BLASTX nr result

ID: Coptis21_contig00016940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016940
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281344.1| PREDICTED: uncharacterized protein LOC100261...   164   2e-38
emb|CBI32734.3| unnamed protein product [Vitis vinifera]              154   2e-35
ref|XP_002519535.1| conserved hypothetical protein [Ricinus comm...   149   7e-34
ref|XP_002322880.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
ref|XP_002326184.1| predicted protein [Populus trichocarpa] gi|2...   146   3e-33

>ref|XP_002281344.1| PREDICTED: uncharacterized protein LOC100261864 [Vitis vinifera]
          Length = 128

 Score =  164 bits (414), Expect = 2e-38
 Identities = 77/124 (62%), Positives = 104/124 (83%)
 Frame = +3

Query: 21  RKAMLVGLGIVMVMGFSIYLRLWSIDSEFSHEDSELVRRQFDIANKEAMDESAEWRFKYD 200
           R  +LVGL +VMV+G +IY RLW+ID   S +++E++RRQFD+AN+EAMDESAEWR KYD
Sbjct: 4   RSPILVGLVLVMVLGCAIYFRLWTIDYTISSDETEILRRQFDLANREAMDESAEWRLKYD 63

Query: 201 AEVDRATKCNKQLIQVKDTLQKKLEEVASVNKNVAVLQKENIGLLDRVESLSQELQTEKL 380
            EV+RATKC  +LI+VK++ +KK+E+ AS N+ +A+LQKEN+ LL+RVESL QEL+ EKL
Sbjct: 64  EEVERATKCLNELIKVKESSEKKVEDAASTNQKLAMLQKENMALLERVESLKQELEAEKL 123

Query: 381 KCSV 392
           KCS+
Sbjct: 124 KCSL 127


>emb|CBI32734.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score =  154 bits (388), Expect = 2e-35
 Identities = 71/113 (62%), Positives = 96/113 (84%)
 Frame = +3

Query: 54  MVMGFSIYLRLWSIDSEFSHEDSELVRRQFDIANKEAMDESAEWRFKYDAEVDRATKCNK 233
           MV+G +IY RLW+ID   S +++E++RRQFD+AN+EAMDESAEWR KYD EV+RATKC  
Sbjct: 1   MVLGCAIYFRLWTIDYTISSDETEILRRQFDLANREAMDESAEWRLKYDEEVERATKCLN 60

Query: 234 QLIQVKDTLQKKLEEVASVNKNVAVLQKENIGLLDRVESLSQELQTEKLKCSV 392
           +LI+VK++ +KK+E+ AS N+ +A+LQKEN+ LL+RVESL QEL+ EKLKCS+
Sbjct: 61  ELIKVKESSEKKVEDAASTNQKLAMLQKENMALLERVESLKQELEAEKLKCSL 113


>ref|XP_002519535.1| conserved hypothetical protein [Ricinus communis]
           gi|223541398|gb|EEF42949.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  149 bits (375), Expect = 7e-34
 Identities = 67/122 (54%), Positives = 96/122 (78%)
 Frame = +3

Query: 21  RKAMLVGLGIVMVMGFSIYLRLWSIDSEFSHEDSELVRRQFDIANKEAMDESAEWRFKYD 200
           RK +L+GL + M +G ++YLRLWSID   S +D+EL+RRQFD+AN+EAMDESAEWR KYD
Sbjct: 5   RKKILMGLAVAMFLGIAVYLRLWSIDYAISSDDAELIRRQFDLANREAMDESAEWRMKYD 64

Query: 201 AEVDRATKCNKQLIQVKDTLQKKLEEVASVNKNVAVLQKENIGLLDRVESLSQELQTEKL 380
            E +RA KC+K+LI++K    +K+++ AS+N+ + +LQKEN+ L+ R+E+L +EL   KL
Sbjct: 65  EEAERAAKCDKELIEIK----QKVDDAASINQQLVMLQKENLALVGRIEALKKELDAAKL 120

Query: 381 KC 386
           KC
Sbjct: 121 KC 122


>ref|XP_002322880.1| predicted protein [Populus trichocarpa] gi|222867510|gb|EEF04641.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  147 bits (372), Expect = 2e-33
 Identities = 67/122 (54%), Positives = 97/122 (79%)
 Frame = +3

Query: 21  RKAMLVGLGIVMVMGFSIYLRLWSIDSEFSHEDSELVRRQFDIANKEAMDESAEWRFKYD 200
           RK +LVGL + M++G ++Y RLW+ID   S +D+EL+RRQFD+AN+EA+DESAEWR KYD
Sbjct: 5   RKRILVGLMVAMILGIAVYFRLWTIDYAISSDDTELIRRQFDLANREALDESAEWRMKYD 64

Query: 201 AEVDRATKCNKQLIQVKDTLQKKLEEVASVNKNVAVLQKENIGLLDRVESLSQELQTEKL 380
            EV+R+ KC+KQLI++K    +K+E+ AS+N+ + +LQKEN+ L+ R+E L +EL+  KL
Sbjct: 65  EEVERSAKCDKQLIEIK----QKVEDAASINQQLVMLQKENMALVGRMEVLKRELEATKL 120

Query: 381 KC 386
           KC
Sbjct: 121 KC 122


>ref|XP_002326184.1| predicted protein [Populus trichocarpa] gi|222833377|gb|EEE71854.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  146 bits (369), Expect = 3e-33
 Identities = 67/122 (54%), Positives = 96/122 (78%)
 Frame = +3

Query: 21  RKAMLVGLGIVMVMGFSIYLRLWSIDSEFSHEDSELVRRQFDIANKEAMDESAEWRFKYD 200
           RK +LVGL + M++GF++Y RLW+ID   S +D+EL+RRQFD+AN+EA+DESAEWR KYD
Sbjct: 5   RKKILVGLMVAMILGFAVYFRLWTIDYAISSDDTELIRRQFDLANREALDESAEWRMKYD 64

Query: 201 AEVDRATKCNKQLIQVKDTLQKKLEEVASVNKNVAVLQKENIGLLDRVESLSQELQTEKL 380
            EV+RA KC+KQL+++K    +K+ + ASVN+ + +LQKEN+ L+ R+E L  +L+  KL
Sbjct: 65  EEVERAAKCDKQLVEIK----QKVGDAASVNQQLVMLQKENMALVGRMEVLKNKLEATKL 120

Query: 381 KC 386
           KC
Sbjct: 121 KC 122


Top