BLASTX nr result

ID: Coptis21_contig00016854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016854
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH10646.1| Prephenate dehydratase [Hevea brasiliensis]           522   e-146
emb|CBI16254.3| unnamed protein product [Vitis vinifera]              520   e-145
ref|XP_002312713.1| arogenate/prephenate dehydratase [Populus tr...   518   e-144
ref|XP_004149566.1| PREDICTED: LOW QUALITY PROTEIN: arogenate de...   516   e-144
ref|XP_002282017.2| PREDICTED: arogenate dehydratase/prephenate ...   513   e-143

>dbj|BAH10646.1| Prephenate dehydratase [Hevea brasiliensis]
          Length = 390

 Score =  522 bits (1345), Expect = e-146
 Identities = 271/344 (78%), Positives = 299/344 (86%), Gaps = 8/344 (2%)
 Frame = -2

Query: 1245 VVSSSQGDKNK-----NNSSSQAIELQRIFEDSQSR---PRPLSVTDLSSSVNQGSRLLR 1090
            V++S  G+  +       ++  A++LQ    D  SR   PRPLS +  SSSV+ GSRL R
Sbjct: 46   VLASLHGENERAIEADGKNTQTALQLQDSPYDVVSRDALPRPLSSSQSSSSVSDGSRL-R 104

Query: 1089 VAYQGLPGAYSESAAAKAYPNCEAVPCEQFETAFAAVERWLVDRAVLPIENSLGGSIHRN 910
            VAYQG+ GAYSESAA KAYPNCEAVPCEQF+ AF AVERWLVDRAVLPIENSLGGSIHRN
Sbjct: 105  VAYQGVRGAYSESAAEKAYPNCEAVPCEQFDAAFEAVERWLVDRAVLPIENSLGGSIHRN 164

Query: 909  YDLLLRHSLHIVGEVRLSVRHCLLANHGVRLEDLKRVLSHPQALAQCENTLTKLGVVREA 730
            YDLLLRH LHIVGEV+ +VRHCLLANHGV++EDLKRVLSHPQALAQCE+TLT LG+VREA
Sbjct: 165  YDLLLRHRLHIVGEVKYAVRHCLLANHGVKVEDLKRVLSHPQALAQCEHTLTSLGLVREA 224

Query: 729  VDDTAGAAQHVALHKLQDAGAVASSGASRIYGLNILAEDIQDDSDNVTRFLMLAREPIIP 550
            VDDTAGAA+HVALHKL+D GAVASS A++IYGLNILAEDIQDD DNVTRFLMLAREPIIP
Sbjct: 225  VDDTAGAAKHVALHKLKDTGAVASSVAAKIYGLNILAEDIQDDCDNVTRFLMLAREPIIP 284

Query: 549  RTDRPFKTSIVFSLEEGPGVLFKALAVFAMRQINLTKIESRPRRKQRMRASDDNDNGSPK 370
             TDRPFKTSIVFSLEEGPGVLFKALAVFA+RQINLTKIESRP R Q +RASDD+DNG PK
Sbjct: 285  GTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRASDDSDNGFPK 344

Query: 369  YFDYLFYVDFEASMADPNSQNALRHLEEFATFLRVLGSYPADNS 238
            YFDYLFYVDFEASMAD N+QNAL+HL+EFATFLRVLGSYP D S
Sbjct: 345  YFDYLFYVDFEASMADQNAQNALKHLKEFATFLRVLGSYPVDTS 388


>emb|CBI16254.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  520 bits (1338), Expect = e-145
 Identities = 268/336 (79%), Positives = 293/336 (87%), Gaps = 9/336 (2%)
 Frame = -2

Query: 1218 NKNNSSSQAIELQRIFED---------SQSRPRPLSVTDLSSSVNQGSRLLRVAYQGLPG 1066
            N N+ ++++ ELQR  ED         S S PRPLS T LS+ ++  SRL RVAYQG+ G
Sbjct: 52   NDNDENAKSRELQRSLEDFPSETLSKGSHSLPRPLSSTHLSNKLSDRSRL-RVAYQGVHG 110

Query: 1065 AYSESAAAKAYPNCEAVPCEQFETAFAAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHS 886
            AYSESAA KAYPNC+AVPCEQFETAF AVE WLVDRAVLPIENSLGGSIHRNYDLLLRH 
Sbjct: 111  AYSESAAEKAYPNCQAVPCEQFETAFEAVESWLVDRAVLPIENSLGGSIHRNYDLLLRHR 170

Query: 885  LHIVGEVRLSVRHCLLANHGVRLEDLKRVLSHPQALAQCENTLTKLGVVREAVDDTAGAA 706
            LHIVGEV+ +VRHCLLANHGV++EDLKRVLSH QALAQCENTLTKLG+VREAVDDTAGAA
Sbjct: 171  LHIVGEVKFAVRHCLLANHGVKVEDLKRVLSHSQALAQCENTLTKLGLVREAVDDTAGAA 230

Query: 705  QHVALHKLQDAGAVASSGASRIYGLNILAEDIQDDSDNVTRFLMLAREPIIPRTDRPFKT 526
            + +A HKL+D GAVASS A+RIYGL ILA+DIQDDS NVTRFLMLAREPIIP TDRPFKT
Sbjct: 231  KFIAFHKLKDVGAVASSAAARIYGLKILAQDIQDDSYNVTRFLMLAREPIIPGTDRPFKT 290

Query: 525  SIVFSLEEGPGVLFKALAVFAMRQINLTKIESRPRRKQRMRASDDNDNGSPKYFDYLFYV 346
            SIVFSLEEGPGVLFKALAVFA+RQINLTKIESRP R Q +RAS+D +NGSPKYFDYLFYV
Sbjct: 291  SIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRASNDTNNGSPKYFDYLFYV 350

Query: 345  DFEASMADPNSQNALRHLEEFATFLRVLGSYPADNS 238
            DFEASMAD NSQNALRHL+EFATFLRVLGSYP D S
Sbjct: 351  DFEASMADQNSQNALRHLKEFATFLRVLGSYPVDTS 386


>ref|XP_002312713.1| arogenate/prephenate dehydratase [Populus trichocarpa]
            gi|222852533|gb|EEE90080.1| arogenate/prephenate
            dehydratase [Populus trichocarpa]
          Length = 398

 Score =  518 bits (1334), Expect = e-144
 Identities = 271/337 (80%), Positives = 296/337 (87%), Gaps = 5/337 (1%)
 Frame = -2

Query: 1233 SQGDKNKNNSSSQAIELQRIFEDSQSR---PRPLSVTDLSSSVNQGSRLLRVAYQGLPGA 1063
            +Q  KN N  + Q+  LQ    D  S+   PRPLS + LS+SV+ GSRL RVAYQG+ GA
Sbjct: 61   AQKKKNGNAKNIQSNLLQDAEYDVASKDAHPRPLSSSHLSNSVSNGSRL-RVAYQGVRGA 119

Query: 1062 YSESAAAKAYPNCEAVPCEQFETAFAAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHSL 883
            YSESAA KAYPNCEAVPCEQF+TAF +VERWLVDRAVLPIENSLGGSIHRNYDLLLRH L
Sbjct: 120  YSESAAQKAYPNCEAVPCEQFDTAFESVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRL 179

Query: 882  HIVGEVRLSVRHCLLANHGVRLEDLKRVLSHPQALAQCENTLTKLGVVREAVDDTAGAAQ 703
            HIVGEV+ +VRHCLLANHGV++EDLKRVLSHPQALAQCENTLTKLG+VREAVDDTAGAA+
Sbjct: 180  HIVGEVKYAVRHCLLANHGVKVEDLKRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAK 239

Query: 702  HVALHKLQDAGAVASSGASRIYGLNILAEDIQDDSDNVTRFLMLAREPIIPRTDRPFK-- 529
            HVAL KL+D GAVASS A+ IYGLNILAEDIQDDSDNVTRFL+LAREPIIP TDRPFK  
Sbjct: 240  HVALQKLEDTGAVASSAAASIYGLNILAEDIQDDSDNVTRFLILAREPIIPGTDRPFKIQ 299

Query: 528  TSIVFSLEEGPGVLFKALAVFAMRQINLTKIESRPRRKQRMRASDDNDNGSPKYFDYLFY 349
            TSIVFSLEEGPGVLFKALAVFA+RQINLTKIESRP RKQ +RASDD ++G PKYFDYLFY
Sbjct: 300  TSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRKQPLRASDDGNSGLPKYFDYLFY 359

Query: 348  VDFEASMADPNSQNALRHLEEFATFLRVLGSYPADNS 238
            VDFEASMAD N+QNALRHL+EFATFLRVLGSYP   S
Sbjct: 360  VDFEASMADENAQNALRHLKEFATFLRVLGSYPVHTS 396


>ref|XP_004149566.1| PREDICTED: LOW QUALITY PROTEIN: arogenate dehydratase/prephenate
            dehydratase 2, chloroplastic-like [Cucumis sativus]
          Length = 428

 Score =  516 bits (1330), Expect = e-144
 Identities = 263/325 (80%), Positives = 287/325 (88%)
 Frame = -2

Query: 1206 SSSQAIELQRIFEDSQSRPRPLSVTDLSSSVNQGSRLLRVAYQGLPGAYSESAAAKAYPN 1027
            SS +    + + +D  + PRPLS T   SSV+ GSRL RVAYQG+PGAYSE+AA KAYPN
Sbjct: 66   SSMEDSHFEVVIKDPNTLPRPLSST--KSSVSSGSRL-RVAYQGVPGAYSEAAAGKAYPN 122

Query: 1026 CEAVPCEQFETAFAAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVRLSVRH 847
            CEAVPCEQF+ AF AVERW+VDRAVLPIENSLGGSIHRNYDLLLRH LHIVGEV+  VRH
Sbjct: 123  CEAVPCEQFDAAFEAVERWIVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFVVRH 182

Query: 846  CLLANHGVRLEDLKRVLSHPQALAQCENTLTKLGVVREAVDDTAGAAQHVALHKLQDAGA 667
            CLLANHGV++E+LKRVLSHPQALAQCENTLT LG+VREAVDDTAGAA+HVA HKL+DAGA
Sbjct: 183  CLLANHGVKIEELKRVLSHPQALAQCENTLTGLGLVREAVDDTAGAAKHVAFHKLKDAGA 242

Query: 666  VASSGASRIYGLNILAEDIQDDSDNVTRFLMLAREPIIPRTDRPFKTSIVFSLEEGPGVL 487
            VASS A+ IYGLNILAEDIQDDSDNVTRFLMLAREPIIP  DRPFKTSIVFSLEEGPG+L
Sbjct: 243  VASSVAASIYGLNILAEDIQDDSDNVTRFLMLAREPIIPGIDRPFKTSIVFSLEEGPGIL 302

Query: 486  FKALAVFAMRQINLTKIESRPRRKQRMRASDDNDNGSPKYFDYLFYVDFEASMADPNSQN 307
            FKALAVFA+RQINLTKIESRP R Q +R+SDDN  GS KYFDYLFYVDFEASMAD N+QN
Sbjct: 303  FKALAVFALRQINLTKIESRPLRNQPLRSSDDNGYGSSKYFDYLFYVDFEASMADQNAQN 362

Query: 306  ALRHLEEFATFLRVLGSYPADNSRP 232
            ALRHL+EFATFLRVLGSYP D S P
Sbjct: 363  ALRHLKEFATFLRVLGSYPMDTSMP 387


>ref|XP_002282017.2| PREDICTED: arogenate dehydratase/prephenate dehydratase 2,
            chloroplastic-like [Vitis vinifera]
          Length = 391

 Score =  513 bits (1321), Expect = e-143
 Identities = 264/330 (80%), Positives = 290/330 (87%), Gaps = 3/330 (0%)
 Frame = -2

Query: 1218 NKNNSSSQAIELQRIFEDSQSRPR---PLSVTDLSSSVNQGSRLLRVAYQGLPGAYSESA 1048
            N N+ ++++ ELQR  ED  S      PLS T LS+ ++  SRL RVAYQG+ GAYSESA
Sbjct: 52   NDNDENAKSRELQRSLEDFPSETLSKGPLSSTHLSNKLSDRSRL-RVAYQGVHGAYSESA 110

Query: 1047 AAKAYPNCEAVPCEQFETAFAAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGE 868
            A KAYPNC+AVPCEQFETAF AVE WLVDRAVLPIENSLGGSIHRNYDLLLRH LHIVGE
Sbjct: 111  AEKAYPNCQAVPCEQFETAFEAVESWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGE 170

Query: 867  VRLSVRHCLLANHGVRLEDLKRVLSHPQALAQCENTLTKLGVVREAVDDTAGAAQHVALH 688
            V+ +VRHCLLANHGV++EDLKRVLSH QALAQCENTLTKLG+VREAVDDTAGAA+ +A H
Sbjct: 171  VKFAVRHCLLANHGVKVEDLKRVLSHSQALAQCENTLTKLGLVREAVDDTAGAAKFIAFH 230

Query: 687  KLQDAGAVASSGASRIYGLNILAEDIQDDSDNVTRFLMLAREPIIPRTDRPFKTSIVFSL 508
            KL+D GAVASS A+RIYGL ILA+DIQDDS NVTRFLMLAREPIIP TDRPFKTSIVFSL
Sbjct: 231  KLKDVGAVASSAAARIYGLKILAQDIQDDSYNVTRFLMLAREPIIPGTDRPFKTSIVFSL 290

Query: 507  EEGPGVLFKALAVFAMRQINLTKIESRPRRKQRMRASDDNDNGSPKYFDYLFYVDFEASM 328
            EEGPGVLFKALAVFA+RQINLTKIESRP R Q +RAS+D +NGSPKYFDYLFYVDFEASM
Sbjct: 291  EEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRASNDTNNGSPKYFDYLFYVDFEASM 350

Query: 327  ADPNSQNALRHLEEFATFLRVLGSYPADNS 238
            AD NSQNALRHL+EFATFLRVLGSYP D +
Sbjct: 351  ADQNSQNALRHLKEFATFLRVLGSYPVDRT 380


Top