BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016831
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615067.1| hypothetical protein MTR_5g063260 [Medicago ...    86   1e-14
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    79   2e-12
ref|NP_178215.1| zinc ion binding / nucleic acid binding [Arabid...    78   4e-12
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    77   8e-12
dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like...    75   2e-11

>ref|XP_003615067.1| hypothetical protein MTR_5g063260 [Medicago truncatula]
            gi|355516402|gb|AES98025.1| hypothetical protein
            MTR_5g063260 [Medicago truncatula]
          Length = 532

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 78/296 (26%), Positives = 122/296 (41%), Gaps = 9/296 (3%)
 Frame = -3

Query: 1125 KISRWSHQFDPTQ-DSALAPVWVEFYDLPYHLFNPGMLIPIASMIGKYLTIDQATLTMST 949
            K+  W+H F+P+   ++ A VWV  Y L    + P +L  IAS +G  L  D  T   S 
Sbjct: 151  KLFAWTHDFNPSVIQNSTAQVWVPIYGLSQEYWRPKILFAIASSVGTPLCTDAVT---SK 207

Query: 948  PLV-------ARICVEVDLSKPLPAKLKITDPIYMDFWQEVVYDRLPRYCTYCSLQGHNA 790
            P +       AR+ V++DLS  L  K+ +    Y  F+ E+ YD LP +C+ C + GHN 
Sbjct: 208  PAMDRTFGHFARVLVDMDLSNDLKYKVLVERKGYA-FFVELGYDNLPAFCSNCKITGHNI 266

Query: 789  SDCRKLNPNGSTTRGEVVHDTAHINHVGPSTHARKQKRILDKQMKEQSEKNKSFLSNQNG 610
              CRK+N      R          NH+ P     +   + D    + ++K+K        
Sbjct: 267  EKCRKVNEPSKQARQTEKETNEVRNHMEPINVDMEPINVDD----DDTQKDK-------- 314

Query: 609  GDFFYHSSAELQQDVRREHIINDNTPPSQNHVNIGASLGADKVLDGLETPSNWAATSADG 430
                     ++QQD+          P   +  N+ A +  + ++   ETP          
Sbjct: 315  ---------DVQQDM----------PAESSRQNLEAEIEMEPII--CETPKQSYLEEEAR 353

Query: 429  QNGLKNNPAVEIYHDSETILVDDSSFIEETQV-GHVSQGKLEVDPKKGMSVRRQKN 265
            Q+  K  P      D E    +DS F+E T   G   QG  + +P +     +Q N
Sbjct: 354  QDTEKQVPGDT--GDEEQYYSEDSEFVENTPASGKSEQGSSQQNPSQEPIPSQQPN 407


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
 Frame = -3

Query: 1122 ISRWSHQFDPTQDS-ALAPVWVEFYDLPYHLFNPGMLIPIASMIGKYLTIDQATLTMSTP 946
            +  WS +FDP +D     P+WV   ++P  L++  +L+ IA  +GK + +D  TL +   
Sbjct: 122  VQAWSPEFDPLRDEITTTPIWVRLMNIPLSLYHTSILMGIAGSLGKPVKVDMTTLHVERA 181

Query: 945  LVARICVEVDLSKPLPAKLKITDPIYMDFWQEVVYDRLPRYCTYCSLQGHNASDC 781
              AR+C+EVDL+KPL   L +    Y      V Y+ L   C+ C + GH    C
Sbjct: 182  RFARMCIEVDLAKPLKGTLLLNGERYF-----VSYEGLANICSRCGMYGHLIHTC 231


>ref|NP_178215.1| zinc ion binding / nucleic acid binding [Arabidopsis thaliana]
            gi|6598620|gb|AAF18653.1| hypothetical protein
            [Arabidopsis thaliana] gi|330250297|gb|AEC05391.1| zinc
            ion binding / nucleic acid binding protein [Arabidopsis
            thaliana]
          Length = 515

 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
 Frame = -3

Query: 1122 ISRWSHQFDPTQDSALA-PVWVEFYDLPYHLFNPGMLIPIASMIGKYLTIDQATLTMSTP 946
            +  WS +FDP +D  +  PVWV   ++PY+ ++  +L+ IA  +G+ L +D  T+     
Sbjct: 147  VQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKG 206

Query: 945  LVARICVEVDLSKPLPAKLKITDPIYMDFWQEVVYDRLPRYCTYCSLQGHNASDC 781
              AR+C+EV+L+KPL   + I    Y      V Y+ L + C+ C + GH    C
Sbjct: 207  RFARVCIEVNLAKPLKGTVLINGDRYF-----VAYEGLSKICSSCGIYGHLVHSC 256


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
            gi|7268308|emb|CAB78602.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 655

 Score = 77.0 bits (188), Expect = 8e-12
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = -3

Query: 1122 ISRWSHQFDPTQDSA-LAPVWVEFYDLPYHLFNPGMLIPIASMIGKYLTIDQATLTMSTP 946
            +  WS +F+P +D     PVWV   +LP   ++  +L+ IA+ +GK + +D  TL     
Sbjct: 162  VQAWSPEFNPLRDVIETTPVWVRVANLPVTFYHNEILLGIAAGLGKPIKVDLTTLRKERG 221

Query: 945  LVARICVEVDLSKPLPAKLKITDPIYMDFWQEVVYDRLPRYCTYCSLQGHNASDCRKLNP 766
              AR+CVEV+L  PL   L +    Y      V Y+ L   C+ C + GH  ++C    P
Sbjct: 222  RFARVCVEVNLKNPLKGTLVVNGERYF-----VSYEGLQTICSLCGIYGHTVNNC----P 272

Query: 765  NGSTTRG 745
             G TT+G
Sbjct: 273  MGRTTQG 279


>dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 591

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = -3

Query: 1122 ISRWSHQFDPTQDSALA-PVWVEFYDLPYHLFNPGMLIPIASMIGKYLTIDQATLTMSTP 946
            +  WS +F+P +D  +  P+WV   D+P   ++  +L+ +A  +G+ L +D   L     
Sbjct: 147  VKAWSPEFNPLKDEIVTTPIWVRIADMPVSFYHKSILMSVAQGLGRPLKVDLTMLHFERG 206

Query: 945  LVARICVEVDLSKPLPAKLKITDPIYMDFWQEVVYDRLPRYCTYCSLQGHNASDCRK 775
              AR+CVEVDL +PL   L +    Y      V Y+ L   C+ C + GH   +C K
Sbjct: 207  RFARVCVEVDLKRPLQGALLVNGDRYY-----VAYEGLTNICSKCGIYGHLVHNCPK 258