BLASTX nr result

ID: Coptis21_contig00016852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016852
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26677.3| unnamed protein product [Vitis vinifera]              150   5e-34
ref|XP_002317326.1| predicted protein [Populus trichocarpa] gi|2...   142   1e-31
ref|XP_002529461.1| conserved hypothetical protein [Ricinus comm...   134   5e-29
ref|XP_003617604.1| hypothetical protein MTR_5g093430 [Medicago ...   115   2e-23
ref|XP_003617605.1| hypothetical protein MTR_5g093440 [Medicago ...   111   4e-22

>emb|CBI26677.3| unnamed protein product [Vitis vinifera]
          Length = 203

 Score =  150 bits (380), Expect = 5e-34
 Identities = 95/207 (45%), Positives = 121/207 (58%), Gaps = 9/207 (4%)
 Frame = -1

Query: 1141 MEKSQKFQIVKVSLIAIFFFITPLLSPWMRPPYLYFLL-NLLIVALGAEAGLLSFLKPRD 965
            M+K++K Q++K+ LIA   FITPLLS  +R  YLYF++ NLLI+ALGAEAGLLSF KP  
Sbjct: 1    MDKAKKSQMLKLFLIAAVLFITPLLSSSLRTTYLYFIIINLLIIALGAEAGLLSFSKPPQ 60

Query: 964  DKKTLLFAPKPIVATAKVIP--ELSCDKEANEVINNGNL----PXXXXXXXXXXXXXXXX 803
            DKK  +    P+ A     P  + + DKEA+    +  L    P                
Sbjct: 61   DKKYAV----PVSAKPLSTPPDQAAPDKEASSNSTDTGLLLTTPERTEKKAKVAEKSASE 116

Query: 802  XXXXXXXVRTLKKCPSTPSIFFIGGGXXXXXXXXXXXXXXXXEGC--LSGQELFTQAETF 629
                   +  ++KCPSTPS+FFIGGG                E    LSGQELFT+AETF
Sbjct: 117  KIVGAAKLSKVRKCPSTPSLFFIGGGEAEAEEAVGDIEEEDQEEVDGLSGQELFTKAETF 176

Query: 628  IGNFYKQLKIQREDSWRKLHDFYHKAF 548
            IGNFY QLK+QRE+SW++LH+FY KAF
Sbjct: 177  IGNFYNQLKMQREESWKRLHEFYQKAF 203


>ref|XP_002317326.1| predicted protein [Populus trichocarpa] gi|222860391|gb|EEE97938.1|
            predicted protein [Populus trichocarpa]
          Length = 203

 Score =  142 bits (359), Expect = 1e-31
 Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 13/211 (6%)
 Frame = -1

Query: 1141 MEKSQKFQIVKVSLIAIFFFITPLLSPWMRPPYLYFLLNLLIVALGAEAGLLS--FLKPR 968
            M K ++ QI+ +S++A   F+TPL+S  +RP YLYF++NLLI+ALG EAGL+S  F KP 
Sbjct: 1    MSKLKRSQILMLSILAALLFVTPLISSSLRPKYLYFIMNLLIIALGVEAGLISAAFSKPV 60

Query: 967  DDKKTLLFAP---KPIVATAKVIPE---LSCDKEANEVINNGNLPXXXXXXXXXXXXXXX 806
            +  K     P   KP  +     P+    S   +ANE      +                
Sbjct: 61   EQYKKHAVVPLTTKPARSFVTAPPDQYQASTTDQANEAPAKAKV--------LEKSSSEN 112

Query: 805  XXXXXXXXVRTLKKCPSTPSIFFIGGGXXXXXXXXXXXXXXXXE-----GCLSGQELFTQ 641
                       +KKCPS PS+FFIGGG                E     G +SGQELFT+
Sbjct: 113  IVSTVVKVDHKVKKCPSLPSLFFIGGGDHGTKAVEDVTEEHEEEAEGEVGGISGQELFTK 172

Query: 640  AETFIGNFYKQLKIQREDSWRKLHDFYHKAF 548
            AETFIGNFYKQLK+QRE+SW+++H FYHKAF
Sbjct: 173  AETFIGNFYKQLKMQREESWKRIHGFYHKAF 203


>ref|XP_002529461.1| conserved hypothetical protein [Ricinus communis]
            gi|223531077|gb|EEF32927.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 193

 Score =  134 bits (337), Expect = 5e-29
 Identities = 91/218 (41%), Positives = 115/218 (52%), Gaps = 20/218 (9%)
 Frame = -1

Query: 1141 MEKSQKFQIVKVSLIAIFFFITPLLSPWMRPPYLYFLLNLLIVALGAEAGLLS--FLKP- 971
            M K +K Q++ ++L+A   F+TPLLS  +RP YLYF++NLLIVALGAEAGLLS  F KP 
Sbjct: 1    MSKFKKSQVLMLTLLAALLFVTPLLSSSIRPKYLYFIINLLIVALGAEAGLLSAAFSKPI 60

Query: 970  -RDDKKTLLFAPKPIVAT-----------AKVIPELSCDKEANEVINNGNLPXXXXXXXX 827
               D+K     P P+              AKV      +K A+E I   +          
Sbjct: 61   LDHDRKH----PVPVSTAQDHHQSSSPEQAKVSKTRVVEKSASEKIVRSS---------- 106

Query: 826  XXXXXXXXXXXXXXXVRTLKKCPSTPSIFFIGGGXXXXXXXXXXXXXXXXEG-----CLS 662
                           V  +KKCPS PS+FFIG G                        +S
Sbjct: 107  -----------SITKVEKVKKCPSMPSLFFIGSGETEVVDQDVVQEHEEEAEEEEVEGIS 155

Query: 661  GQELFTQAETFIGNFYKQLKIQREDSWRKLHDFYHKAF 548
            GQELFT+AETFIGNFYKQLK+QRE+SW+++H FY KAF
Sbjct: 156  GQELFTKAETFIGNFYKQLKMQREESWKRIHGFYQKAF 193


>ref|XP_003617604.1| hypothetical protein MTR_5g093430 [Medicago truncatula]
            gi|355518939|gb|AET00563.1| hypothetical protein
            MTR_5g093430 [Medicago truncatula]
          Length = 194

 Score =  115 bits (288), Expect = 2e-23
 Identities = 75/195 (38%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
 Frame = -1

Query: 1141 MEKSQKFQIVKVSLIAIFFFITPLLSPWMRPPYLYFLLNLLIVALGAEAGLLSFL-KPRD 965
            M K  K Q++ +S++ +   ITPLL   +RP YLY + N+LI+ALGAEAGLLS L +P +
Sbjct: 3    MNKVNKSQVIVLSILLLLLVITPLLPSSLRPTYLYLIFNILIIALGAEAGLLSVLSEPSE 62

Query: 964  DKKTLLFAPKPIVATAKVIPELSCDKEANEVINNG-------NLPXXXXXXXXXXXXXXX 806
            DKK  +   +P     +       +KEA+ +INN        N                 
Sbjct: 63   DKKQHVSVTQPKHEMLE-----QEEKEASNIINNAYSVSEEQNENKPKVVEKSVSEKKIV 117

Query: 805  XXXXXXXXVRTLKKCPSTPSIFFIGGGXXXXXXXXXXXXXXXXEGCLSGQELFTQAETFI 626
                    V  +KKCPS PSIFFI  G                   ++GQELF +AE FI
Sbjct: 118  YVDVGVSKVDKVKKCPSMPSIFFIEDGEDDLEVKDEEVEVEDEICGVNGQELFAKAEAFI 177

Query: 625  GNFYKQLKIQREDSW 581
            GNFYKQLK+QRE+ W
Sbjct: 178  GNFYKQLKMQREECW 192


>ref|XP_003617605.1| hypothetical protein MTR_5g093440 [Medicago truncatula]
            gi|355518940|gb|AET00564.1| hypothetical protein
            MTR_5g093440 [Medicago truncatula]
          Length = 198

 Score =  111 bits (277), Expect = 4e-22
 Identities = 74/192 (38%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
 Frame = -1

Query: 1141 MEKSQKFQIVKVSLIAIFFFITPLLSPWMRPPYLYFLLNLLIVALGAEAGLLS-FLKPRD 965
            M K  K Q++ +S +A    ITP L  ++RP YLY + NLLI+ALGAEAGLLS F +P +
Sbjct: 3    MNKVDKSQVIVLSFLAFLLVITPFLPSFLRPSYLYLIFNLLIIALGAEAGLLSVFSEPSE 62

Query: 964  DKKTLLFAPKPIVATAKVIPELSCDKEANEVINNG-----NLPXXXXXXXXXXXXXXXXX 800
            D+K  + A      T K +     +KEA  ++NN                          
Sbjct: 63   DRKQHISAS----VTQKHVSLEPQEKEARGIVNNACSVSQEQKEKKPKVVEKSTSEKKIV 118

Query: 799  XXXXXXVRTLKKCPSTPSIFFIGGGXXXXXXXXXXXXXXXXEGCLSGQELFTQAETFIGN 620
                  V  +KKCPS  SIFFI  G                   ++GQELF +AE FIGN
Sbjct: 119  FVGVTKVEKMKKCPSMASIFFIEDGEDDLEVKNEEVEVEDEIYGVNGQELFAKAEAFIGN 178

Query: 619  FYKQLKIQREDS 584
            FYKQLK+QRE S
Sbjct: 179  FYKQLKMQREKS 190


Top