(2) = 1e-12
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
 Frame = -3

Query: 689 LLSTRWRYLWTSISCLDFETHGWEDRKTDLV-------RFIDRSIFYHDGSKVHELYISL 531
           +LST+WRY W ++  L F++    D   DL+       R ID  +  H G  + +  +S 
Sbjct: 276 ILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIKSKLSRIIDHVLLLHSG-PIKKFKLS- 333

Query: 530 HYKDTDAFFVDSWFYFAIRHNVEKFRL 450
           H +      +D W     R  V++F L
Sbjct: 334 HRELIGVTDIDRWTLHLTRRPVKEFVL 360


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 61.6 bits (148), Expect(2) = 1e-12
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = -2

Query: 330 WSDTRYILPSLLFKCSSLKYLSLSFCDLRLPTIMQ-LCALKELVLKYIVLSKDMIRHLTT 154
           W   RY +PS LF C  L +L L  C L  P+  Q    LK L L+++ LS+D   +L +
Sbjct: 131 WKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLIS 190

Query: 153 NCPMLEDLTLYSCNKISDLIIDIANPNLKSLDIFEFFE 40
            CP+LE LTL + +  +   ++I  PNL+  DI   FE
Sbjct: 191 TCPLLERLTLMNFDGFN--YLNIHAPNLQFFDIGGKFE 226



 Score = 37.0 bits (84), Expect(2) = 1e-12
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
 Frame = -3

Query: 689 LLSTRWRYLWTSISCLDFETHGWEDRKTDLV-------RFIDRSIFYHDGSKVHELYISL 531
           +LST+WRY W ++  L F++    D   DL+       R ID  +  H G  + +  +S 
Sbjct: 44  ILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIKSKLSRIIDHVLLLHSG-PIKKFKLS- 101

Query: 530 HYKDTDAFFVDSWFYFAIRHNVEKFRL 450
           H +      +D W     R  V++F L
Sbjct: 102 HRELIGVTDIDRWTLHLTRRPVKEFVL 128