BLASTX nr result
ID: Coptis21_contig00016931
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00016931 (310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like ... 126 2e-27 emb|CBI29875.3| unnamed protein product [Vitis vinifera] 126 2e-27 ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like ... 123 2e-26 ref|XP_003521186.1| PREDICTED: DNA-binding protein SMUBP-2-like ... 123 2e-26 ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|2... 121 5e-26 >ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera] Length = 647 Score = 126 bits (317), Expect = 2e-27 Identities = 64/83 (77%), Positives = 68/83 (81%) Frame = +2 Query: 62 ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241 ISL QFI+ ++PLID+EK RNLDTAQKRGSTILNLKCVDAQTGLMGKT Sbjct: 13 ISLQQFISTIAPLIDLEKDAEISGSISSGSLRNLDTAQKRGSTILNLKCVDAQTGLMGKT 72 Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310 LLEFQSTKGDVLPAHKFGTHDVV Sbjct: 73 LLEFQSTKGDVLPAHKFGTHDVV 95 >emb|CBI29875.3| unnamed protein product [Vitis vinifera] Length = 647 Score = 126 bits (317), Expect = 2e-27 Identities = 64/83 (77%), Positives = 68/83 (81%) Frame = +2 Query: 62 ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241 ISL QFI+ ++PLID+EK RNLDTAQKRGSTILNLKCVDAQTGLMGKT Sbjct: 13 ISLQQFISTIAPLIDLEKAHSHSLSNLSGSLRNLDTAQKRGSTILNLKCVDAQTGLMGKT 72 Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310 LLEFQSTKGDVLPAHKFGTHDVV Sbjct: 73 LLEFQSTKGDVLPAHKFGTHDVV 95 >ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max] Length = 648 Score = 123 bits (308), Expect = 2e-26 Identities = 60/83 (72%), Positives = 68/83 (81%) Frame = +2 Query: 62 ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241 +SL+QFI+I +PL+D+EK RNLDTAQKRGSTILNLKCVD QTGLMGK+ Sbjct: 14 LSLEQFISITAPLLDLEKEAEISSSIATGASRNLDTAQKRGSTILNLKCVDVQTGLMGKS 73 Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310 L+EFQSTKGDVLPAHKFGTHDVV Sbjct: 74 LIEFQSTKGDVLPAHKFGTHDVV 96 >ref|XP_003521186.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max] Length = 648 Score = 123 bits (308), Expect = 2e-26 Identities = 60/83 (72%), Positives = 68/83 (81%) Frame = +2 Query: 62 ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241 +SL+QFI+I +PL+D+EK RNLDTAQKRGSTILNLKCVD QTGLMGK+ Sbjct: 14 LSLEQFISITAPLLDLEKEAEISSSIATGASRNLDTAQKRGSTILNLKCVDVQTGLMGKS 73 Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310 L+EFQSTKGDVLPAHKFGTHDVV Sbjct: 74 LIEFQSTKGDVLPAHKFGTHDVV 96 >ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|222854941|gb|EEE92488.1| predicted protein [Populus trichocarpa] Length = 647 Score = 121 bits (304), Expect = 5e-26 Identities = 60/83 (72%), Positives = 67/83 (80%) Frame = +2 Query: 62 ISLDQFITIMSPLIDMEKXXXXXXXXXXXXXRNLDTAQKRGSTILNLKCVDAQTGLMGKT 241 +SL +FI+I SPL+D+EK RNLD+AQK+GSTILNLKCVDAQTGLMGKT Sbjct: 13 LSLQEFISITSPLLDLEKESEISASIGSGALRNLDSAQKKGSTILNLKCVDAQTGLMGKT 72 Query: 242 LLEFQSTKGDVLPAHKFGTHDVV 310 LLEFQS KGDVLPAHKFGTHDVV Sbjct: 73 LLEFQSNKGDVLPAHKFGTHDVV 95