BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016797
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]   115   5e-24
ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group] g...   108   3e-22
ref|XP_002511318.1| pentatricopeptide repeat-containing protein,...   108   6e-22
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
           [Vitis vinifera] gi|296089231|emb|CBI39003.3| unnamed
           protein product [Vitis vinifera]
          Length = 601

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/126 (40%), Positives = 77/126 (61%)
 Frame = +2

Query: 2   DEARCVFNKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRCENVVPTEGMLIXXXXXX 181
           D+A  VFN+MP RN VSW A+++GY QC R+ EAL +F E   E + P +  +       
Sbjct: 257 DDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTAC 316

Query: 182 XXXXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSWA 361
                    +W+H+YV  + + L + +GTAL+ MY+KCGC+D+A+ VF ++P +D   W 
Sbjct: 317 AQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWT 376

Query: 362 AMISAL 379
           AMI+ L
Sbjct: 377 AMINGL 382



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2   DEARCVFNKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRCENVVPTEGMLIXXXXXX 181
           D +R +F +  +++ VSW A+++G  + GR  EAL  F E R   V   E  ++      
Sbjct: 155 DCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAA 214

Query: 182 XXXXXXXXXKWVHD-YVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSW 358
                    +WVH  YV+   ++    +G+AL+ MY+KCG  DDA+ VF EMP R+ +SW
Sbjct: 215 AMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSW 274

Query: 359 AAMIS 373
            A+I+
Sbjct: 275 GALIA 279


>emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
          Length = 601

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/126 (40%), Positives = 77/126 (61%)
 Frame = +2

Query: 2   DEARCVFNKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRCENVVPTEGMLIXXXXXX 181
           D+A  VFN+MP RN VSW A+++GY QC R+ EAL +F E   E + P +  +       
Sbjct: 257 DDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTAC 316

Query: 182 XXXXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSWA 361
                    +W+H+YV  + + L + +GTAL+ MY+KCGC+D+A+ VF ++P +D   W 
Sbjct: 317 AQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWT 376

Query: 362 AMISAL 379
           AMI+ L
Sbjct: 377 AMINGL 382



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2   DEARCVFNKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRCENVVPTEGMLIXXXXXX 181
           D +R +F +  +++ VSW A+++G  + GR  EAL  F E R   V   E  ++      
Sbjct: 155 DCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAA 214

Query: 182 XXXXXXXXXKWVHD-YVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSW 358
                    +WVH  YV+   ++    +G+AL+ MY+KCG  DDA+ VF EMP R+ +SW
Sbjct: 215 AMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSW 274

Query: 359 AAMIS 373
            A+I+
Sbjct: 275 GALIA 279


>ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
           gi|13940614|gb|AAK50416.1|AC021891_17 Putative
           selenium-binding protein-like [Oryza sativa Japonica
           Group] gi|31431939|gb|AAP53645.1| pentatricopeptide,
           putative [Oryza sativa Japonica Group]
           gi|125574711|gb|EAZ15995.1| hypothetical protein
           OsJ_31439 [Oryza sativa Japonica Group]
           gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa
           Japonica Group]
          Length = 651

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/126 (41%), Positives = 81/126 (64%)
 Frame = +2

Query: 2   DEARCVFNKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRCENVVPTEGMLIXXXXXX 181
           D+AR VF++MPER+   W A+++GY QC +  EALSLF+E +  +VVP E  ++      
Sbjct: 311 DDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTAC 370

Query: 182 XXXXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSWA 361
                     WVH Y++ + ++ + ++GT+L+ MYAKCG I+ AI +F E+P ++AL+W 
Sbjct: 371 SQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWT 430

Query: 362 AMISAL 379
           AMI  L
Sbjct: 431 AMICGL 436



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
 Frame = +2

Query: 2   DEARCVFNKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRCENVV--PTEGMLIXXXX 175
           ++AR +F++ P R+ VSW  ++ GY + G   EAL LF     E+ V  P E  +I    
Sbjct: 177 EDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVS 236

Query: 176 XXXXXXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALS 355
                      + +H +V  +G+  T  +  AL+ MY KCG ++ A  VF  +  R  +S
Sbjct: 237 GCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVS 296

Query: 356 WAAMI 370
           W  MI
Sbjct: 297 WTTMI 301


>ref|XP_002511318.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550433|gb|EEF51920.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/126 (41%), Positives = 76/126 (60%)
 Frame = +2

Query: 2   DEARCVFNKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRCENVVPTEGMLIXXXXXX 181
           D+AR +F++M  R+ V+W+A++SGYSQ  R  EA+ LFNE +  N+ P E  ++      
Sbjct: 279 DKARRLFDQMDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQMANLDPNEVTMVSVLSCC 338

Query: 182 XXXXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSWA 361
                    KW+H Y+K  G+ LT ++GTAL+  Y KCG +D AI VF  MP ++  SW 
Sbjct: 339 AALGALGTGKWIHLYIKRKGMNLTVTLGTALVDFYGKCGLVDSAIEVFQLMPVKNVYSWT 398

Query: 362 AMISAL 379
           A+I  L
Sbjct: 399 ALIQGL 404



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/122 (35%), Positives = 68/122 (55%)
 Frame = +2

Query: 8   ARCVFNKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRCENVVPTEGMLIXXXXXXXX 187
           AR +F+ M ER+  +W ++ SGY + G +++ + LF E R   V   +  LI        
Sbjct: 180 ARNMFDGMSERDIFAWNSMFSGYVKSGYYEDTVRLFEEMRELGVGFNDITLISVLAACGR 239

Query: 188 XXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSWAAM 367
                  +W+  YV+ NG+    ++ TAL+ MYAKCG +D A  +F +M  RD ++W+AM
Sbjct: 240 LADVELGEWIAKYVRVNGLDRNMNLVTALVDMYAKCGEVDKARRLFDQMDGRDVVAWSAM 299

Query: 368 IS 373
           IS
Sbjct: 300 IS 301


>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/124 (41%), Positives = 76/124 (61%)
 Frame = +2

Query: 8   ARCVFNKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRCENVVPTEGMLIXXXXXXXX 187
           AR +F++MPE+NAVSW+A+++GY+Q G   EAL LFN+ +     P  G ++        
Sbjct: 198 ARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAF 257

Query: 188 XXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSWAAM 367
                  +W+H YV  N ++L   +GTAL+ MYAKCGC++ A  VF EM  RD  ++ ++
Sbjct: 258 LGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSL 317

Query: 368 ISAL 379
           IS L
Sbjct: 318 ISGL 321