BLASTX nr result

ID: Coptis21_contig00016879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016879
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172133.1| PREDICTED: uncharacterized protein At1g08160...   111   3e-22
ref|XP_004140265.1| PREDICTED: uncharacterized protein At1g08160...   107   3e-21
ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|2...   103   5e-20
ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258...    94   4e-17
ref|NP_565642.1| late embryogenesis abundant hydroxyproline-rich...    93   1e-16

>ref|XP_004172133.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]
          Length = 248

 Score =  111 bits (277), Expect = 3e-22
 Identities = 77/244 (31%), Positives = 109/244 (44%), Gaps = 9/244 (3%)
 Frame = -3

Query: 812 DPNKTVTGYPA---SYPPTHPNYNPSEPNTCTGXXXXXXXXXXXXXXXXXXXXXXXXXXX 642
           DP++ VTGYPA     PP  PN +P                                   
Sbjct: 3   DPSRPVTGYPAYPNGRPPPPPNSHPQAQAYPYAAPPYSYPTQYANPYDSTHHNARLSFLR 62

Query: 641 XXXXXXXXXXXXFCTISSISWFAFRPHPPEFRIDWVYVPPINSSLNGFSSDWQVNYVVKN 462
                          I  I W   RP  PEFR+D   V   +++    S+ W + + V N
Sbjct: 63  ALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGFSVFN 122

Query: 461 PNK-MSLYYDEVDTGFFHNETFLFDIDVKPFDQEKKSEITLVARFKDVD---EDTVGTLI 294
           PNK M++ YD +D+  F+N  FL D  V PF QEKK++  + A F  +    E +    I
Sbjct: 123 PNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASSLNKI 182

Query: 293 SEDRKRGMVTFNVQLISWIRFNHGVLRTRFYLMTVVCNDVRVQFTV--VSGSGTLAGGLE 120
           ++DR+RG + FNV + + + F  G  RTR  L+ V+C D+ V F+    SGSG L G   
Sbjct: 183 NDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGESR 242

Query: 119 KCQV 108
            C+V
Sbjct: 243 ACRV 246


>ref|XP_004140265.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]
          Length = 243

 Score =  107 bits (268), Expect = 3e-21
 Identities = 75/237 (31%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
 Frame = -3

Query: 812 DPNKTVTGYPA---SYPPTHPNYNPSEPNTCTGXXXXXXXXXXXXXXXXXXXXXXXXXXX 642
           DP++ VTGYPA     PP  PN +P                                   
Sbjct: 3   DPSRPVTGYPAYPNGRPPPPPNSHPQAQAYPYAAPPYSYPTQYANPYDSTHHNARLSFLR 62

Query: 641 XXXXXXXXXXXXFCTISSISWFAFRPHPPEFRIDWVYVPPINSSLNGFSSDWQVNYVVKN 462
                          I  I W   RP  PEFR+D   V   +++    S+ W + + V N
Sbjct: 63  ALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGFSVFN 122

Query: 461 PNK-MSLYYDEVDTGFFHNETFLFDIDVKPFDQEKKSEITLVARFKDVD---EDTVGTLI 294
           PNK M++ YD +D+  F+N  FL D  V PF QEKK++  + A F  +    E +    I
Sbjct: 123 PNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASSLNKI 182

Query: 293 SEDRKRGMVTFNVQLISWIRFNHGVLRTRFYLMTVVCNDVRVQFTV--VSGSGTLAG 129
           ++DR+RG + FNV + + + F  G  RTR  L+ V+C D+ V F+    SGSG L G
Sbjct: 183 NDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIG 239


>ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|222849894|gb|EEE87441.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  103 bits (258), Expect = 5e-20
 Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
 Frame = -3

Query: 599 TISSISWFAFRPHPPEFRIDWVYVPPIN--SSLNGFSSDWQVNYVVKNPNKMSLYYDEVD 426
           TI  I W   RPH PEFR+  + V   N  SS +  S +W   + V NPNK+ + Y ++ 
Sbjct: 76  TILFIVWLVIRPHLPEFRVTSLSVSSFNASSSSSSVSGNWNARFQVYNPNKLKISYGDIQ 135

Query: 425 TGFFHNETFLFDIDVKPFDQEKKSEITLVARFKDVDEDTVGTLISE---DRKRGMVTFNV 255
           +  ++   FL    + PF Q KK+   + A +  +     G  +++   D+ RG V+FN+
Sbjct: 136 SSIYYKSEFLSQTRIPPFKQAKKNVTDINAEYGAMGSYIAGRAVNQINGDKGRGSVSFNL 195

Query: 254 QLISWIRFNHGVLRTRFYLMTVVCNDVRVQFTVVSGSGTLAGGLEKCQVY 105
           ++++   +  G  R R  L+ V C+D+ V  +   GSG L GG  +C+VY
Sbjct: 196 KIVADAVYRVGGFRARRRLLRVFCDDLAVGISGNGGSGNLTGGARRCKVY 245


>ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258714 [Vitis vinifera]
          Length = 239

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 64/251 (25%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
 Frame = -3

Query: 815 DDPNKTVTGYPA-SYPPTH-------------PNYNPSEPNTCTGXXXXXXXXXXXXXXX 678
           +DP++ VTGYPA  YP  H             P YNP+  +                   
Sbjct: 2   EDPHRPVTGYPAPGYPQPHSTATAYPYNAPPPPYYNPNAAHPYHAPPYSSPRATFLRRFL 61

Query: 677 XXXXXXXXXXXXXXXXXXXXXXXXFCTISSISWFAFRPHPPEFRIDWVYVPPINSSLNGF 498
                                     TI  I W   RP  P F +    +   N S +  
Sbjct: 62  AAMIAFFIIVG---------------TIIFIVWLVLRPRLPYFSVASASLSSFNVSASQL 106

Query: 497 SSDWQVNYVVKNPNK-MSLYYDEVDTGFFHNETFLFDIDVKPFDQEKKSEITLVARFKDV 321
           S +W +++ V+NPNK +S+ YD +++   +    L    + PF Q  K+E T+ A F  +
Sbjct: 107 SGEWNISFDVRNPNKKISISYDRIESSIAYKSATLSQTTIAPFYQGTKNETTVTATFAAI 166

Query: 320 DEDTVGTLISEDRKRGMVTFNVQLISWIRFNHGVLRTRFYLMTVVCNDVRVQFTVVSGSG 141
                   I+ +R RG V+F V++ + + F  GV + R   ++  CND+ +     +  G
Sbjct: 167 GAYVDVLAINAERTRGSVSFTVKVFARVSFKSGVWKARSRFLSAQCNDIALGLPSNASRG 226

Query: 140 TLAGGLEKCQV 108
           +L GG  +C+V
Sbjct: 227 SLVGGSRECRV 237


>ref|NP_565642.1| late embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana]
           gi|13272403|gb|AAK17140.1|AF325072_1 unknown protein
           [Arabidopsis thaliana] gi|5306271|gb|AAD42003.1|
           expressed protein [Arabidopsis thaliana]
           gi|15146320|gb|AAK83643.1| At2g27260/F12K2.16
           [Arabidopsis thaliana] gi|20147333|gb|AAM10380.1|
           At2g27260/F12K2.16 [Arabidopsis thaliana]
           gi|330252871|gb|AEC07965.1| late embryogenesis abundant
           hydroxyproline-rich glycoprotein [Arabidopsis thaliana]
          Length = 243

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 70/245 (28%), Positives = 106/245 (43%), Gaps = 9/245 (3%)
 Frame = -3

Query: 812 DPNKTVTGYPASYPPTHPNYNPSEPNTCTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 633
           DP++  TGYP  YP  +PN    +P T  G                              
Sbjct: 3   DPSRPATGYPYPYP--YPNPQQQQPPT-NGYPNPAAGTAYPYQNHNPYYAPQPNPRAVII 59

Query: 632 XXXXXXXXXFCTISSISWFAF----RPHPPEFRIDWVYVPPINSSLNGFSSDWQVNYVVK 465
                    F  +  +  F F    RP  P+  ++ + V   N S N  S  W +    +
Sbjct: 60  RRLFIVFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFR 119

Query: 464 NPN-KMSLYYDEVDTGFFHNETFLFDIDVKPFDQEKKSE----ITLVARFKDVDEDTVGT 300
           NPN KMSL+Y+      ++N   L +  ++PFDQ KK +     TL      VD   V +
Sbjct: 120 NPNSKMSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGRLVDS 179

Query: 299 LISEDRKRGMVTFNVQLISWIRFNHGVLRTRFYLMTVVCNDVRVQFTVVSGSGTLAGGLE 120
           +  E   +G V F++++IS++ F +G  R R Y +TV C+DV V   V SG G + G  +
Sbjct: 180 IGKERSVKGNVEFDLRMISYVTFRYGAFRRRRY-VTVYCDDVAVGVPVSSGEGKMVGSSK 238

Query: 119 KCQVY 105
           +C+ Y
Sbjct: 239 RCKTY 243


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