BLASTX nr result

ID: Coptis21_contig00016916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016916
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24348.3| unnamed protein product [Vitis vinifera]              131   7e-29
ref|XP_002273102.1| PREDICTED: superkiller viralicidic activity ...   131   7e-29
ref|XP_002527838.1| helicase, putative [Ricinus communis] gi|223...   130   1e-28
ref|XP_002886661.1| hypothetical protein ARALYDRAFT_893587 [Arab...   129   2e-28
ref|XP_003624231.1| Helicase, putative [Medicago truncatula] gi|...   129   2e-28

>emb|CBI24348.3| unnamed protein product [Vitis vinifera]
          Length = 968

 Score =  131 bits (329), Expect = 7e-29
 Identities = 76/132 (57%), Positives = 88/132 (66%), Gaps = 10/132 (7%)
 Frame = -1

Query: 367 MSGLKRKFSDDIPTTPSPGLIFQQQEES-------NTITCLHDVSYPQGYVXXXXXXXXX 209
           M  LKRK ++D P+        QQ+E+S        ++ C+HDVSYP+GY          
Sbjct: 1   MGSLKRKSTED-PSVERLSPQKQQREDSASLNTLEESVACIHDVSYPEGYEPRSSFSSSP 59

Query: 208 XXP---AKEYPFELDPFQSEAINCLDNAESVMVSAHTSAGKTVVASYAIAMSLRDKQRVI 38
                 AKE+PF LDPFQSEAI CLD  ESVMVSAHTSAGKTVVA YAIAMSL++ QRVI
Sbjct: 60  RKDSKPAKEFPFTLDPFQSEAIKCLDAEESVMVSAHTSAGKTVVALYAIAMSLQNNQRVI 119

Query: 37  YTCPIKALSNQK 2
           YT PIKALSNQK
Sbjct: 120 YTSPIKALSNQK 131


>ref|XP_002273102.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Vitis
           vinifera]
          Length = 994

 Score =  131 bits (329), Expect = 7e-29
 Identities = 76/132 (57%), Positives = 88/132 (66%), Gaps = 10/132 (7%)
 Frame = -1

Query: 367 MSGLKRKFSDDIPTTPSPGLIFQQQEES-------NTITCLHDVSYPQGYVXXXXXXXXX 209
           M  LKRK ++D P+        QQ+E+S        ++ C+HDVSYP+GY          
Sbjct: 1   MGSLKRKSTED-PSVERLSPQKQQREDSASLNTLEESVACIHDVSYPEGYEPRSSFSSSP 59

Query: 208 XXP---AKEYPFELDPFQSEAINCLDNAESVMVSAHTSAGKTVVASYAIAMSLRDKQRVI 38
                 AKE+PF LDPFQSEAI CLD  ESVMVSAHTSAGKTVVA YAIAMSL++ QRVI
Sbjct: 60  RKDSKPAKEFPFTLDPFQSEAIKCLDAEESVMVSAHTSAGKTVVALYAIAMSLQNNQRVI 119

Query: 37  YTCPIKALSNQK 2
           YT PIKALSNQK
Sbjct: 120 YTSPIKALSNQK 131


>ref|XP_002527838.1| helicase, putative [Ricinus communis] gi|223532762|gb|EEF34541.1|
           helicase, putative [Ricinus communis]
          Length = 991

 Score =  130 bits (327), Expect = 1e-28
 Identities = 78/130 (60%), Positives = 88/130 (67%), Gaps = 8/130 (6%)
 Frame = -1

Query: 367 MSGLKRKFSDDIPTTPSPGLIFQQQEES-----NTITCLHDVSYPQGYVXXXXXXXXXXX 203
           M+ LKRK S + P+  S     QQ+E         + CLHDVSYP+ YV           
Sbjct: 1   MALLKRK-SVEYPSGESLPPQKQQRENGMATADEPVACLHDVSYPENYVPPPRLDSSVQK 59

Query: 202 P---AKEYPFELDPFQSEAINCLDNAESVMVSAHTSAGKTVVASYAIAMSLRDKQRVIYT 32
               AKE+PF LDPFQSEAI CL+N ESVMVSAHTSAGKTVVA YAIAMSLR++QRVIYT
Sbjct: 60  DLKPAKEFPFTLDPFQSEAIKCLNNGESVMVSAHTSAGKTVVALYAIAMSLRNQQRVIYT 119

Query: 31  CPIKALSNQK 2
            PIKALSNQK
Sbjct: 120 SPIKALSNQK 129


>ref|XP_002886661.1| hypothetical protein ARALYDRAFT_893587 [Arabidopsis lyrata subsp.
           lyrata] gi|297332502|gb|EFH62920.1| hypothetical protein
           ARALYDRAFT_893587 [Arabidopsis lyrata subsp. lyrata]
          Length = 988

 Score =  129 bits (325), Expect = 2e-28
 Identities = 73/128 (57%), Positives = 89/128 (69%), Gaps = 6/128 (4%)
 Frame = -1

Query: 367 MSGLKRKFSDDIPTTPSPGLIFQQQEESNTIT------CLHDVSYPQGYVXXXXXXXXXX 206
           M  +KRK S ++ +  +P    Q++++S+ I       C+HDVS+P+ YV          
Sbjct: 1   MGSVKRK-SVEVSSDSAPPQKVQREDDSSQIINEELVGCVHDVSFPENYVPLAPSVHAKP 59

Query: 205 XPAKEYPFELDPFQSEAINCLDNAESVMVSAHTSAGKTVVASYAIAMSLRDKQRVIYTCP 26
             AK +PF LD FQSEAI CLDN ESVMVSAHTSAGKTVVASYAIAMSL++ QRVIYT P
Sbjct: 60  P-AKNFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVIYTSP 118

Query: 25  IKALSNQK 2
           IKALSNQK
Sbjct: 119 IKALSNQK 126


>ref|XP_003624231.1| Helicase, putative [Medicago truncatula]
           gi|355499246|gb|AES80449.1| Helicase, putative [Medicago
           truncatula]
          Length = 983

 Score =  129 bits (324), Expect = 2e-28
 Identities = 75/124 (60%), Positives = 83/124 (66%), Gaps = 2/124 (1%)
 Frame = -1

Query: 367 MSGLKRKFSDDIPTTPSPGLIFQQQEESNTITCLHDVSYPQGYVXXXXXXXXXXXP--AK 194
           M  LKRK S      PSP      Q +     C+HDVSYP GYV              AK
Sbjct: 1   MGSLKRK-SPPGEEEPSPS----HQAQQPLHDCVHDVSYPHGYVHPPPSSSSSSTKEPAK 55

Query: 193 EYPFELDPFQSEAINCLDNAESVMVSAHTSAGKTVVASYAIAMSLRDKQRVIYTCPIKAL 14
            +PF LDPFQS++I CL+N+ESVMVSAHTSAGKTVVA YAIAMSLR+KQRVIYT PIKAL
Sbjct: 56  TFPFTLDPFQSQSITCLENSESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYTSPIKAL 115

Query: 13  SNQK 2
           SNQK
Sbjct: 116 SNQK 119