BLASTX nr result

ID: Coptis21_contig00016938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016938
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513461.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_002304747.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002309612.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002303887.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_002513461.1| conserved hypothetical protein [Ricinus communis]
           gi|223547369|gb|EEF48864.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
 Frame = +2

Query: 296 TEHTSINIIEDELVSSILGDIATVSGLTAKCCIYRVHDNLRALKERTYSPHLVSIGPLHH 475
           T    ++I  +ELV SI  +I  +  L+ +CCIYRV   LR + E+ Y+P +VSIGP HH
Sbjct: 14  TRSYEVSIDINELVESIKREIEILDPLSDECCIYRVPQQLREINEKAYTPRVVSIGPYHH 73

Query: 476 G--NLKSMEK 499
           G   LK+ME+
Sbjct: 74  GKNELKAMEE 83


>ref|XP_002304747.1| predicted protein [Populus trichocarpa] gi|222842179|gb|EEE79726.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = +2

Query: 290 EMTEHTSINIIEDELVSSILGDIATVSGLTAKCCIYRVHDNLRALKERTYSPHLVSIGPL 469
           E++   S++I  D L  S+  ++   +  +  CCIY+V + LR L E+ Y+P LVSIGP+
Sbjct: 12  ELSHQVSLDI--DRLAQSVTEELEISNPFSDTCCIYKVPERLRELNEKAYTPRLVSIGPI 69

Query: 470 HHGN--LKSME 496
           HHGN  LK+ME
Sbjct: 70  HHGNDKLKAME 80


>ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|222834311|gb|EEE72788.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
 Frame = +2

Query: 293 MTEHTSINIIEDELVSSILGDIATVSGLTAKCCIYRVHDNLRALKERTYSPHLVSIGPLH 472
           M +   +++  +EL +S+   +      +  CCIYRV + LR L E+ Y+P +VSIGPLH
Sbjct: 1   MDQSDEVSLDINELANSLREQLKIKKAFSQACCIYRVPERLRKLNEKAYTPRVVSIGPLH 60

Query: 473 HG--NLKSME 496
           HG  NLK+ME
Sbjct: 61  HGKENLKAME 70


>ref|XP_002309612.1| predicted protein [Populus trichocarpa] gi|222855588|gb|EEE93135.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = +2

Query: 284 MGEMTEHTSINIIEDELVSSILGDIATVSGLTAKCCIYRVHDNLRALKERTYSPHLVSIG 463
           M E    TSINI  +EL +S+ G++ ++  L ++CCI+ V   L  L E+  +P LVSIG
Sbjct: 1   MKETNNDTSINI--EELAASMRGELNSLPFLPSQCCIHTVPKQLHPLNEKACTPQLVSIG 58

Query: 464 PLHHG--NLKSMEK 499
           PLHHG   LK ME+
Sbjct: 59  PLHHGKEELKPMEE 72


>ref|XP_002303887.1| predicted protein [Populus trichocarpa]
           gi|224098234|ref|XP_002334569.1| predicted protein
           [Populus trichocarpa] gi|222841319|gb|EEE78866.1|
           predicted protein [Populus trichocarpa]
           gi|222873183|gb|EEF10314.1| predicted protein [Populus
           trichocarpa]
          Length = 428

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = +2

Query: 293 MTEHTSINIIEDELVSSILGDIATVSGLTAKCCIYRVHDNLRALKERTYSPHLVSIGPLH 472
           M +   +++  +EL  S+   +      +  CCIYRV + LR L E+ Y+P +VSIGP+H
Sbjct: 1   MDQSDEVSLDVNELAISLREQLKIKKAFSLACCIYRVPERLRKLNEKAYTPRVVSIGPIH 60

Query: 473 HG--NLKSME 496
           HG  NLK+ME
Sbjct: 61  HGKENLKAME 70


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