BLASTX nr result

ID: Coptis21_contig00016766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016766
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173938.1| PREDICTED: probable cyclic nucleotide-gated ...   132   4e-29
ref|XP_004136445.1| PREDICTED: probable cyclic nucleotide-gated ...   132   4e-29
ref|XP_002272241.1| PREDICTED: probable cyclic nucleotide-gated ...   127   9e-28
emb|CAN83465.1| hypothetical protein VITISV_038667 [Vitis vinifera]   127   9e-28
ref|XP_002515365.1| Cyclic nucleotide-gated ion channel, putativ...   127   1e-27

>ref|XP_004173938.1| PREDICTED: probable cyclic nucleotide-gated ion channel 14-like
           [Cucumis sativus]
          Length = 204

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = -2

Query: 279 SKKLQHTFRFYSHHWRTWAACFIQTAWRQLKRRKMAKYLSMQESFNYASDEHMAYETSQE 100
           SKKLQHTFRFYS+HWRTWAACFIQ AWR+ KRR +AK LS+QESF+   ++ +A E  QE
Sbjct: 85  SKKLQHTFRFYSYHWRTWAACFIQAAWRRFKRRIIAKSLSLQESFSLTPEKPVAEEAEQE 144

Query: 99  EEADGIPLANSSQKKQNLGVTIIASMFAANTRR 1
           EE    P ++ SQ KQNLGVTI+AS FAANTRR
Sbjct: 145 EEGHSTPRSSYSQAKQNLGVTILASRFAANTRR 177


>ref|XP_004136445.1| PREDICTED: probable cyclic nucleotide-gated ion channel 14-like
           [Cucumis sativus]
          Length = 705

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = -2

Query: 279 SKKLQHTFRFYSHHWRTWAACFIQTAWRQLKRRKMAKYLSMQESFNYASDEHMAYETSQE 100
           SKKLQHTFRFYS+HWRTWAACFIQ AWR+ KRR +AK LS+QESF+   ++ +A E  QE
Sbjct: 586 SKKLQHTFRFYSYHWRTWAACFIQAAWRRFKRRIIAKSLSLQESFSLTPEKPVAEEAEQE 645

Query: 99  EEADGIPLANSSQKKQNLGVTIIASMFAANTRR 1
           EE    P ++ SQ KQNLGVTI+AS FAANTRR
Sbjct: 646 EEGHSTPRSSYSQAKQNLGVTILASRFAANTRR 678


>ref|XP_002272241.1| PREDICTED: probable cyclic nucleotide-gated ion channel 14 [Vitis
           vinifera]
          Length = 726

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 3/96 (3%)
 Frame = -2

Query: 279 SKKLQHTFRFYSHHWRTWAACFIQTAWRQLKRRKMAKYLSMQESFNYASDEHMA---YET 109
           SKKLQHTFRFYSHHWRTWAACFIQ AWR+ K+R MAK LSM+ESF++A D+  A    ET
Sbjct: 604 SKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRIMAKNLSMRESFSFADDDDHADDEDET 663

Query: 108 SQEEEADGIPLANSSQKKQNLGVTIIASMFAANTRR 1
            QE+E      +NSSQ KQ+LGVTI+AS FA NTRR
Sbjct: 664 EQEDEGSSTK-SNSSQAKQHLGVTILASRFAKNTRR 698


>emb|CAN83465.1| hypothetical protein VITISV_038667 [Vitis vinifera]
          Length = 731

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 3/96 (3%)
 Frame = -2

Query: 279 SKKLQHTFRFYSHHWRTWAACFIQTAWRQLKRRKMAKYLSMQESFNYASDEHMA---YET 109
           SKKLQHTFRFYSHHWRTWAACFIQ AWR+ K+R MAK LSM+ESF++A D+  A    ET
Sbjct: 609 SKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRIMAKNLSMRESFSFADDDDHADDEDET 668

Query: 108 SQEEEADGIPLANSSQKKQNLGVTIIASMFAANTRR 1
            QE+E      +NSSQ KQ+LGVTI+AS FA NTRR
Sbjct: 669 EQEDEGSSTK-SNSSQAKQHLGVTILASRFAKNTRR 703


>ref|XP_002515365.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223545309|gb|EEF46814.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 629

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = -2

Query: 279 SKKLQHTFRFYSHHWRTWAACFIQTAWRQLKRRKMAKYLSMQESFNYASDEHMAYETSQE 100
           SKKLQHTFRFYS+HWRTW ACFIQ AWR+ K+R MA+ L+M ESF Y+ DE +A ET+QE
Sbjct: 512 SKKLQHTFRFYSYHWRTWGACFIQAAWRRHKKRMMARSLTMCESFAYSVDEQVASETTQE 571

Query: 99  EEADGIPLANSSQKKQNLGVTIIASMFAANTRR 1
           E    +  + SSQ KQNLGVTI+AS FAANTRR
Sbjct: 572 E---SMKSSTSSQAKQNLGVTILASRFAANTRR 601


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