BLASTX nr result

ID: Coptis21_contig00016866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016866
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521951.1| conserved hypothetical protein [Ricinus comm...    62   1e-07
ref|XP_002332009.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
ref|XP_002332012.1| predicted protein [Populus trichocarpa] gi|2...    61   3e-07
ref|XP_003632740.1| PREDICTED: uncharacterized protein LOC100243...    59   9e-07
ref|XP_002322621.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06

>ref|XP_002521951.1| conserved hypothetical protein [Ricinus communis]
           gi|223538755|gb|EEF40355.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 133

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
 Frame = -3

Query: 547 RQSTKVKAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNI----DSIPSAMTNVAA 380
           ++ TK K KP+KI YISNP + +A N  EFR IVQELTG+ S +    D  P   ++  A
Sbjct: 18  QKHTKNKKKPVKITYISNPTLVRATNASEFRAIVQELTGKDSKVLDTWDPDPYTTSHEEA 77

Query: 379 VNKISSYVAPKMVPKATLIDESVDYELPSVSSSAESADD 263
            +++ +Y +    P + +  ESV     S +SS+   DD
Sbjct: 78  ASQVPNYES----PSSKIDSESVADAFSSYTSSSLELDD 112


>ref|XP_002332009.1| predicted protein [Populus trichocarpa] gi|222875234|gb|EEF12365.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = -3

Query: 571 QPHHPKLKRQSTKVKAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNIDSIPSAMT 392
           Q   PK  ++STK K +P+KI YIS+P M KA N  EFR IVQELTG+ S ++    A  
Sbjct: 11  QQEQPKKGQKSTKNKREPIKIKYISSPTMVKATNATEFRAIVQELTGKDSKVEDPSDA-- 68

Query: 391 NVAAVNKISSYVAPKMVPKATLIDESVDYELPSVSSSAESADDYFSM-EMLENFDGLQYP 215
           N  A +++  +  P+         ESVD    + +     A+D F   ++ E    LQYP
Sbjct: 69  NEEASHQVPRHGTPRFDV------ESVDGAFNNNTPPFLQAEDGFVWGDVSERAFELQYP 122

Query: 214 FI 209
            +
Sbjct: 123 CV 124


>ref|XP_002332012.1| predicted protein [Populus trichocarpa] gi|222875237|gb|EEF12368.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
 Frame = -3

Query: 571 QPHHPKLKRQSTKVKAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNIDSIPSAMT 392
           Q   PK  ++STK K +P+KI YIS+P M KA N  EFR IVQELTG+ S ++    A  
Sbjct: 11  QQEQPKKGQKSTKNKREPIKIKYISSPTMVKATNATEFRAIVQELTGKDSKVEDPCDA-- 68

Query: 391 NVAAVNKISSYVAPKMVPKATLIDESVDYEL-PSVSSSAESADDYFSMEMLENFDGLQYP 215
                N+ +S V     P+  +  ESVD     + S   +  D +   ++ E    LQYP
Sbjct: 69  -----NEEASQVPRHGTPRFDV--ESVDGAFCNNTSPFLQKEDGFVWGDVSERAFELQYP 121

Query: 214 FI 209
            +
Sbjct: 122 CV 123


>ref|XP_003632740.1| PREDICTED: uncharacterized protein LOC100243497 [Vitis vinifera]
          Length = 143

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
 Frame = -3

Query: 589 MDK-LRVQPHHPKLKRQSTKVKAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNID 413
           MDK L V       K ++ K   KP K+VYI NP M K     EFR +VQELTGQ ++I 
Sbjct: 1   MDKALSVDQRKASGKAKAKKTTTKPFKVVYIGNPRMVKVKE-SEFRALVQELTGQDADI- 58

Query: 412 SIPSAMTNVAAVNKISSYVAPKMVPKATLIDESVDYELPSVSSS----------AESADD 263
           S P+    +  V         + VP     +  ++ ++P V              E  DD
Sbjct: 59  SDPTVFEEIHDVG------GNQKVPDVANNENELELDVPPVDRGDEPPQMSDIPMEQLDD 112

Query: 262 YFSMEMLENFDGL 224
            F+ ++LENF GL
Sbjct: 113 VFTPQLLENFTGL 125


>ref|XP_002322621.1| predicted protein [Populus trichocarpa] gi|222867251|gb|EEF04382.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 14/123 (11%)
 Frame = -3

Query: 550 KRQSTKV---KAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNIDSIPSAMTNVAA 380
           +R+ TK+   K KPMK+VYISNPM FK  +   FR +VQELTGQ S +   P+ + +   
Sbjct: 15  ERKGTKIAKTKKKPMKVVYISNPMKFKI-SASGFRALVQELTGQDSELPD-PTKIVDDDD 72

Query: 379 VNKISSYVAPKMVPKATLIDESVDYELPSVSSSAE-----------SADDYFSMEMLENF 233
                +Y       K T++D+    E+P+   S E           S DD F  +MLEN 
Sbjct: 73  HGVGGNYRTVSNASK-TVVDDHCALEVPTKDPSQEQPPARQDAPFGSFDDVFMPQMLENV 131

Query: 232 DGL 224
            G+
Sbjct: 132 AGI 134


Top