BLASTX nr result
ID: Coptis21_contig00016773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00016773
(1473 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520213.1| conserved hypothetical protein [Ricinus comm... 284 5e-74
ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|1... 281 4e-73
gb|AFK35642.1| unknown [Lotus japonicus] 259 1e-66
ref|XP_003613372.1| SAM domain family protein [Medicago truncatu... 255 2e-65
ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|2... 252 2e-64
>ref|XP_002520213.1| conserved hypothetical protein [Ricinus communis]
gi|223540705|gb|EEF42268.1| conserved hypothetical
protein [Ricinus communis]
Length = 334
Score = 284 bits (726), Expect = 5e-74
Identities = 177/348 (50%), Positives = 222/348 (63%), Gaps = 15/348 (4%)
Frame = -2
Query: 1370 SSKPQVTITLGRSGQVVKRKDNSSSECVPTSSSGTKRSIRDRLGHNNNDNYN----QPXX 1203
+SK +VTITLGR+GQVVKR S +G+KRS+RDRLG N + + + QP
Sbjct: 4 ASKGRVTITLGRTGQVVKRAAVVSDV---QYGAGSKRSVRDRLGTNFDSSSSRGGAQPNN 60
Query: 1202 XXXXXXXXXXSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSDDGHKQKNIDLREKLSRT 1023
SL+ +GVD VR++++DLR KLM+KN SR+ S+ ++Q +DLREKLSRT
Sbjct: 61 KRQRGESYLTSLSSNGVDDVRIDKDDLRLKLMQKNASRRAPSN--YEQSTMDLREKLSRT 118
Query: 1022 NQPPLRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNSYSNWT 843
PP P DTRQ M PK +L RIP TRSADDL +MDS RNSYS WT
Sbjct: 119 VHPP--------GPSLRIVDTRQHMPAPKEASILGRIPSTRSADDLPRMDSSRNSYSPWT 170
Query: 842 LGTLRPGSPDRLVGTSRGLSPPRIMDN--RRPVRHVSSITHDASRPTPFIGKDIYDASRP 669
L +R SPDR++G+SR LSPPR ++ RRP+ S T D +R ++ KD+ D RP
Sbjct: 171 LDHIRRRSPDRIIGSSRALSPPRNVEEIQRRPL----SRTLDDARAVSYMSKDVLDGRRP 226
Query: 668 -----STFMPTISVPLEAAKPVV----RLPPPTAPGITQKISYMGEEPVTVSGLLHSLGL 516
+ FM +P + KP ++PPP GI QK SY EEP TV LLHSLGL
Sbjct: 227 VGSSTTAFMAKPVLPTVSTKPAAPILGQIPPPC--GILQKASYAVEEPQTVESLLHSLGL 284
Query: 515 GKYAIIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSKR 372
GKYAI+F+AEEVDMTALKQM + DLKELGIPMGPRKKILL++ R+KR
Sbjct: 285 GKYAILFKAEEVDMTALKQMRESDLKELGIPMGPRKKILLALLPRTKR 332
>ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|118487432|gb|ABK95544.1|
unknown [Populus trichocarpa] gi|222851683|gb|EEE89230.1|
predicted protein [Populus trichocarpa]
Length = 330
Score = 281 bits (718), Expect = 4e-73
Identities = 177/349 (50%), Positives = 221/349 (63%), Gaps = 17/349 (4%)
Frame = -2
Query: 1370 SSKPQVTITLGRSGQVVKRKDNSSSECVPTSS-SGTKRSIRDRLGHNNNDNYNQPXXXXX 1194
+SK +VTITLGRSGQVVKR S + + +G+KRS+ DRLGH ++ +
Sbjct: 4 TSKARVTITLGRSGQVVKRAATISDDYSNSQQGAGSKRSVMDRLGHQLSNKRQR------ 57
Query: 1193 XXXXXXXSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSDDGHKQKNIDLREKLSRTNQP 1014
SL +GV R++++DLR+KLM+KN R+ SDD QK +DLREKLSRT QP
Sbjct: 58 -GDSSLTSLGSNGVKDGRIDKDDLRYKLMQKNVFRRAQSDDD--QKTMDLREKLSRTVQP 114
Query: 1013 ---PLRT--DTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNSYSN 849
PL T D RQRMPEP TDT +L RIPPTRSADDL M S RNS+S+
Sbjct: 115 SGHPLSTNLDARQRMPEP--TDT----------SILGRIPPTRSADDLHHMYSSRNSFSS 162
Query: 848 WTLGTLRPGSPDRLVGTSRGLSPPRIMDN--RRPVRHVSSITHDASRPTPFIGKDIYDAS 675
WTL +R SPDR++ +SRGLSPPR +DN RRP+ T+D R ++ KD+ D
Sbjct: 163 WTLDHIRRRSPDRVISSSRGLSPPRNVDNLQRRPLNR----TYDDFRTVSYMNKDVLDTP 218
Query: 674 RP----STFMPTISVPLEAAKPVVRLPP-----PTAPGITQKISYMGEEPVTVSGLLHSL 522
R STFM ++P + P + P P + G+ K SY EE TV GLLHSL
Sbjct: 219 RSVSSSSTFMTKSAMPPPSTVPATSVAPRMSQLPPSSGLVHKSSYAAEEQQTVEGLLHSL 278
Query: 521 GLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSK 375
GLGKYAI+F+AEE+DM ALKQMG+ DLKELGIPMGPRKKILL++ RSK
Sbjct: 279 GLGKYAILFKAEEIDMPALKQMGESDLKELGIPMGPRKKILLALLPRSK 327
>gb|AFK35642.1| unknown [Lotus japonicus]
Length = 338
Score = 259 bits (662), Expect = 1e-66
Identities = 157/353 (44%), Positives = 223/353 (63%), Gaps = 18/353 (5%)
Frame = -2
Query: 1370 SSKPQVTITLGRSGQVVKRKDNSSSECVPTS--SSGTKRSIRDRLGHNNNDNYNQPXXXX 1197
+S+ +VTITLGRSGQVVKR + + +S S+G+KRS+RDR+G N + +
Sbjct: 4 TSRGRVTITLGRSGQVVKRDVSGADVAFSSSVSSAGSKRSVRDRIGSNADSSMWHGNGLA 63
Query: 1196 XXXXXXXXSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSDDGHKQKNIDLREKLSRTNQ 1017
+ +G+D R+ ++DLR KL++K+ SR+ S+D K+++ DLREKLS+ Q
Sbjct: 64 SNKRQRGDMSSRNGLDDGRIGKDDLRLKLIQKSASRQAESND--KKRHGDLREKLSKAVQ 121
Query: 1016 PPLRT-DTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNSYSNWTL 840
PP + +++ RMPEP + LLR++PP RS+DDL++M+SMR+SYS WTL
Sbjct: 122 PPRDSFNSKPRMPEP------------RERSLLRQLPPARSSDDLMRMESMRSSYSPWTL 169
Query: 839 GTLRPGSPDRLVGTSRGLSPPRIMDN--RRPVRHVSSITHDASRPTPFIGKDIYDASRPS 666
+R SPD TSRG+SP R + RRP+ T+D++R P++G+D+ + SRP
Sbjct: 170 DHIRQRSPDGFPSTSRGISPQRNAGDLQRRPLNR----TYDSARSVPYVGRDVLETSRPP 225
Query: 665 TFMPTI--------SVPLEAAKPVVRLPP--PTAPGITQKISYMGEE---PVTVSGLLHS 525
+ P ++P AK V P P + + + SY G+E TV GLLH+
Sbjct: 226 STAPASFMSRSTMSTLPPVTAKSVASHPGQLPPSSSVAPRASYAGDEHQSQQTVDGLLHA 285
Query: 524 LGLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSKR*H 366
LGLGKY I+F+AEEVDMTALKQMG++DLKELGIPMGPRKKILL++ R+KR H
Sbjct: 286 LGLGKYVILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALMPRTKRPH 338
>ref|XP_003613372.1| SAM domain family protein [Medicago truncatula]
gi|355514707|gb|AES96330.1| SAM domain family protein
[Medicago truncatula]
Length = 336
Score = 255 bits (652), Expect = 2e-65
Identities = 154/349 (44%), Positives = 217/349 (62%), Gaps = 17/349 (4%)
Frame = -2
Query: 1370 SSKPQVTITLGRSGQVVKRKDNSSSECVPTSSS----GTKRSIRDRLGHNNNDNYNQPXX 1203
SS+ ++TITLGRSGQVVKR + ++ VP SSS GTKRS+RDR+G++ + +
Sbjct: 4 SSRGRITITLGRSGQVVKR--DVTAVDVPYSSSMSSAGTKRSVRDRIGYSGDSSMRHGNG 61
Query: 1202 XXXXXXXXXXSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSDDGHKQKNIDLREKLSRT 1023
+ +G D R+ ++DLR KLMRK+ SR+ S+D ++ N+DLREKL +T
Sbjct: 62 VSGNKRQRGDASMRNGPDDGRIGKDDLRLKLMRKSASRRDESNDNNR--NVDLREKLKKT 119
Query: 1022 NQPPLRT-DTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNSYSNW 846
PP + +++Q MPEP REP L R +P RS+DD+++M+SMRNSYS W
Sbjct: 120 AHPPTNSFNSKQHMPEP---------REPS---LFRPVPSARSSDDIMRMESMRNSYSPW 167
Query: 845 TLGTLRPGSPDRLVGTSRGLSPPRIMDNRRPVRHVSSITHDASRPTPFIGKDIYDASRPS 666
TL +R SP+ TSRG+SP R + P R + T+D RP + G+D+ + SRP
Sbjct: 168 TLDQIRQRSPEEYPSTSRGISPQRNAGD--PQRRPLNRTYDGVRPVQYAGRDVLETSRPP 225
Query: 665 TFMPTISVP---LEAAKPVVRLPPPTAPG-------ITQKISYMGEE--PVTVSGLLHSL 522
+ P+ +P + PV P P+ PG + Q+ ++G E P TV GLL +L
Sbjct: 226 SAAPSSFMPRSTMSTLPPVTAKPVPSHPGRLPPSGSVPQRPPFVGNEQQPQTVDGLLQAL 285
Query: 521 GLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSK 375
GL KY I+F+AEEVDMTAL+QMG++DLKELGIPMGPRKK+LL++ R +
Sbjct: 286 GLQKYQILFKAEEVDMTALRQMGENDLKELGIPMGPRKKLLLALLPRKR 334
>ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|222851612|gb|EEE89159.1|
predicted protein [Populus trichocarpa]
Length = 341
Score = 252 bits (643), Expect = 2e-64
Identities = 159/336 (47%), Positives = 208/336 (61%), Gaps = 19/336 (5%)
Frame = -2
Query: 1370 SSKPQVTITLGRSGQVVKRKDNSSSECVPTSS-SGTKRSIRDRLGHNNND---NYNQPXX 1203
+SK +VTITLGR GQVVKR S + + +G+KRS+ +RLG N++ + NQ
Sbjct: 4 TSKARVTITLGRGGQVVKRAATVSDDYSNSQQGAGSKRSVMERLGSNSDILSLHGNQLSN 63
Query: 1202 XXXXXXXXXXSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSDDGHKQKNIDLREKLSRT 1023
SL +GV+ R+ ++DLR+KLM+KN + SDD QK +DLREKLSRT
Sbjct: 64 KRQRGDNSLTSLGANGVEDARIGKDDLRYKLMQKNVFSRTQSDDD--QKTMDLREKLSRT 121
Query: 1022 NQPPLRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNSYSNWT 843
+ P P D R + +PK T +L RIPPTRSAD L MDS RNS+S WT
Sbjct: 122 VRSP--------GPLLSNLDARHCLPDPKDTSILGRIPPTRSADVLHHMDSSRNSFSPWT 173
Query: 842 LGTLRPGSPDRLVGTSRGLSPPRIMDN--RRPVRHVSSITHDASRPTPFIGKDIYDASRP 669
L +R SPDR++ +S GLSPPR MDN RRP+ T+DA R P++ KD+ D R
Sbjct: 174 LDHIRRRSPDRVMSSSGGLSPPRNMDNLQRRPLNR----TYDAVRTVPYMNKDVLDTPRS 229
Query: 668 ----STFM---------PTISVPLEAAKPVVRLPPPTAPGITQKISYMGEEPVTVSGLLH 528
+TF+ P+ +VP ++ P++ PP+ GI QK SY+ EE TV GLLH
Sbjct: 230 VSSSTTFITKSAMLPLSPSPTVPAKSVVPLMGHLPPS--GIVQKSSYVAEEQQTVEGLLH 287
Query: 527 SLGLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPM 420
SLGLGKY ++F+AEE+DMTALKQMG+ DLKELGIPM
Sbjct: 288 SLGLGKYVVLFKAEEIDMTALKQMGERDLKELGIPM 323