BLASTX nr result
ID: Coptis21_contig00016871
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00016871 (468 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu... 258 5e-67 ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v... 253 1e-65 emb|CBI15756.3| unnamed protein product [Vitis vinifera] 253 1e-65 ref|XP_004156114.1| PREDICTED: protein MEI2-like 2-like [Cucumis... 251 6e-65 ref|XP_004140254.1| PREDICTED: protein MEI2-like 2-like [Cucumis... 251 6e-65 >ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis] gi|223550206|gb|EEF51693.1| RNA-binding protein, putative [Ricinus communis] Length = 972 Score = 258 bits (658), Expect = 5e-67 Identities = 124/160 (77%), Positives = 141/160 (88%), Gaps = 5/160 (3%) Frame = +3 Query: 3 RNSDF-----SLEGLTSSSIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRT 167 RNSDF +L+G ++ S+ G HPYG+HPSRTLFVRNINSN+EDSEL+ALFE YGDIRT Sbjct: 242 RNSDFVGALSNLQGGSNGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRT 301 Query: 168 LYTACKHRGFVMISYYDIRAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLA 347 LYTACKHRGFVMISYYDIRAA +A+R+LQNKP+RRR LDIH+SIPKDNPSEKDINQGTL Sbjct: 302 LYTACKHRGFVMISYYDIRAARNAMRSLQNKPLRRRKLDIHYSIPKDNPSEKDINQGTLV 361 Query: 348 VFNLDFSVSNDNLHKIFSVYGEIKEIRENPYKLHHKFIEF 467 +FNLD SVS + LHKIF VYGEIKEIRE P+K HHKFIE+ Sbjct: 362 IFNLDSSVSTEELHKIFGVYGEIKEIRETPHKRHHKFIEY 401 >ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera] Length = 991 Score = 253 bits (646), Expect = 1e-65 Identities = 124/160 (77%), Positives = 140/160 (87%), Gaps = 5/160 (3%) Frame = +3 Query: 3 RNSDFS-----LEGLTSSSIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRT 167 R+SDF+ +G ++ S+A HPYG+HPSRTLFVRNINSN+EDSELR LFE YGDIRT Sbjct: 243 RHSDFNGGIPNSQGGSNGSLASEHPYGEHPSRTLFVRNINSNVEDSELRDLFEQYGDIRT 302 Query: 168 LYTACKHRGFVMISYYDIRAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLA 347 LYTACKHRGFVMISYYDIRAA +A+RALQNKP+RRR LDIH+SIPKDNPSEKDINQGTL Sbjct: 303 LYTACKHRGFVMISYYDIRAARNAMRALQNKPLRRRKLDIHYSIPKDNPSEKDINQGTLV 362 Query: 348 VFNLDFSVSNDNLHKIFSVYGEIKEIRENPYKLHHKFIEF 467 VFNLD SVSND+L +IF +YGEIKEIRE P+K HHKFIEF Sbjct: 363 VFNLDSSVSNDDLRQIFGIYGEIKEIRETPHKRHHKFIEF 402 >emb|CBI15756.3| unnamed protein product [Vitis vinifera] Length = 998 Score = 253 bits (646), Expect = 1e-65 Identities = 124/160 (77%), Positives = 140/160 (87%), Gaps = 5/160 (3%) Frame = +3 Query: 3 RNSDFS-----LEGLTSSSIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRT 167 R+SDF+ +G ++ S+A HPYG+HPSRTLFVRNINSN+EDSELR LFE YGDIRT Sbjct: 249 RHSDFNGGIPNSQGGSNGSLASEHPYGEHPSRTLFVRNINSNVEDSELRDLFEQYGDIRT 308 Query: 168 LYTACKHRGFVMISYYDIRAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLA 347 LYTACKHRGFVMISYYDIRAA +A+RALQNKP+RRR LDIH+SIPKDNPSEKDINQGTL Sbjct: 309 LYTACKHRGFVMISYYDIRAARNAMRALQNKPLRRRKLDIHYSIPKDNPSEKDINQGTLV 368 Query: 348 VFNLDFSVSNDNLHKIFSVYGEIKEIRENPYKLHHKFIEF 467 VFNLD SVSND+L +IF +YGEIKEIRE P+K HHKFIEF Sbjct: 369 VFNLDSSVSNDDLRQIFGIYGEIKEIRETPHKRHHKFIEF 408 >ref|XP_004156114.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus] Length = 846 Score = 251 bits (640), Expect = 6e-65 Identities = 119/142 (83%), Positives = 130/142 (91%) Frame = +3 Query: 42 SIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRTLYTACKHRGFVMISYYDI 221 ++AG HPYG+HPSRTLFVRNINSN+ED+ELRALFE YGDIRTLYTACKHRGFVMISYYDI Sbjct: 178 TVAGEHPYGEHPSRTLFVRNINSNVEDAELRALFEQYGDIRTLYTACKHRGFVMISYYDI 237 Query: 222 RAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLAVFNLDFSVSNDNLHKIFS 401 RAA A+RALQNKP+RRR LDIHFSIPKDNPSEKDINQGTL VFNLD SVSND+L +IF Sbjct: 238 RAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRRIFG 297 Query: 402 VYGEIKEIRENPYKLHHKFIEF 467 YGE+KEIRE P+K HHKFIEF Sbjct: 298 AYGEVKEIRETPHKRHHKFIEF 319 >ref|XP_004140254.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus] Length = 846 Score = 251 bits (640), Expect = 6e-65 Identities = 119/142 (83%), Positives = 130/142 (91%) Frame = +3 Query: 42 SIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRTLYTACKHRGFVMISYYDI 221 ++AG HPYG+HPSRTLFVRNINSN+ED+ELRALFE YGDIRTLYTACKHRGFVMISYYDI Sbjct: 178 TVAGEHPYGEHPSRTLFVRNINSNVEDAELRALFEQYGDIRTLYTACKHRGFVMISYYDI 237 Query: 222 RAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLAVFNLDFSVSNDNLHKIFS 401 RAA A+RALQNKP+RRR LDIHFSIPKDNPSEKDINQGTL VFNLD SVSND+L +IF Sbjct: 238 RAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRRIFG 297 Query: 402 VYGEIKEIRENPYKLHHKFIEF 467 YGE+KEIRE P+K HHKFIEF Sbjct: 298 AYGEVKEIRETPHKRHHKFIEF 319