BLASTX nr result

ID: Coptis21_contig00016945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016945
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel prot...    92   9e-17
ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel prot...    92   9e-17
ref|XP_003592677.1| mscS family protein, putative [Medicago trun...    86   6e-15
ref|XP_003555851.1| PREDICTED: uncharacterized mscS family prote...    80   4e-13
ref|XP_003555850.1| PREDICTED: uncharacterized mscS family prote...    80   4e-13

>ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis
           sativus]
          Length = 923

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 12/144 (8%)
 Frame = +2

Query: 263 MDSLKKSFKQIGS-----QISGNGVQHRHQKLESQPILSDLDD---LKCESSGRRDIVLN 418
           MD   KSFK   S     ++SG      H+ L   PILSD         +SS R+++++ 
Sbjct: 1   MDFSLKSFKSHPSYKYVRKLSGADATQDHEHL---PILSDHQHSIMAVSDSSDRKEVIVK 57

Query: 419 IN-SDVEVSRQVNNNNGS-TIWRESSYDFWSDHNNTNTNSNIVAGNSSNEDGFDFQNN-- 586
           ++ +D    R  +  NGS TIWRESSYDFW+D +N     N   G +   D F+F+ +  
Sbjct: 58  VDEADASTLRATDLVNGSGTIWRESSYDFWNDSDNRR---NYGEGGAKTTDDFEFRQHRK 114

Query: 587 NVEDPPSKLIGKFLHRQKASGEIA 658
           +VEDPPSKLIG+FLH+QKASGE++
Sbjct: 115 DVEDPPSKLIGQFLHKQKASGEMS 138


>ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis
           sativus]
          Length = 923

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 12/144 (8%)
 Frame = +2

Query: 263 MDSLKKSFKQIGS-----QISGNGVQHRHQKLESQPILSDLDD---LKCESSGRRDIVLN 418
           MD   KSFK   S     ++SG      H+ L   PILSD         +SS R+++++ 
Sbjct: 1   MDFSLKSFKSHPSYKYVRKLSGADATQDHEHL---PILSDHQHSIMAVSDSSDRKEVIVK 57

Query: 419 IN-SDVEVSRQVNNNNGS-TIWRESSYDFWSDHNNTNTNSNIVAGNSSNEDGFDFQNN-- 586
           ++ +D    R  +  NGS TIWRESSYDFW+D +N     N   G +   D F+F+ +  
Sbjct: 58  VDEADASTLRATDLVNGSGTIWRESSYDFWNDSDNRR---NYGEGGAKTTDDFEFRQHRK 114

Query: 587 NVEDPPSKLIGKFLHRQKASGEIA 658
           +VEDPPSKLIG+FLH+QKASGE++
Sbjct: 115 DVEDPPSKLIGQFLHKQKASGEMS 138


>ref|XP_003592677.1| mscS family protein, putative [Medicago truncatula]
           gi|355481725|gb|AES62928.1| mscS family protein,
           putative [Medicago truncatula]
          Length = 926

 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
 Frame = +2

Query: 263 MDSLKKSFKQIGSQISGNGVQHRHQKLESQ-PILSDLDDLKCESSGRRDIVLNINSDVEV 439
           M ++KKSFK   SQ + +  +        Q PIL D            D+V+ IN D   
Sbjct: 1   MQTIKKSFKSYASQNNKHSRKFSADSDHEQLPILHDRQHSSRSFPMAGDVVVKINDDGGE 60

Query: 440 SRQVNNNNGSTIWRESSYDFWSDHNNTNTNSNIVAGNSSNEDGFDFQNN-NVEDPPSKLI 616
             Q NN     IWRESSYDFW+D            G++  ++ FDF+N   +EDPPS+LI
Sbjct: 61  PSQANNK----IWRESSYDFWND-----------TGDNVRDESFDFRNKAKLEDPPSQLI 105

Query: 617 GKFLHRQKASGEI 655
           GKFLH+Q+ASG++
Sbjct: 106 GKFLHKQRASGDM 118


>ref|XP_003555851.1| PREDICTED: uncharacterized mscS family protein At1g78610-like
           isoform 2 [Glycine max]
          Length = 868

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
 Frame = +2

Query: 263 MDSLKKSFKQIGSQI-------SGNGVQHRHQKLESQPILSDLDDLKCESSGRRDIVLNI 421
           M S++KSFK  GS         +GN      Q+L   PIL D +     +    D V+ I
Sbjct: 1   MQSIRKSFKSYGSYNKHSRFSGAGNSDSDHEQQL---PILHDQETHCHPAMPAGDYVVKI 57

Query: 422 NSDVEVSRQVNNNNGSTIWRESSYDFWSDHNNTNTNSNIVAGNSSNEDGFDFQNNNVEDP 601
           N D   + Q     G+ IWRESSY+FW++   T T     AG S  +  FDF+ +  EDP
Sbjct: 58  NEDGSEAPQ-----GNRIWRESSYEFWNNDGATTT-----AGGS--DQSFDFRQS--EDP 103

Query: 602 PSKLIGKFLHRQKASGEI 655
           PS+LIG FLH+Q+ASGE+
Sbjct: 104 PSQLIGHFLHKQRASGEM 121


>ref|XP_003555850.1| PREDICTED: uncharacterized mscS family protein At1g78610-like
           isoform 1 [Glycine max]
          Length = 870

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
 Frame = +2

Query: 263 MDSLKKSFKQIGSQI-------SGNGVQHRHQKLESQPILSDLDDLKCESSGRRDIVLNI 421
           M S++KSFK  GS         +GN      Q+L   PIL D +     +    D V+ I
Sbjct: 1   MQSIRKSFKSYGSYNKHSRFSGAGNSDSDHEQQL---PILHDQETHCHPAMPAGDYVVKI 57

Query: 422 NSDVEVSRQVNNNNGSTIWRESSYDFWSDHNNTNTNSNIVAGNSSNEDGFDFQNNNVEDP 601
           N D   + Q     G+ IWRESSY+FW++   T T     AG S  +  FDF+ +  EDP
Sbjct: 58  NEDGSEAPQ-----GNRIWRESSYEFWNNDGATTT-----AGGS--DQSFDFRQS--EDP 103

Query: 602 PSKLIGKFLHRQKASGEI 655
           PS+LIG FLH+Q+ASGE+
Sbjct: 104 PSQLIGHFLHKQRASGEM 121


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