BLASTX nr result

ID: Coptis21_contig00016871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016871
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu...   258   5e-67
ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   253   1e-65
emb|CBI15756.3| unnamed protein product [Vitis vinifera]              253   1e-65
ref|XP_004156114.1| PREDICTED: protein MEI2-like 2-like [Cucumis...   251   6e-65
ref|XP_004140254.1| PREDICTED: protein MEI2-like 2-like [Cucumis...   251   6e-65

>ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
           gi|223550206|gb|EEF51693.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 972

 Score =  258 bits (658), Expect = 5e-67
 Identities = 124/160 (77%), Positives = 141/160 (88%), Gaps = 5/160 (3%)
 Frame = +3

Query: 3   RNSDF-----SLEGLTSSSIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRT 167
           RNSDF     +L+G ++ S+ G HPYG+HPSRTLFVRNINSN+EDSEL+ALFE YGDIRT
Sbjct: 242 RNSDFVGALSNLQGGSNGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRT 301

Query: 168 LYTACKHRGFVMISYYDIRAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLA 347
           LYTACKHRGFVMISYYDIRAA +A+R+LQNKP+RRR LDIH+SIPKDNPSEKDINQGTL 
Sbjct: 302 LYTACKHRGFVMISYYDIRAARNAMRSLQNKPLRRRKLDIHYSIPKDNPSEKDINQGTLV 361

Query: 348 VFNLDFSVSNDNLHKIFSVYGEIKEIRENPYKLHHKFIEF 467
           +FNLD SVS + LHKIF VYGEIKEIRE P+K HHKFIE+
Sbjct: 362 IFNLDSSVSTEELHKIFGVYGEIKEIRETPHKRHHKFIEY 401


>ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 991

 Score =  253 bits (646), Expect = 1e-65
 Identities = 124/160 (77%), Positives = 140/160 (87%), Gaps = 5/160 (3%)
 Frame = +3

Query: 3   RNSDFS-----LEGLTSSSIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRT 167
           R+SDF+      +G ++ S+A  HPYG+HPSRTLFVRNINSN+EDSELR LFE YGDIRT
Sbjct: 243 RHSDFNGGIPNSQGGSNGSLASEHPYGEHPSRTLFVRNINSNVEDSELRDLFEQYGDIRT 302

Query: 168 LYTACKHRGFVMISYYDIRAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLA 347
           LYTACKHRGFVMISYYDIRAA +A+RALQNKP+RRR LDIH+SIPKDNPSEKDINQGTL 
Sbjct: 303 LYTACKHRGFVMISYYDIRAARNAMRALQNKPLRRRKLDIHYSIPKDNPSEKDINQGTLV 362

Query: 348 VFNLDFSVSNDNLHKIFSVYGEIKEIRENPYKLHHKFIEF 467
           VFNLD SVSND+L +IF +YGEIKEIRE P+K HHKFIEF
Sbjct: 363 VFNLDSSVSNDDLRQIFGIYGEIKEIRETPHKRHHKFIEF 402


>emb|CBI15756.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score =  253 bits (646), Expect = 1e-65
 Identities = 124/160 (77%), Positives = 140/160 (87%), Gaps = 5/160 (3%)
 Frame = +3

Query: 3   RNSDFS-----LEGLTSSSIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRT 167
           R+SDF+      +G ++ S+A  HPYG+HPSRTLFVRNINSN+EDSELR LFE YGDIRT
Sbjct: 249 RHSDFNGGIPNSQGGSNGSLASEHPYGEHPSRTLFVRNINSNVEDSELRDLFEQYGDIRT 308

Query: 168 LYTACKHRGFVMISYYDIRAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLA 347
           LYTACKHRGFVMISYYDIRAA +A+RALQNKP+RRR LDIH+SIPKDNPSEKDINQGTL 
Sbjct: 309 LYTACKHRGFVMISYYDIRAARNAMRALQNKPLRRRKLDIHYSIPKDNPSEKDINQGTLV 368

Query: 348 VFNLDFSVSNDNLHKIFSVYGEIKEIRENPYKLHHKFIEF 467
           VFNLD SVSND+L +IF +YGEIKEIRE P+K HHKFIEF
Sbjct: 369 VFNLDSSVSNDDLRQIFGIYGEIKEIRETPHKRHHKFIEF 408


>ref|XP_004156114.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
          Length = 846

 Score =  251 bits (640), Expect = 6e-65
 Identities = 119/142 (83%), Positives = 130/142 (91%)
 Frame = +3

Query: 42  SIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRTLYTACKHRGFVMISYYDI 221
           ++AG HPYG+HPSRTLFVRNINSN+ED+ELRALFE YGDIRTLYTACKHRGFVMISYYDI
Sbjct: 178 TVAGEHPYGEHPSRTLFVRNINSNVEDAELRALFEQYGDIRTLYTACKHRGFVMISYYDI 237

Query: 222 RAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLAVFNLDFSVSNDNLHKIFS 401
           RAA  A+RALQNKP+RRR LDIHFSIPKDNPSEKDINQGTL VFNLD SVSND+L +IF 
Sbjct: 238 RAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRRIFG 297

Query: 402 VYGEIKEIRENPYKLHHKFIEF 467
            YGE+KEIRE P+K HHKFIEF
Sbjct: 298 AYGEVKEIRETPHKRHHKFIEF 319


>ref|XP_004140254.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
          Length = 846

 Score =  251 bits (640), Expect = 6e-65
 Identities = 119/142 (83%), Positives = 130/142 (91%)
 Frame = +3

Query: 42  SIAGLHPYGKHPSRTLFVRNINSNLEDSELRALFEHYGDIRTLYTACKHRGFVMISYYDI 221
           ++AG HPYG+HPSRTLFVRNINSN+ED+ELRALFE YGDIRTLYTACKHRGFVMISYYDI
Sbjct: 178 TVAGEHPYGEHPSRTLFVRNINSNVEDAELRALFEQYGDIRTLYTACKHRGFVMISYYDI 237

Query: 222 RAACDAIRALQNKPVRRRNLDIHFSIPKDNPSEKDINQGTLAVFNLDFSVSNDNLHKIFS 401
           RAA  A+RALQNKP+RRR LDIHFSIPKDNPSEKDINQGTL VFNLD SVSND+L +IF 
Sbjct: 238 RAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRRIFG 297

Query: 402 VYGEIKEIRENPYKLHHKFIEF 467
            YGE+KEIRE P+K HHKFIEF
Sbjct: 298 AYGEVKEIRETPHKRHHKFIEF 319


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