BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016761
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX54788.2| putative arginine/serine-rich splicing factor [Ar...    85   7e-15
ref|XP_002515364.1| arginine/serine-rich splicing factor, putati...    85   7e-15
ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatul...    81   1e-13

>gb|ACX54788.2| putative arginine/serine-rich splicing factor [Arachis diogoi]
           gi|357018296|gb|AET50931.1| SR-protein [Arachis diogoi]
           gi|414005520|gb|AFW97328.1| SR protein [Arachis diogoi]
          Length = 181

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 47/93 (50%), Positives = 49/93 (52%)
 Frame = -3

Query: 526 DLKCYECGEPGHFARECRLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 347
           DLKCYECGEPGHFARECRLR                                        
Sbjct: 90  DLKCYECGEPGHFARECRLRGGSGRRRSRSPPRFRRSPSYGRRSYSPRGRSPRRRSLSPR 149

Query: 346 GHSYSRSPPYHRGREESPYANGNGVRDRHRSRS 248
           G SYSRSPPY RGREE PYANGNG+R+R RSRS
Sbjct: 150 GRSYSRSPPY-RGREELPYANGNGIRERRRSRS 181


>ref|XP_002515364.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223545308|gb|EEF46813.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 179

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 48/93 (51%), Positives = 49/93 (52%)
 Frame = -3

Query: 526 DLKCYECGEPGHFARECRLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 347
           DLKCYECGEPGHFARECRLRV                                       
Sbjct: 89  DLKCYECGEPGHFARECRLRVGSGRRRSRSPRYRRSPSYGRRSYSPRGRSPKRRSISPRG 148

Query: 346 GHSYSRSPPYHRGREESPYANGNGVRDRHRSRS 248
             SYSRSPPY RGREE PYANGNG+RDR RSRS
Sbjct: 149 -RSYSRSPPY-RGREELPYANGNGIRDRRRSRS 179


>ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatula]
           gi|355477697|gb|AES58900.1| RNA-binding protein Rsf1
           [Medicago truncatula]
          Length = 190

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/95 (48%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = -3

Query: 526 DLKCYECGEPGHFARECRLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 347
           DLKCYECGEPGHFARECR R                                        
Sbjct: 96  DLKCYECGEPGHFARECRNRGGGGAGRRRSRSPPRFRRSPSYGRRSYSPRGRSPRRRSVS 155

Query: 346 GH--SYSRSPPYHRGREESPYANGNGVRDRHRSRS 248
               SYSRSPP +RGREE PYANGNGVRDR RSRS
Sbjct: 156 PRGRSYSRSPPPYRGREEVPYANGNGVRDRRRSRS 190