BLASTX nr result

ID: Coptis21_contig00016931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016931
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   126   2e-27
emb|CBI29875.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   123   2e-26
ref|XP_003521186.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   123   2e-26
ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26

>ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]
          Length = 647

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/83 (77%), Positives = 68/83 (81%)
 Frame = +2

Query: 62  ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241
           ISL QFI+ ++PLID+EK             RNLDTAQKRGSTILNLKCVDAQTGLMGKT
Sbjct: 13  ISLQQFISTIAPLIDLEKDAEISGSISSGSLRNLDTAQKRGSTILNLKCVDAQTGLMGKT 72

Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310
           LLEFQSTKGDVLPAHKFGTHDVV
Sbjct: 73  LLEFQSTKGDVLPAHKFGTHDVV 95


>emb|CBI29875.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/83 (77%), Positives = 68/83 (81%)
 Frame = +2

Query: 62  ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241
           ISL QFI+ ++PLID+EK             RNLDTAQKRGSTILNLKCVDAQTGLMGKT
Sbjct: 13  ISLQQFISTIAPLIDLEKAHSHSLSNLSGSLRNLDTAQKRGSTILNLKCVDAQTGLMGKT 72

Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310
           LLEFQSTKGDVLPAHKFGTHDVV
Sbjct: 73  LLEFQSTKGDVLPAHKFGTHDVV 95


>ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
          Length = 648

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/83 (72%), Positives = 68/83 (81%)
 Frame = +2

Query: 62  ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241
           +SL+QFI+I +PL+D+EK             RNLDTAQKRGSTILNLKCVD QTGLMGK+
Sbjct: 14  LSLEQFISITAPLLDLEKEAEISSSIATGASRNLDTAQKRGSTILNLKCVDVQTGLMGKS 73

Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310
           L+EFQSTKGDVLPAHKFGTHDVV
Sbjct: 74  LIEFQSTKGDVLPAHKFGTHDVV 96


>ref|XP_003521186.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
          Length = 648

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/83 (72%), Positives = 68/83 (81%)
 Frame = +2

Query: 62  ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241
           +SL+QFI+I +PL+D+EK             RNLDTAQKRGSTILNLKCVD QTGLMGK+
Sbjct: 14  LSLEQFISITAPLLDLEKEAEISSSIATGASRNLDTAQKRGSTILNLKCVDVQTGLMGKS 73

Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310
           L+EFQSTKGDVLPAHKFGTHDVV
Sbjct: 74  LIEFQSTKGDVLPAHKFGTHDVV 96


>ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|222854941|gb|EEE92488.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/83 (72%), Positives = 67/83 (80%)
 Frame = +2

Query: 62  ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241
           +SL +FI+I SPL+D+EK             RNLD+AQK+GSTILNLKCVDAQTGLMGKT
Sbjct: 13  LSLQEFISITSPLLDLEKESEISASIGSGALRNLDSAQKKGSTILNLKCVDAQTGLMGKT 72

Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310
           LLEFQS KGDVLPAHKFGTHDVV
Sbjct: 73  LLEFQSNKGDVLPAHKFGTHDVV 95


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