BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016876
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    97   2e-18
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    86   6e-15
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    86   8e-15
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    83   5e-14
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]     79   1e-12

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 23/237 (9%)
 Frame = +2

Query: 8    KYYRLNLPDDARVCRW-WGSPYGWLASIDLEQRLHLINPLSGTRRPLPDDELTEMEILNK 184
            K Y + LP+   V +W WGSPYGWL +I  +  + L+NPL+  +  LP   L     LN 
Sbjct: 992  KVYEIRLPEV--VGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLP--SLRACPNLNT 1047

Query: 185  VVVSCPSSSSANYDDQHKEFLVFALS------------ISQLAFTRPGDAGWTYIGHCF- 325
            ++ S    S +     +K  L  A S              +LAFT+PG   WT +     
Sbjct: 1048 LIDSSTQGSRSKDIFIYKAVLSSAPSSPDCAVMIIYSDYGRLAFTKPGHQTWTLLESESG 1107

Query: 326  -CNDVIRYKGQYYSVDSYGVTWLCDITSPCPKAIKLASSPH----KVVWPWTCYLVELQG 490
              +D+I + G + +V+     W+CDI+    K I+ A++P       +     YLVE  G
Sbjct: 1108 PVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGG 1167

Query: 491  QLHLVIRVMEGTCSK----MYTSFIRVYRLDLSTYKWQQLENLGDYAIFIGSNTSFS 649
            ++++V R +  T  +    M T    V +LD+   +W+++ENL   + F+G+N SFS
Sbjct: 1168 EIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFS 1224


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 74/255 (29%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
 Frame = +2

Query: 5   NKYYRLNLPDDARVCRWWGSPYGWLASIDLEQRLHLINPLSGTRRPLP------------ 148
           NK++ LNLP+ +   R  GS +GWL  +D    + LINPL+  +  LP            
Sbjct: 76  NKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVISFN 135

Query: 149 -DDELTEMEILN----KVVVSCPSS----------SSANYDDQHKEFLVFALSISQLAFT 283
             D   E  + N    +V VS              SS+   D +   +        LA+ 
Sbjct: 136 YSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYC 195

Query: 284 RPGDAGWTYIGHC--FCNDVIRYKGQYYSVDSYGVTWLCDITSPCPKAIKLASSPHKVVW 457
           R GD  W+ + +   FC DVI   G +Y+V+  G   +CDI+S  P+ +    +P +   
Sbjct: 196 RNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPR-VSFMETPRQAGG 254

Query: 458 PWTCYLVELQGQLHLVIRVMEGTCSKMY----------TSFIRVYRLDLSTYKWQQLENL 607
               YLV    +L LV R ++      +          T    V+RLD +  +W ++  L
Sbjct: 255 DMQ-YLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTL 313

Query: 608 GDYAIFIGSNTSFSL 652
           GD A+FIG N+S SL
Sbjct: 314 GDKALFIGENSSLSL 328


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 42/258 (16%)
 Frame = +2

Query: 5   NKYYRLNLPDDARVCRWWGSPYGWLASIDLEQRLHLINPLSGTRRPLPD----------- 151
           NK++ L LP+ +   R  GS +GWL  +D    + L+NPL+ ++  LP            
Sbjct: 73  NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFN 132

Query: 152 -------------------DELTEME--ILNKVVVSCPSSSSANYDDQHKEFLVFALSIS 268
                                L +M    + K ++S   SS AN  D     +V      
Sbjct: 133 FADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILS---SSPANGSDFIA--VVILNQTG 187

Query: 269 QLAFTRPGDAGWTYI--GHCFCNDVIRYKGQYYSVDSYGVTWLCDITSPCPKAIKLASSP 442
            LA  R  D  WT++     +  DVI ++G +Y+V+ YG   +CD++   P+ + +   P
Sbjct: 188 DLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPR-VSIIEMP 246

Query: 443 HKVVWPWTCYLVELQGQLHLVIRVMEGT-------CSKMY-TSFIRVYRLDLSTYKWQQL 598
            +       YLVE   +L LV R ++ T        S +Y T+  +V RLDL   +W+ +
Sbjct: 247 QQFGGDLQ-YLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVV 305

Query: 599 ENLGDYAIFIGSNTSFSL 652
            +LGD A+F+G N S SL
Sbjct: 306 SSLGDRALFLGENLSLSL 323


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 73/258 (28%), Positives = 116/258 (44%), Gaps = 42/258 (16%)
 Frame = +2

Query: 5   NKYYRLNLPDDARVCRWWGSPYGWLASIDLEQRLHLINPLSGTRRPLPD----------- 151
           NK++ L LP+ +   R  GS +GWL  +D    + L+NPL+ ++  LP            
Sbjct: 73  NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFN 132

Query: 152 -------------------DELTEME--ILNKVVVSCPSSSSANYDDQHKEFLVFALSIS 268
                                L +M    + K ++S   SS AN  D     +V      
Sbjct: 133 FADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILS---SSPANGSDFIA--VVILNQTG 187

Query: 269 QLAFTRPGDAGWTYI--GHCFCNDVIRYKGQYYSVDSYGVTWLCDITSPCPKAIKLASSP 442
            LA  R  D  WT++     +  DVI ++G +Y+V+ YG   +CD++   P+ + +   P
Sbjct: 188 DLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPR-VSIIEMP 246

Query: 443 HKVVWPWTCYLVELQGQLHLVIRVMEGT-------CSKMY-TSFIRVYRLDLSTYKWQQL 598
            +       YLVE   +L LV R ++ T        S +Y T+  +V RLD    +W+ +
Sbjct: 247 QQFGGDLQ-YLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVV 305

Query: 599 ENLGDYAIFIGSNTSFSL 652
            +LGD A+F+G N S SL
Sbjct: 306 SSLGDRALFLGENLSLSL 323


>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 74/261 (28%), Positives = 117/261 (44%), Gaps = 45/261 (17%)
 Frame = +2

Query: 2   ENKYYRLNLPDDARVCRWWGSPYGWLASIDLEQRLHLINPLSGTRRPLPD---------- 151
           +NK + L LP+ +   R  GS +GWL  +D    + L+NPL+  +  LP           
Sbjct: 70  DNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRLPPLSTFPNVVSF 129

Query: 152 --------------------DELTEME--ILNKVVVSCPSSSSANYDDQHKEFLVFAL-- 259
                                 L +M    + K+V+S   SS +N +D    FL  A+  
Sbjct: 130 DYSRVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLS---SSPSNQND----FLAVAILN 182

Query: 260 SISQLAFTRPGDAGWTYIGHC--FCNDVIRYKGQYYSVDSYGVTWLCDITSPCPKAIKLA 433
               LAF R G   WT++      C DVI   G +Y+VD YGV  L D+     + + L 
Sbjct: 183 HSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLMDLRGSRSQ-VSLV 241

Query: 434 SSPHKVVWPWTCYLVELQGQLHLVIRVME--------GTCSKMY-TSFIRVYRLDLSTYK 586
           ++  ++      YLV L  +L LV R ++           S MY T    V+R++    +
Sbjct: 242 ATERQLAGDIQ-YLVRLGQELLLVSRYLDIVNDGMDDELISVMYRTVRFEVFRMEWEGPR 300

Query: 587 WQQLENLGDYAIFIGSNTSFS 649
           W+++ENL + A+F+G N+S +
Sbjct: 301 WEKVENLNEMALFVGGNSSMA 321