BLASTX nr result

ID: Coptis21_contig00016912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016912
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257...   256   6e-66
emb|CBI29820.3| unnamed protein product [Vitis vinifera]              254   2e-65
ref|XP_002533439.1| conserved hypothetical protein [Ricinus comm...   238   1e-60
ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|2...   228   1e-57
ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792...   223   3e-56

>ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257201 [Vitis vinifera]
          Length = 262

 Score =  256 bits (653), Expect = 6e-66
 Identities = 138/265 (52%), Positives = 181/265 (68%), Gaps = 3/265 (1%)
 Frame = +1

Query: 88  MKLDELXXXXXXXXXXXTKQILPSNYVQSSPYQLDYNEVSDRPLVQKFGVIQLTQWYKPR 267
           MK ++L           T++ILPS Y +SS    +  ++SD+ LV +       +  + R
Sbjct: 1   MKQEQLTLHRSSSSCRSTRKILPSTYTRSSS---ESGDISDKLLVPRDSSPAFPRLARTR 57

Query: 268 NVVE-MIRSLVGLFSFSSIIPTCNKWLSNPCKMLALSGSGSNVTGTMFGYKKGHVSFAVQ 444
           N +  ++RSL+G+ SF +IIPTC +WLS P  +      G  VTGT+FG+++GHVSFAVQ
Sbjct: 58  NSISALLRSLLGVISFPTIIPTC-RWLSIPNHLSITPSLGRKVTGTLFGHRRGHVSFAVQ 116

Query: 445 EDSRSEPVLLLEFAVPTCMLVQEMSSGLVRIALECEKGSGRG--IKLLQEPTWTMYCNGK 618
           +D RSEPVLLLE A  T  LV+EMSSGLVRIALECEK + RG  +KL QEP WTMYCNG+
Sbjct: 117 DDPRSEPVLLLELATSTSTLVKEMSSGLVRIALECEKVAARGRPVKLFQEPMWTMYCNGR 176

Query: 619 RCGYAVSRTCSESDWYMLXXXXXXXXXXXXIPIDKNKITTNGMEGDQLMYMRAKFERVVG 798
           +CGYA+SR C E D ++L            IP D N+ +  G+EG +++YMRA+FERVVG
Sbjct: 177 KCGYAMSRECGEFDRHVLSTVQSVSAGAGVIPTDDNRKSIVGVEG-EMLYMRARFERVVG 235

Query: 799 NRNSEAYYMMNPDGLGGPELSIFLL 873
           +R+SEA+YMMNPDG GGPELSIFLL
Sbjct: 236 SRDSEAFYMMNPDGTGGPELSIFLL 260


>emb|CBI29820.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  254 bits (648), Expect = 2e-65
 Identities = 135/248 (54%), Positives = 176/248 (70%), Gaps = 3/248 (1%)
 Frame = +1

Query: 139 TKQILPSNYVQSSPYQLDYNEVSDRPLVQKFGVIQLTQWYKPRNVVE-MIRSLVGLFSFS 315
           T++ILPS Y +SS    +  ++SD+ LV +       +  + RN +  ++RSL+G+ SF 
Sbjct: 35  TRKILPSTYTRSSS---ESGDISDKLLVPRDSSPAFPRLARTRNSISALLRSLLGVISFP 91

Query: 316 SIIPTCNKWLSNPCKMLALSGSGSNVTGTMFGYKKGHVSFAVQEDSRSEPVLLLEFAVPT 495
           +IIPTC +WLS P  +      G  VTGT+FG+++GHVSFAVQ+D RSEPVLLLE A  T
Sbjct: 92  TIIPTC-RWLSIPNHLSITPSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATST 150

Query: 496 CMLVQEMSSGLVRIALECEKGSGRG--IKLLQEPTWTMYCNGKRCGYAVSRTCSESDWYM 669
             LV+EMSSGLVRIALECEK + RG  +KL QEP WTMYCNG++CGYA+SR C E D ++
Sbjct: 151 STLVKEMSSGLVRIALECEKVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHV 210

Query: 670 LXXXXXXXXXXXXIPIDKNKITTNGMEGDQLMYMRAKFERVVGNRNSEAYYMMNPDGLGG 849
           L            IP D N+ +  G+EG +++YMRA+FERVVG+R+SEA+YMMNPDG GG
Sbjct: 211 LSTVQSVSAGAGVIPTDDNRKSIVGVEG-EMLYMRARFERVVGSRDSEAFYMMNPDGTGG 269

Query: 850 PELSIFLL 873
           PELSIFLL
Sbjct: 270 PELSIFLL 277


>ref|XP_002533439.1| conserved hypothetical protein [Ricinus communis]
           gi|223526713|gb|EEF28946.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  238 bits (607), Expect = 1e-60
 Identities = 132/258 (51%), Positives = 178/258 (68%), Gaps = 13/258 (5%)
 Frame = +1

Query: 139 TKQILPSNYVQSS----PYQLDYNEVSDRPLVQKFG--VIQLTQWYKPRN-VVEMIRSLV 297
           T++++PSNY++S+    P   +  ++SD+ L+++     + L +  K  +    ++RS+ 
Sbjct: 19  TRKVIPSNYMRSTSTPHPTVPEREDISDKLLLRRDSPAAVSLQRLNKLHSRFSSLLRSIF 78

Query: 298 GLFSFSSII-PTCNKWLSNPCKMLALSGSGSNVTGTMFGYKKGHVSFAVQEDSRSEPVLL 474
            + +F +II PTC KWLS P  +   S  G  VTGT+FG+++GHVSFAVQ+D RSEPVLL
Sbjct: 79  KIVAFPNIIIPTC-KWLSIPTHLSIKSSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLL 137

Query: 475 LEFAVPTCMLVQEMSSGLVRIALECEK-----GSGRGIKLLQEPTWTMYCNGKRCGYAVS 639
           LE A+ T  LV+EMSSGLVRIALEC+K        R  KL  EPTWTMYCNG++CGYAVS
Sbjct: 138 LELAMSTSTLVKEMSSGLVRIALECDKVQVPTNGTRSGKLFNEPTWTMYCNGRKCGYAVS 197

Query: 640 RTCSESDWYMLXXXXXXXXXXXXIPIDKNKITTNGMEGDQLMYMRAKFERVVGNRNSEAY 819
           RTC+E DW++L            IP+ ++     G EG +L+YMRAKFERVVG+R+SEA+
Sbjct: 198 RTCTELDWHVLNTVQSVSVGAGVIPMVEDGRKNAGSEG-ELLYMRAKFERVVGSRDSEAF 256

Query: 820 YMMNPDGLGGPELSIFLL 873
           YMMNP+G GGPELSIFLL
Sbjct: 257 YMMNPEGNGGPELSIFLL 274


>ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|222853997|gb|EEE91544.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  228 bits (581), Expect = 1e-57
 Identities = 122/204 (59%), Positives = 150/204 (73%), Gaps = 8/204 (3%)
 Frame = +1

Query: 286 RSLVGLFSFSSII-PTCNKWLSNPCKMLALSGS-GSNVTGTMFGYKKGHVSFAVQEDSRS 459
           RS++ + SF +II P   KWLS P + L+L+ S G  VTGT+FG + GHVSFAVQ+D  S
Sbjct: 11  RSILKIISFPNIIIPKTCKWLSTPTQYLSLTPSLGRKVTGTLFGNRHGHVSFAVQDDPGS 70

Query: 460 EPVLLLEFAVPTCMLVQEMSSGLVRIALECEK------GSGRGIKLLQEPTWTMYCNGKR 621
           EPVLLLE ++ T MLV+EMSSGLVRIALECEK       +GR  KL  EPTWTMYCNG++
Sbjct: 71  EPVLLLELSISTAMLVKEMSSGLVRIALECEKVRAPQVQTGRPGKLFNEPTWTMYCNGRK 130

Query: 622 CGYAVSRTCSESDWYMLXXXXXXXXXXXXIPIDKNKITTNGMEGDQLMYMRAKFERVVGN 801
           CGYAVSR C+ SDWY+L            IP+ ++   + G EG +L+YMRAKFERVVG+
Sbjct: 131 CGYAVSRRCTYSDWYVLGTVQSVSVGAGVIPVVEDGRKSGGGEG-ELLYMRAKFERVVGS 189

Query: 802 RNSEAYYMMNPDGLGGPELSIFLL 873
           R+SEA+YMMNP+G GGPELSIFLL
Sbjct: 190 RDSEAFYMMNPEGNGGPELSIFLL 213


>ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792802 [Glycine max]
          Length = 294

 Score =  223 bits (569), Expect = 3e-56
 Identities = 126/273 (46%), Positives = 171/273 (62%), Gaps = 28/273 (10%)
 Frame = +1

Query: 139 TKQILPSNYVQSSPYQLDYNEVSDRPLVQKFGVIQLTQWYKPRN-------------VVE 279
           +++ILPSN      ++ D  +VSD+ LV++     ++  Y+ +              +  
Sbjct: 24  SRRILPSNLTHFRSFESD--DVSDKLLVRRGSSPSVSNLYQQQQQQHHAPKLTQQNKISS 81

Query: 280 MIRSLVGLFSFSSIIPTCNKWLSNPCKMLALSGSGSNVTGTMFGYKKGHVSFAVQEDSRS 459
           +IRS + +F+F ++IPTC KWL+ P ++      G  VTGT+FG+++GH+SFAVQ   R+
Sbjct: 82  LIRSFLNIFTFPTMIPTC-KWLTIPSQLSVTPSLGRKVTGTLFGHRRGHISFAVQLHPRA 140

Query: 460 EPVLLLEFAVPTCMLVQEMSSGLVRIALECEK------------GSGRGIKLLQEPTWTM 603
           EPVLLLE A+ T  LV+EMSS LVRIALEC+K            G GR  +L QEP WTM
Sbjct: 141 EPVLLLELAMSTSSLVKEMSSSLVRIALECQKVSVTAAVAHNNSGGGRR-RLFQEPAWTM 199

Query: 604 YCNGKRCGYAVSRTCSESDWYMLXXXXXXXXXXXXIPI---DKNKITTNGMEGDQLMYMR 774
           YCNG+ CGYAVSRTC + D ++L            IP+    K   + NG    +LMYMR
Sbjct: 200 YCNGRNCGYAVSRTCGDLDLHVLSTVQSVSVGAGVIPLLEDGKGGGSGNGGSEGELMYMR 259

Query: 775 AKFERVVGNRNSEAYYMMNPDGLGGPELSIFLL 873
           A+FERVVG+R+SEA+YM+NPDG GGPELSIFLL
Sbjct: 260 ARFERVVGSRDSEAFYMLNPDGNGGPELSIFLL 292


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