BLASTX nr result

ID: Coptis21_contig00016914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016914
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus co...    84   1e-14
ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
emb|CAE45585.1| coatomer alpha subunit-like protein [Lotus japon...    82   3e-14
gb|AFW67844.1| hypothetical protein ZEAMMB73_579366 [Zea mays]         82   3e-14

>ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus communis]
           gi|223547980|gb|EEF49472.1| coatomer alpha subunit,
           putative [Ricinus communis]
          Length = 1217

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 40/45 (88%)
 Frame = +3

Query: 180 DMKAWEVETLRGHTNTVSCVMFHAKHDIIVSNSEDKSICVWDVTK 314
           D KAWEV+TLRGH N VSCVMFHAK DIIVSNSEDKSI VWDVTK
Sbjct: 235 DTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279


>ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|222868554|gb|EEF05685.1|
           predicted protein [Populus trichocarpa]
          Length = 1218

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 40/45 (88%)
 Frame = +3

Query: 180 DMKAWEVETLRGHTNTVSCVMFHAKHDIIVSNSEDKSICVWDVTK 314
           D KAWEV+TLRGH N VSCVMFHAK DIIVSNSEDKSI VWDVTK
Sbjct: 235 DTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279


>ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|222858686|gb|EEE96233.1|
           predicted protein [Populus trichocarpa]
          Length = 1220

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 40/45 (88%)
 Frame = +3

Query: 180 DMKAWEVETLRGHTNTVSCVMFHAKHDIIVSNSEDKSICVWDVTK 314
           D KAWEV+TLRGH N VSCVMFHAK DIIVSNSEDKSI VWDVTK
Sbjct: 235 DTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279


>emb|CAE45585.1| coatomer alpha subunit-like protein [Lotus japonicus]
          Length = 1221

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/45 (84%), Positives = 39/45 (86%)
 Frame = +3

Query: 180 DMKAWEVETLRGHTNTVSCVMFHAKHDIIVSNSEDKSICVWDVTK 314
           D KAWEV+TLRGH N VSCVMFHAK DIIVSNSEDKSI VWD TK
Sbjct: 235 DTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATK 279


>gb|AFW67844.1| hypothetical protein ZEAMMB73_579366 [Zea mays]
          Length = 1217

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/45 (82%), Positives = 39/45 (86%)
 Frame = +3

Query: 180 DMKAWEVETLRGHTNTVSCVMFHAKHDIIVSNSEDKSICVWDVTK 314
           D KAWEV+TLRGH N VSCVMFHAK DIIVSNSEDKSI +WD TK
Sbjct: 235 DTKAWEVDTLRGHVNNVSCVMFHAKQDIIVSNSEDKSIRIWDATK 279


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