BLASTX nr result

ID: Coptis21_contig00016825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016825
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space...   156   4e-36
ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|1...   154   1e-35
ref|XP_002513150.1| Intermembrane space import and assembly prot...   144   2e-32
ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space...   143   4e-32
ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space...   140   4e-31

>ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40 [Vitis vinifera] gi|147853097|emb|CAN78563.1|
           hypothetical protein VITISV_010402 [Vitis vinifera]
           gi|297742718|emb|CBI35352.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  156 bits (395), Expect = 4e-36
 Identities = 85/148 (57%), Positives = 99/148 (66%), Gaps = 3/148 (2%)
 Frame = +1

Query: 145 MGQVQSDNPSAEADQTVKAESSKAQQPHSMEALIAEATAFGDSETESLDAKIEKALECPC 324
           MGQV+S+  SA         +S+++   S++ALIAEA AFGD E ESLDAK +KALECPC
Sbjct: 1   MGQVESNQSSAP-------NNSQSRPSDSLDALIAEAAAFGDDENESLDAKAQKALECPC 53

Query: 325 VAPLRSGPCGTPFIDAFRCFLKSTAEEKGSDCVHPFVALQNCIKLNPDAF-XXXXXXXXX 501
           +A LRSGPCGT F +AF CFLKS+AEEKGSDCVHPFVALQNCIK NP+AF          
Sbjct: 54  IAHLRSGPCGTQFSEAFVCFLKSSAEEKGSDCVHPFVALQNCIKANPNAFSKDILDDDDE 113

Query: 502 XXXXXXXXXXYKISPPRWSTE--PKAKL 579
                     YKI PP W+ E  PK KL
Sbjct: 114 VKKEEEPTQEYKIIPPIWAAEKGPKQKL 141


>ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|118481972|gb|ABK92917.1|
           unknown [Populus trichocarpa]
           gi|222865469|gb|EEF02600.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  154 bits (390), Expect = 1e-35
 Identities = 84/149 (56%), Positives = 98/149 (65%), Gaps = 4/149 (2%)
 Frame = +1

Query: 145 MGQVQSD-NPSAEADQTVKAESSKAQQPHSMEALIAEATAFGDSETESLDAKIEKALECP 321
           MGQ QS+  PS  ADQ     SS      SME+L+AEA A+G+ E ESL+AK +KALECP
Sbjct: 1   MGQAQSEVAPSDTADQMEPHFSSSP----SMESLLAEAVAYGNDENESLEAKAQKALECP 56

Query: 322 CVAPLRSGPCGTPFIDAFRCFLKSTAEEKGSDCVHPFVALQNCIKLNPDAFXXXXXXXXX 501
           C+A LR+GPCG  F ++F CFLKST+EEKGSDCVHPFVALQNCIK NP+AF         
Sbjct: 57  CIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFSKDILEEAE 116

Query: 502 XXXXXXXXXXYKISPPRWSTE---PKAKL 579
                     YKI PP WS E   PK+KL
Sbjct: 117 EKKEEEPAQEYKIIPPIWSRESQSPKSKL 145


>ref|XP_002513150.1| Intermembrane space import and assembly protein 40, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223548161|gb|EEF49653.1| Intermembrane space import
           and assembly protein 40, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 135

 Score =  144 bits (363), Expect = 2e-32
 Identities = 78/138 (56%), Positives = 91/138 (65%)
 Frame = +1

Query: 145 MGQVQSDNPSAEADQTVKAESSKAQQPHSMEALIAEATAFGDSETESLDAKIEKALECPC 324
           MGQ QS+   A  DQT   +SS A    S+E+LIAEA A+G+ E ESLDAK +KALECPC
Sbjct: 1   MGQAQSE--VAAVDQTQNHQSSPAT---SVESLIAEAAAYGNDENESLDAKAQKALECPC 55

Query: 325 VAPLRSGPCGTPFIDAFRCFLKSTAEEKGSDCVHPFVALQNCIKLNPDAFXXXXXXXXXX 504
           +A LR G CG  F +AF CFLKSTAEEKGSDCVHPFVALQ+C+K NP+AF          
Sbjct: 56  IADLRKGSCGIQFSEAFVCFLKSTAEEKGSDCVHPFVALQDCLKANPEAF-SNDILEQEV 114

Query: 505 XXXXXXXXXYKISPPRWS 558
                    YK+ PP WS
Sbjct: 115 EKEEVEAKDYKMFPPAWS 132


>ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  143 bits (360), Expect = 4e-32
 Identities = 75/153 (49%), Positives = 91/153 (59%), Gaps = 11/153 (7%)
 Frame = +1

Query: 145 MGQVQSD---NPSAEADQTVKAESSKAQQPHSMEALIAEATAFGDSETESLDAKIEKALE 315
           MGQ +S    +P  +   ++   +S    P SME+LIAEA A+G+   ESLDAK  +ALE
Sbjct: 1   MGQAESVAAVSPPNDLPPSLNQSASPVSGPPSMESLIAEAEAYGNETNESLDAKANRALE 60

Query: 316 CPCVAPLRSGPCGTPFIDAFRCFLKSTAEEKGSDCVHPFVALQNCIKLNPDAF------- 474
           CPC+A LR GPCG  F DAF CF KSTAEEKGSDCVHPFVALQ+CIK NP+AF       
Sbjct: 61  CPCIADLRKGPCGIQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDE 120

Query: 475 -XXXXXXXXXXXXXXXXXXXYKISPPRWSTEPK 570
                               Y++ PP WS EP+
Sbjct: 121 DEEEKEMEKEKVKTEEPTQDYRVIPPSWSREPQ 153


>ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  140 bits (352), Expect = 4e-31
 Identities = 74/153 (48%), Positives = 90/153 (58%), Gaps = 11/153 (7%)
 Frame = +1

Query: 145 MGQVQSD---NPSAEADQTVKAESSKAQQPHSMEALIAEATAFGDSETESLDAKIEKALE 315
           MGQ +S    +P  +   ++   +S    P SME+LIAEA A+G+   ESLDAK  +ALE
Sbjct: 1   MGQAESVAAVSPPNDLPPSLNQSASPVSGPPSMESLIAEAEAYGNETNESLDAKANRALE 60

Query: 316 CPCVAPLRSGPCGTPFIDAFRCFLKSTAEEKGSDCVHPFVALQNCIKLNPDAF------- 474
           CPC+A LR G CG  F DAF CF KSTAEEKGSDCVHPFVALQ+CIK NP+AF       
Sbjct: 61  CPCIADLRKGSCGIQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDE 120

Query: 475 -XXXXXXXXXXXXXXXXXXXYKISPPRWSTEPK 570
                               Y++ PP WS EP+
Sbjct: 121 DEEEKEMEKEKVKTEEPTQDYRVVPPSWSREPQ 153


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