BLASTX nr result

ID: Coptis21_contig00016857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016857
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634377.1| PREDICTED: uncharacterized protein LOC100259...   116   2e-24
gb|AFW89742.1| cell growth defect factor 2 [Zea mays]                 115   5e-24
ref|NP_001148819.1| cell growth defect factor 2 [Zea mays] gi|19...   115   5e-24
ref|XP_002306907.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002465948.1| hypothetical protein SORBIDRAFT_01g048740 [S...   112   4e-23

>ref|XP_003634377.1| PREDICTED: uncharacterized protein LOC100259103 isoform 2 [Vitis
           vinifera] gi|359492197|ref|XP_002280550.2| PREDICTED:
           uncharacterized protein LOC100259103 isoform 1 [Vitis
           vinifera] gi|302142607|emb|CBI19810.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/110 (56%), Positives = 71/110 (64%)
 Frame = -1

Query: 565 RGYXXXXXXXXXXXXXXXXAKFFSSQFVKYGFVIVFNVMMWGCYVSSLKALSSLQATVTN 386
           RGY                AK FSSQ +KYG VI+FNV MWGCYV+SLKALSSLQATVTN
Sbjct: 7   RGYAWAISAGVNAALAAISAKLFSSQVIKYGLVIIFNVTMWGCYVNSLKALSSLQATVTN 66

Query: 385 FATNXXXXXXXXXXXFDETISTKWFVGALLIVLGVFILSKSSVETKTHSD 236
           FA N           F+E +  +WF GALLIV+GVFILSKSS+E K  +D
Sbjct: 67  FAANFLSSGLAGFFLFEEALPFQWFAGALLIVIGVFILSKSSIERKASTD 116


>gb|AFW89742.1| cell growth defect factor 2 [Zea mays]
          Length = 114

 Score =  115 bits (288), Expect = 5e-24
 Identities = 58/90 (64%), Positives = 67/90 (74%)
 Frame = -1

Query: 505 KFFSSQFVKYGFVIVFNVMMWGCYVSSLKALSSLQATVTNFATNXXXXXXXXXXXFDETI 326
           KFFS+  +KYG VI+FNV MWGCYV+SLKALSSLQATVTNFA N           FDE +
Sbjct: 25  KFFSTLLLKYGMVILFNVTMWGCYVNSLKALSSLQATVTNFAANFISSGLAGCFLFDEPL 84

Query: 325 STKWFVGALLIVLGVFILSKSSVETKTHSD 236
            +KWF GA LI+ GVFILSKSS+E K +SD
Sbjct: 85  PSKWFAGASLIIFGVFILSKSSIEEKQNSD 114


>ref|NP_001148819.1| cell growth defect factor 2 [Zea mays] gi|195622376|gb|ACG33018.1|
           cell growth defect factor 2 [Zea mays]
          Length = 114

 Score =  115 bits (288), Expect = 5e-24
 Identities = 58/90 (64%), Positives = 67/90 (74%)
 Frame = -1

Query: 505 KFFSSQFVKYGFVIVFNVMMWGCYVSSLKALSSLQATVTNFATNXXXXXXXXXXXFDETI 326
           KFFS+  +KYG VI+FNV MWGCYV+SLKALSSLQATVTNFA N           FDE +
Sbjct: 25  KFFSTLLLKYGMVILFNVTMWGCYVNSLKALSSLQATVTNFAANFISSGLAGCFLFDEPL 84

Query: 325 STKWFVGALLIVLGVFILSKSSVETKTHSD 236
            +KWF GA LI+ GVFILSKSS+E K +SD
Sbjct: 85  PSKWFAGASLIIFGVFILSKSSIEEKQNSD 114


>ref|XP_002306907.1| predicted protein [Populus trichocarpa] gi|222856356|gb|EEE93903.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  114 bits (285), Expect = 1e-23
 Identities = 58/90 (64%), Positives = 66/90 (73%)
 Frame = -1

Query: 505 KFFSSQFVKYGFVIVFNVMMWGCYVSSLKALSSLQATVTNFATNXXXXXXXXXXXFDETI 326
           KFFS Q +KYG V++FNV MWGCYV+SLKALSSLQATVTNFA N           F ET+
Sbjct: 27  KFFSYQVIKYGLVVLFNVTMWGCYVNSLKALSSLQATVTNFAANFLSSGLAGFFLFKETL 86

Query: 325 STKWFVGALLIVLGVFILSKSSVETKTHSD 236
           S +WF GALLIV+GV ILSKSS+E K   D
Sbjct: 87  SVQWFAGALLIVIGVVILSKSSIERKESID 116


>ref|XP_002465948.1| hypothetical protein SORBIDRAFT_01g048740 [Sorghum bicolor]
           gi|241919802|gb|EER92946.1| hypothetical protein
           SORBIDRAFT_01g048740 [Sorghum bicolor]
          Length = 114

 Score =  112 bits (280), Expect = 4e-23
 Identities = 55/90 (61%), Positives = 67/90 (74%)
 Frame = -1

Query: 505 KFFSSQFVKYGFVIVFNVMMWGCYVSSLKALSSLQATVTNFATNXXXXXXXXXXXFDETI 326
           KFF++  +KYG VI FNV MWGCYV+SLKALSSLQATVTNFA N           F+E +
Sbjct: 25  KFFATLLLKYGMVIAFNVTMWGCYVNSLKALSSLQATVTNFAANFISSGLAGYFLFEEPL 84

Query: 325 STKWFVGALLIVLGVFILSKSSVETKTHSD 236
            +KWF GA LI+LGVF+LSKSS+E K ++D
Sbjct: 85  PSKWFAGASLIILGVFVLSKSSIEEKPNTD 114


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