BLASTX nr result
ID: Coptis21_contig00016867
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00016867
(1749 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein... 171 4e-40
ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 166 1e-38
ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|2... 165 4e-38
ref|XP_003565629.1| PREDICTED: F-box protein At4g09920-like [Bra... 163 2e-37
ref|XP_002305656.1| predicted protein [Populus trichocarpa] gi|2... 149 2e-33
>ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein At5g54820-like
[Brachypodium distachyon]
Length = 522
Score = 171 bits (434), Expect = 4e-40
Identities = 149/524 (28%), Positives = 243/524 (46%), Gaps = 40/524 (7%)
Frame = -1
Query: 1623 DRISELPDGILESILSFLPIKVALRSSVLSKRWRNLWKYLWVHATTLDF-GKEFAKAQTQ 1447
DR+S LPD +L SIL+ LP K A+R+S LS+RW LW + + LDF +F + ++
Sbjct: 11 DRLSGLPDDVLHSILARLPFKHAVRTSALSRRWPRLWLHALAASPVLDFTDPDFVRGHSR 70
Query: 1446 EQFVNTVNQYLQLHSGNKIEKFLLHFYPGEHYKANVEKWIEFAVLRGVEELDL-IFCQAT 1270
QFV TVN+ L + + F P ++ +V WI A+ G E+D+ + Q
Sbjct: 71 AQFVATVNRCLSARGAAPLRALRVAFSPFGAFERDVVGWISAALGSGATEVDVDLRAQGR 130
Query: 1269 EKYTLVEF-------GEY-KVEIDLLAILF-GYDSLVHLRTSHIEL-NLPIDFTGFSSLQ 1120
+ +E G + + E++L LF SL L S L ++P G + L
Sbjct: 131 RRSGGIEADAEDDGGGTFRRTEVELRGDLFCSPSSLSRLSLSRFSLRHVPPGAAGLAGLT 190
Query: 1119 TLCLNQVSITDDTLESIVSKCPLLTNLYLRYCYNLGSIKVAGPNLQLKTLSVIVTDAYEV 940
+L L+ V +TDD L VS CP+L L LR C L ++++AG +L+ L V+ ++
Sbjct: 191 SLSLSHVDVTDDALRDAVSGCPVLEFLSLRSCDLLSNVRIAGG--RLRGLEVVRCQVRQL 248
Query: 939 HIFAPNLKSVHFHGDILY------------GYDFRNVS--------ALEDVFISAYGCEH 820
+ AP L+S FHGD++Y G NV+ L D ++S
Sbjct: 249 QVAAPALESFAFHGDLMYLREDDSKPLEFIGSKGNNVTPPPSEATPELRDAYLSHVDFSG 308
Query: 819 TEPEHD---FIQIFSGVSHIKILTMCIAPPMHIAMLEEYIPDNLPLSLPNLQELQILIGG 649
+ D + + + V+H KILT+C +HI EE + PNLQELQ+L+ G
Sbjct: 309 EDEVFDGFAYTEFLNKVAHAKILTICSVALLHIE--EERFFSMPTIDTPNLQELQVLM-G 365
Query: 648 QIGEEYLGYTFCFFKHTICPCLEKLFIDLSGSYAPWEPDTAKEAEEPS-----SCFFYNL 484
+G++ FF+ P LE+LFI L P + D E E+ L
Sbjct: 366 SLGDDDDTRFPDFFELAAPPLLERLFIQL-----PADCDGDSEEEDTDMVPGHEISLGRL 420
Query: 483 QIVKITSFRGSDTEMKMVKFFLDKXXXXXXXXXXXXSDFHLEKDIDNIKDGDGVASQSEN 304
+K+ +FRG+ E+++++F + + D + + G + ++
Sbjct: 421 TFIKVANFRGTRRELRLLRFLVGMAPALEQLVL-------VTPDPEAEQGGTTLRHDDQD 473
Query: 303 CNVPLRILHDQLLKLPKASTDAQILLFEHWEVDTSPKHKHAAYH 172
L+I+ +QL ++ KA D ++ D S + H+ Y+
Sbjct: 474 KQQLLQIVQEQLSEVRKARRDQAHVVVCRARDDGSRRPAHSKYY 517
>ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Brachypodium
distachyon]
Length = 520
Score = 166 bits (421), Expect = 1e-38
Identities = 138/441 (31%), Positives = 214/441 (48%), Gaps = 39/441 (8%)
Frame = -1
Query: 1623 DRISELPDGILESILSFLPIKVALRSSVLSKRWRNLWKYLWVHATTLDF-GKEFAKAQTQ 1447
DR+S LPD +L SI+ +P K A+R++ LS+RW LW + + LDF + F ++Q++
Sbjct: 11 DRLSGLPDDVLHSIIGRVPFKQAVRTNALSRRWPRLWLHALAASGVLDFTDRGFVRSQSR 70
Query: 1446 EQFVNTVNQYLQLHSGN-KIEKFLLHFYPGEHYKANVEKWIEFAVLRGVEELDLIFCQAT 1270
V TVN+ L++ G I+ + P ++ +V WI A+ RG E+D+ Q
Sbjct: 71 AHIVATVNRCLRVRGGGAPIDVLRVSLCPFGAFERDVVGWIAAALRRGAREVDVNLTQGR 130
Query: 1269 EKYTLVEFGEYKVEIDLLAILF-GYDSLVHLRTSHIEL-NLPIDFTGFSSLQTLCLNQVS 1096
+ F + E++L LF SL L L N+P G + L +L L V
Sbjct: 131 VELG-AAFVNCRTELELPGDLFCAESSLARLSLGRCSLSNVPPGAPGLAGLTSLSLTHVD 189
Query: 1095 ITDDTLESIVSKCPLLTNLYLRYCYNLGSIKVAGPNLQLKTLSVI-VTDAYEVHIFAPNL 919
ITDD + V+ C LL L LR C+ L +++AG N L+ L V+ D ++ + AP L
Sbjct: 190 ITDDAVRDTVACCRLLEFLSLRNCHLLKFVRIAGEN--LRGLEVVGCLDVRQLQVAAPAL 247
Query: 918 KSVHFHGDILYGYDFRNVSALE------------------------DVFISAYGC-EHTE 814
+S FHGDILY + +R +LE D ++S G + +
Sbjct: 248 ESFAFHGDILY-FKYREDESLEFEPVEFIGKGNNTQTPSEATPLLRDAYLSHIGFGVYDD 306
Query: 813 PEHDFI--QIFSGVSHIKILTMCIAPPMHIAMLEEYIPDNLPLSLPNLQELQILIGGQIG 640
P H+F + V+H KILT+C +HI + L + PNLQELQ+L+
Sbjct: 307 PLHEFAFSNLMEKVAHAKILTICSVGLLHIEETCNFY--ELMIDTPNLQELQLLMDSMDD 364
Query: 639 EEYLGYTFCFFKHTICPCLEKLFIDLSGSYAPWEPD---TAKEAEEPSSCFFY----NLQ 481
++ + FF T P LE+LFI L + TA +E F +L
Sbjct: 365 DDVTRIS-GFFHPTPPPLLERLFIRLPAAACEHTNSGGATAIGNDEDIVLDFEIALDHLT 423
Query: 480 IVKITSFRGSDTEMKMVKFFL 418
+K+ +FRG+ EM++++F L
Sbjct: 424 FIKLVNFRGTRREMRLLRFVL 444
>ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|222859724|gb|EEE97271.1|
predicted protein [Populus trichocarpa]
Length = 496
Score = 165 bits (417), Expect = 4e-38
Identities = 153/504 (30%), Positives = 239/504 (47%), Gaps = 25/504 (4%)
Frame = -1
Query: 1611 ELPDGILESILSFLPIKVALRSSVLSKRWRNLWKYLWVHATTLDFGKEFAKAQTQEQFVN 1432
+LPD +L+ I SFLPIK A++ +LS R++N W + LDF +FA+ ++ E F +
Sbjct: 46 DLPDDVLDMIFSFLPIKKAMQIGILSTRFKNSWNF----NRRLDFDNDFARGRSPEDFKS 101
Query: 1431 TVNQYLQLHSGNKIEKFLLHFYPGEHYKANVEKWIEFAVLRGVEELDLIFCQATEKYTLV 1252
VN+ H+G++I F L F P + VEKWI ++ +GVEELDL F Q+ +
Sbjct: 102 IVNKVFDRHAGSRILSFRLCFDPNRE-ELLVEKWIRKSIEKGVEELDLEFYQSGNVF--- 157
Query: 1251 EFGEYKVEIDLLAILFGYDSLVHLRTSHIELNLPIDFTGFSSLQTLCLNQVSITDDTLES 1072
E + L + ++ +SL L+ + +L+LP G L TL L ++ IT +++
Sbjct: 158 ---EGRWPFKLNSDVYEAESLKILKLTLCQLDLPPKLKGLHVLNTLVLRKIIITPTLIDT 214
Query: 1071 IVSKCPLLTNLYLRYCYNLGSIKVAGPNLQLKTLSVI-VTDAYE---VHIFAPNLKSVHF 904
+ C L L L +C+ + +K+ KT V+ V D E ++I APNL+S H+
Sbjct: 215 LFQNCFFLETLDLAHCHRIFHLKI----FAQKTFKVLKVGDCQEILRIYIDAPNLRSFHY 270
Query: 903 HGDILYGYDFRNVSALEDVFISAYGCEHTEPEHDFIQIFSGVSHIKILTMCIAPPMHIAM 724
G + + F +V L+DV +S P F + F ++ L + P +
Sbjct: 271 CGHVCF-IKFNSVPQLKDVMLS------FRPSKGFTETF----RVRNLVYDLHPIQVLTT 319
Query: 723 LEEYIPDNLPLSL-PNLQELQILIGGQIGEEYL---GYTFC-------FFKHTICPCLEK 577
++ P + L+E+Q G + E +L G +C F KH CP LEK
Sbjct: 320 TSTFLEGLSPKFIGGKLREMQFFF-GNLKEFHLIMEGAIYCNPYDIISFLKH--CPSLEK 376
Query: 576 LFIDLS------GSYAPWEPDTAKEAEEPSSCFFYNLQIVKITSFRGSDTEMKMVKFFLD 415
+FIDL G Y WE +++ + S F L+ +K+ F+ E+ +VKFFL+
Sbjct: 377 IFIDLKDFCFVRGPY--WELHN-RQSFQKYSASFDCLKFIKLPGFKFQKDELMLVKFFLE 433
Query: 414 KXXXXXXXXXXXXSDFHLEKDIDNIKDGDGVASQSENCNV--PLRILHDQLLKLPKASTD 241
+ LEK + V +S + V P + Q L+ KAS
Sbjct: 434 RA-------------IFLEKLV-------LVTPKSRHARVLTPNLQAYYQYLQSWKASPG 473
Query: 240 AQILLFEHWEVDTS--PKHKHAAY 175
AQI +FEH DTS P H Y
Sbjct: 474 AQIAVFEHLN-DTSVCPMHSKTWY 496
>ref|XP_003565629.1| PREDICTED: F-box protein At4g09920-like [Brachypodium distachyon]
Length = 496
Score = 163 bits (412), Expect = 2e-37
Identities = 136/441 (30%), Positives = 214/441 (48%), Gaps = 35/441 (7%)
Frame = -1
Query: 1635 EKSCDRISELPDGILESILSFLPIKVALRSSVLSKRWRNLWKYLWVHATTLDF-GKEFAK 1459
E+ DR+S LPD +L SI+ +P K A+R++ LS+RW LW + + LDF + F +
Sbjct: 7 EEPQDRLSGLPDDVLHSIIGRVPFKQAVRTNALSRRWPRLWLHALAASGVLDFTDRGFVR 66
Query: 1458 AQTQEQFVNTVNQYLQLHSGN-KIEKFLLHFYPGEHYKANVEKWIEFAVLRGVEELDLIF 1282
+Q++ V TVN+ L++ G I+ + P ++ +V WI A+ RG E+D+
Sbjct: 67 SQSRAHIVATVNRCLRVRGGGAPIDVLRVSLCPFGAFERDVVGWIAAALRRGAREVDVNL 126
Query: 1281 CQATEKYTLVEFGEYKVEIDLLAILF-GYDSLVHLRTSHIEL-NLPIDFTGFSSLQTLCL 1108
Q + F + E++L LF SL L L N+P G + L +L L
Sbjct: 127 TQGRVELG-AAFVNCRTELELPGDLFCAESSLARLSLGRCSLSNVPPGAPGLAGLTSLSL 185
Query: 1107 NQVSITDDTLESIVSKCPLLTNLYLRYCYNLGSIKVAGPNLQLKTLSVI-VTDAYEVHIF 931
V ITDD + V+ C LL L LR C+ L +++AG +L+ L V+ D ++ +
Sbjct: 186 THVDITDDAVRDTVACCRLLEFLSLRNCHVLKFVRIAGE--KLRGLEVVGCLDVRQLQVA 243
Query: 930 APNLKSVHFHGDILY-----GYDFRNVS---------------ALEDVFISAYGC-EHTE 814
AP L+S FHGDIL G++F V L D ++S G + +
Sbjct: 244 APALESFAFHGDILCFGEDDGFEFEPVEFIGKGNTRTPSEATPELRDAYLSHIGFGVYDD 303
Query: 813 PEHDFI--QIFSGVSHIKILTMCIAPPMHIAMLEEYIPDNLPLSLPNLQELQILIGGQIG 640
P H+F + V+H KILT+C +HI +I + LQELQ+L+
Sbjct: 304 PLHEFAFSNLMEKVAHAKILTICSVGLLHIEEERGFIEHMMDPPNLQLQELQLLMDSMGD 363
Query: 639 EEYLGYTFCFFKHTICPCLEKLFIDLSGSYAPWEPD----TAKEAEEPSSCF---FYNLQ 481
+ G++ FF+ T P LE+LFI L + + E E+ F +L
Sbjct: 364 DVVTGFS-SFFQLTAPPLLERLFIRLPAAACEHTNSGGMMSIGEDEDIVLDFEIALDHLT 422
Query: 480 IVKITSFRGSDTEMKMVKFFL 418
K+ +FRG+ EM++++F L
Sbjct: 423 FFKMVNFRGTRREMRLLRFVL 443
>ref|XP_002305656.1| predicted protein [Populus trichocarpa] gi|222848620|gb|EEE86167.1|
predicted protein [Populus trichocarpa]
Length = 490
Score = 149 bits (376), Expect = 2e-33
Identities = 122/420 (29%), Positives = 207/420 (49%), Gaps = 23/420 (5%)
Frame = -1
Query: 1608 LPDGILESILSFLPIKVALRSSVLSKRWRNLWKYLWVHATTLDFGKEFAKAQTQEQFVNT 1429
LPD +L+ IL+FLPIK A++ +LS R + + W+ + L F +FA+ ++ E F +
Sbjct: 37 LPDDVLDKILAFLPIKKAMQIGILSSR----FNHSWIFSRRLHFDNDFARGRSPENFKSM 92
Query: 1428 VNQYLQLHSGNKIEKFLLHF-YPGEHYKANVEKWIEFAVLRGVEELDLIFCQATEKYTLV 1252
VN+ H+G+ I F L F GE + VEKWI+ A+ +GVEEL+L F Y +
Sbjct: 93 VNKVFDQHAGSSILSFRLSFDADGEGFL--VEKWIKKAIEKGVEELELYF------YVIG 144
Query: 1251 EFGEYKVEIDLLAILFGYDSLVHLRTSHIELNLPIDFTGFSSLQTLCLNQVSITDDTLES 1072
E + L++ ++ +S+ L+ S +L+LP +F G L TL L ++ +T +++
Sbjct: 145 INFEGGGPVKLISDVYDVESIKILKLSFCQLDLPPEFKGLHFLSTLVLRKIIVTPTLIDN 204
Query: 1071 IVSKCPLLTNLYLRYCYNLGSIKVAGPNLQLKTLSVIVTDAYE---VHIFAPNLKSVHFH 901
+ C LL L + CY + +K++ NL+ K + V D E + I AP L ++H+
Sbjct: 205 LFLNCLLLETLDIAQCYRIFHLKISTQNLK-KFKELKVGDCPEILMIDIDAPTLHAIHYC 263
Query: 900 GDILYGYDFRNVSALEDVFISAYGCEHTEPEHDFIQIFSGVSHIKILTMC------IAPP 739
G + + F N+ ++DV ++ + + + +I++LT + P
Sbjct: 264 GHVCF-IKFTNIPEVKDVMLNFGPSKGFTGTFQVRNLVYDLYNIRVLTTTSTFLEGLTPK 322
Query: 738 MHIAMLEEYIPDNLPLSLPNLQELQILIGGQIGEEYLGYTFC-------FFKHTICPCLE 580
L E + S NL E +++ G + +C F K+ C +E
Sbjct: 323 FMGGTLTE-----MQFSFWNLIEFHLIMEGAM--------YCNPYDIVSFLKN--CQYVE 367
Query: 579 KLFIDLS------GSYAPWEPDTAKEAEEPSSCFFYNLQIVKITSFRGSDTEMKMVKFFL 418
K+FIDL G Y WE ++A E S F+NL+ +K+ F+ E+ +VKF L
Sbjct: 368 KIFIDLKDFNFVCGPY--WELRN-RQAFEQSHVSFHNLKFIKLYGFKFQKDELLLVKFLL 424