BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016798
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [S...    82   6e-14
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
emb|CBI15077.3| unnamed protein product [Vitis vinifera]               81   8e-14

>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
           protein product [Vitis vinifera]
          Length = 595

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
 Frame = -3

Query: 287 PNET-STFTWNSLLSVVPTEGMLISVLSSSGYLCVLEVGKWVHDYVKCNGILLAASIGTA 111
           PNE  S F      ++ PT+  ++SVLSS   L  L++GKW+H+YVK NG      + TA
Sbjct: 203 PNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTA 262

Query: 110 LLSMYAKCGCIGDAICVLMEMPRRDALSWTAMISA 6
           L+ MYAKCG + DA+CV   M  RD  +W+AMI A
Sbjct: 263 LIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMA 297


>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/78 (47%), Positives = 52/78 (66%)
 Frame = -3

Query: 239 PTEGMLISVLSSSGYLCVLEVGKWVHDYVKCNGILLAASIGTALLSMYAKCGCIGDAICV 60
           PT+  ++  LSS   L  L++G+W+H+YVK NG      + TAL+ MYAKCG + DA+ V
Sbjct: 234 PTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSV 293

Query: 59  LMEMPRRDALSWTAMISA 6
             +MPRRD  +W+AMI A
Sbjct: 294 FKDMPRRDTQAWSAMIVA 311


>ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
           gi|241918518|gb|EER91662.1| hypothetical protein
           SORBIDRAFT_01g023020 [Sorghum bicolor]
          Length = 650

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 22/115 (19%)
 Frame = -3

Query: 281 ETSTFTWNSLLS----------------------VVPTEGMLISVLSSSGYLCVLEVGKW 168
           E   F WN+L++                      V P E  ++++LS+   L  LE+G W
Sbjct: 318 ERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMW 377

Query: 167 VHDYVKCNGILLAASIGTALLSMYAKCGCIGDAICVLMEMPRRDALSWTAMISAL 3
           VH Y+  + + L+ ++GT+L+ MYAKCG I  AIC+  E+P ++AL+WTAMI  L
Sbjct: 378 VHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGL 432


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/81 (49%), Positives = 56/81 (69%)
 Frame = -3

Query: 245 VVPTEGMLISVLSSSGYLCVLEVGKWVHDYVKCNGILLAASIGTALLSMYAKCGCIGDAI 66
           V P E +L+S+LS+  +L  L+ GKW+H Y+  N ILL+++I TAL+ MYAKCG I  A 
Sbjct: 286 VKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCAR 345

Query: 65  CVLMEMPRRDALSWTAMISAL 3
            V   + +RD L+WT+MIS L
Sbjct: 346 RVFDGLHKRDLLTWTSMISGL 366


>emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/81 (49%), Positives = 56/81 (69%)
 Frame = -3

Query: 245 VVPTEGMLISVLSSSGYLCVLEVGKWVHDYVKCNGILLAASIGTALLSMYAKCGCIGDAI 66
           V P E +L+S+LS+  +L  L+ GKW+H Y+  N ILL+++I TAL+ MYAKCG I  A 
Sbjct: 256 VKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCAR 315

Query: 65  CVLMEMPRRDALSWTAMISAL 3
            V   + +RD L+WT+MIS L
Sbjct: 316 RVFDGLHKRDLLTWTSMISGL 336



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
 Frame = -3

Query: 272 TFTWNSLLS--VVPTEGMLISVLSSSGYLCVLEVGKWVHDYVKCNGILLAASIGTALLSM 99
           TF  N L    V P E +L+ VLS+  +L  L+ G W+H Y+   GI  +++I TAL+ M
Sbjct: 448 TFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDM 507

Query: 98  YAKCGCIGDAICVLMEMPRRDALSWTAMISAL 3
           YAKCG I  A  V   + +RD LS+T+MIS L
Sbjct: 508 YAKCGRIDCASRVFNGICKRDVLSFTSMISGL 539