BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016907
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245...   304   1e-80
emb|CBI16571.3| unnamed protein product [Vitis vinifera]              304   1e-80
ref|XP_002523390.1| nuclear pore complex protein nup153, putativ...   296   3e-78
ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis th...   269   5e-70
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali...   269   5e-70

>ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245011 [Vitis vinifera]
          Length = 1696

 Score =  304 bits (779), Expect = 1e-80
 Identities = 154/288 (53%), Positives = 210/288 (72%), Gaps = 5/288 (1%)
 Frame = -2

Query: 855 SFDLQNP-PTHPLAVSESPPSLFLAHSQGFYVVRTKDVIQGAKERKD----CCIEEMSVV 691
           +F+L +P P+ PLAVSE    +F+AHS GF V RT+ VI+ AKE K+      I+E+SVV
Sbjct: 42  NFNLDSPLPSQPLAVSERSQLIFVAHSDGFCVARTEAVIELAKEIKEKGSGSSIQELSVV 101

Query: 690 NVQIGRVHIVAVSRDCSTLVACVGAKIYFFEIESLLNKEQEPFYSCSIDESSYVRDFRWR 511
           +V I  V I+A+S D STL A VG  I+FF ++SLLNK QEP ++ S+  SS V+D RWR
Sbjct: 102 DVPIANVRILALSTDSSTLAASVGGDIHFFSVDSLLNKGQEPSFTRSLSGSSSVKDMRWR 161

Query: 510 KKKSKTSFVVLSRNGKLYHGDLDIPLKEVMDNVDAVDWSTEGNCVVVAKTNYLSIFSSRF 331
           KK    S+VVLS +GKLYHG  + PLK+VMD VDAV+WS +GN + VA+ N LS+ SS+F
Sbjct: 162 KKMDN-SYVVLSSDGKLYHGAAEGPLKDVMDGVDAVEWSVKGNSIAVARKNTLSLLSSKF 220

Query: 330 RERFTLSIPLSSCVGDTDSKCTVKVDSINWVREDCIVLGCVLVTEDGKEDGYLIQIISSK 151
           +ER  +S+   S +GD+   CTVKVDSI WVR DCI+LGC  +T DGKE+ +++Q+++SK
Sbjct: 221 KERLCMSLSFKSWIGDSGVNCTVKVDSIRWVRPDCIILGCFKLTADGKEESFMVQVVTSK 280

Query: 150 DGKISEVSSKPVVLSFDRAFAAIDDDMMPFGSGPHLFMNYLEHRELAL 7
           +GKI++ SS P VLSF   F  + DD++PFGSGP+LF++YLE  +LA+
Sbjct: 281 EGKITDASSLPTVLSFYDVFPGLVDDIVPFGSGPYLFLSYLEQCQLAI 328


>emb|CBI16571.3| unnamed protein product [Vitis vinifera]
          Length = 1685

 Score =  304 bits (779), Expect = 1e-80
 Identities = 154/288 (53%), Positives = 210/288 (72%), Gaps = 5/288 (1%)
 Frame = -2

Query: 855 SFDLQNP-PTHPLAVSESPPSLFLAHSQGFYVVRTKDVIQGAKERKD----CCIEEMSVV 691
           +F+L +P P+ PLAVSE    +F+AHS GF V RT+ VI+ AKE K+      I+E+SVV
Sbjct: 42  NFNLDSPLPSQPLAVSERSQLIFVAHSDGFCVARTEAVIELAKEIKEKGSGSSIQELSVV 101

Query: 690 NVQIGRVHIVAVSRDCSTLVACVGAKIYFFEIESLLNKEQEPFYSCSIDESSYVRDFRWR 511
           +V I  V I+A+S D STL A VG  I+FF ++SLLNK QEP ++ S+  SS V+D RWR
Sbjct: 102 DVPIANVRILALSTDSSTLAASVGGDIHFFSVDSLLNKGQEPSFTRSLSGSSSVKDMRWR 161

Query: 510 KKKSKTSFVVLSRNGKLYHGDLDIPLKEVMDNVDAVDWSTEGNCVVVAKTNYLSIFSSRF 331
           KK    S+VVLS +GKLYHG  + PLK+VMD VDAV+WS +GN + VA+ N LS+ SS+F
Sbjct: 162 KKMDN-SYVVLSSDGKLYHGAAEGPLKDVMDGVDAVEWSVKGNSIAVARKNTLSLLSSKF 220

Query: 330 RERFTLSIPLSSCVGDTDSKCTVKVDSINWVREDCIVLGCVLVTEDGKEDGYLIQIISSK 151
           +ER  +S+   S +GD+   CTVKVDSI WVR DCI+LGC  +T DGKE+ +++Q+++SK
Sbjct: 221 KERLCMSLSFKSWIGDSGVNCTVKVDSIRWVRPDCIILGCFKLTADGKEESFMVQVVTSK 280

Query: 150 DGKISEVSSKPVVLSFDRAFAAIDDDMMPFGSGPHLFMNYLEHRELAL 7
           +GKI++ SS P VLSF   F  + DD++PFGSGP+LF++YLE  +LA+
Sbjct: 281 EGKITDASSLPTVLSFYDVFPGLVDDIVPFGSGPYLFLSYLEQCQLAI 328


>ref|XP_002523390.1| nuclear pore complex protein nup153, putative [Ricinus communis]
           gi|223537340|gb|EEF38969.1| nuclear pore complex protein
           nup153, putative [Ricinus communis]
          Length = 1824

 Score =  296 bits (759), Expect = 3e-78
 Identities = 152/296 (51%), Positives = 211/296 (71%), Gaps = 12/296 (4%)
 Frame = -2

Query: 852 FDLQNPPTHPLAVSESPPSLFLAHSQGFYVVRTKDVIQGAKERKDC--CIEEMSVVNVQI 679
           FDLQ+PP+ PLAVS     +FL HS GFYV RTKDV+  A+E K    CI+++S+ +V I
Sbjct: 52  FDLQSPPSSPLAVSPQHGLIFLVHSSGFYVARTKDVMDAAEEIKGTSPCIQDLSIADVPI 111

Query: 678 GRVHIVAVSRDCSTLVACVGAKIYFFEIESLLNKEQEPFYSCSIDE-SSYVRDFRWRKKK 502
           G+ HI+++S D STLV  V A ++FF ++SLLNKE +PF+SCS+ E +S+V+DF+WR++ 
Sbjct: 112 GKPHILSLSFDSSTLVVTVAAHLHFFLVDSLLNKEVKPFFSCSLSEPTSFVKDFKWRRR- 170

Query: 501 SKTSFVVLSRNGKLYHGD-LDIPLKEVMDNVDAVDWSTEGNCVVVAKTNYLSIFSSRFRE 325
           S +S+++LS +G LYH   LD PLK VMD+VDAV+WS +G  + VAK + L I SS F+E
Sbjct: 171 SDSSYLLLSNHGNLYHAAVLDSPLKLVMDDVDAVEWSLKGTYLAVAKAHILHILSSNFKE 230

Query: 324 RFTLSIPLSSCVGDTDSKCTVKVDSINWVREDCIVLGCVLVTEDGKEDGYLIQIISSKDG 145
           R  LS+P  S + D+D  C+VKVDSI WVR D IV+GC   T DGKE+ YL+Q+I SKDG
Sbjct: 231 RLRLSLPFKSWIADSDDSCSVKVDSIRWVRPDSIVVGCFQQTADGKEENYLVQVIRSKDG 290

Query: 144 KISEVS--------SKPVVLSFDRAFAAIDDDMMPFGSGPHLFMNYLEHRELALVA 1
           KI++VS         KP VLS+   F+ + DD++P+G+GP+L ++YL    LA+ A
Sbjct: 291 KITDVSVSFVALDLKKPSVLSYYDLFSGLIDDILPYGNGPYLLLSYLHECGLAITA 346


>ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis thaliana]
           gi|332195142|gb|AEE33263.1| Nuclear pore complex protein
           [Arabidopsis thaliana]
          Length = 1819

 Score =  269 bits (688), Expect = 5e-70
 Identities = 137/288 (47%), Positives = 196/288 (68%), Gaps = 4/288 (1%)
 Frame = -2

Query: 852 FDLQNPPTHPLAVSESPPSLFLAHSQGFYVVRTKDVIQGAKERKD----CCIEEMSVVNV 685
           +DL+NPP+ PLA+SE    LF+AHS GF+V RT DVI  +K          I+++S+V+V
Sbjct: 38  YDLENPPSQPLAISERHAVLFVAHSSGFFVGRTNDVISASKNSNGNGDKVFIQDLSLVDV 97

Query: 684 QIGRVHIVAVSRDCSTLVACVGAKIYFFEIESLLNKEQEPFYSCSIDESSYVRDFRWRKK 505
            +G V I+++S D S L   V A I+FF ++SLL K+ +P +S S DES +V+DFRWR+ 
Sbjct: 98  PVGDVRILSLSADDSILAVTVAADIHFFSVDSLLKKDAKPSFSYSPDESGFVKDFRWRRN 157

Query: 504 KSKTSFVVLSRNGKLYHGDLDIPLKEVMDNVDAVDWSTEGNCVVVAKTNYLSIFSSRFRE 325
             K S++VLS  GKL+HG  + P + VMD VDAV+WS++G+ + VA+ N L IFSS+F E
Sbjct: 158 -DKHSYLVLSNTGKLFHGIDNAPPRHVMDAVDAVEWSSKGSYIAVAQDNSLRIFSSKFNE 216

Query: 324 RFTLSIPLSSCVGDTDSKCTVKVDSINWVREDCIVLGCVLVTEDGKEDGYLIQIISSKDG 145
           +  +++   S +GD+D  C VKVDSI WVR +CI+LGC  + E G+E+ YL+Q+I S DG
Sbjct: 217 KRCIALSFDSWIGDSDEDCFVKVDSIRWVRNNCILLGCFQLIE-GREENYLVQVIRSPDG 275

Query: 144 KISEVSSKPVVLSFDRAFAAIDDDMMPFGSGPHLFMNYLEHRELALVA 1
           KIS+ S+  V LSF   F    DD++P G GPHL  +Y++  +LA+ A
Sbjct: 276 KISDGSTNLVALSFSDLFPCSMDDLVPVGVGPHLLFSYIDQCKLAVTA 323


>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
           gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
           [Arabidopsis thaliana]
          Length = 1816

 Score =  269 bits (688), Expect = 5e-70
 Identities = 137/288 (47%), Positives = 196/288 (68%), Gaps = 4/288 (1%)
 Frame = -2

Query: 852 FDLQNPPTHPLAVSESPPSLFLAHSQGFYVVRTKDVIQGAKERKD----CCIEEMSVVNV 685
           +DL+NPP+ PLA+SE    LF+AHS GF+V RT DVI  +K          I+++S+V+V
Sbjct: 38  YDLENPPSQPLAISERHAVLFVAHSSGFFVGRTNDVISASKNSNGNGDKVFIQDLSLVDV 97

Query: 684 QIGRVHIVAVSRDCSTLVACVGAKIYFFEIESLLNKEQEPFYSCSIDESSYVRDFRWRKK 505
            +G V I+++S D S L   V A I+FF ++SLL K+ +P +S S DES +V+DFRWR+ 
Sbjct: 98  PVGDVRILSLSADDSILAVTVAADIHFFSVDSLLKKDAKPSFSYSPDESGFVKDFRWRRN 157

Query: 504 KSKTSFVVLSRNGKLYHGDLDIPLKEVMDNVDAVDWSTEGNCVVVAKTNYLSIFSSRFRE 325
             K S++VLS  GKL+HG  + P + VMD VDAV+WS++G+ + VA+ N L IFSS+F E
Sbjct: 158 -DKHSYLVLSNTGKLFHGIDNAPPRHVMDAVDAVEWSSKGSYIAVAQDNSLRIFSSKFNE 216

Query: 324 RFTLSIPLSSCVGDTDSKCTVKVDSINWVREDCIVLGCVLVTEDGKEDGYLIQIISSKDG 145
           +  +++   S +GD+D  C VKVDSI WVR +CI+LGC  + E G+E+ YL+Q+I S DG
Sbjct: 217 KRCIALSFDSWIGDSDEDCFVKVDSIRWVRNNCILLGCFQLIE-GREENYLVQVIRSPDG 275

Query: 144 KISEVSSKPVVLSFDRAFAAIDDDMMPFGSGPHLFMNYLEHRELALVA 1
           KIS+ S+  V LSF   F    DD++P G GPHL  +Y++  +LA+ A
Sbjct: 276 KISDGSTNLVALSFSDLFPCSMDDLVPVGVGPHLLFSYIDQCKLAVTA 323