BLASTX nr result

ID: Coptis21_contig00016746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016746
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527513.1| conserved hypothetical protein [Ricinus comm...    97   3e-18
ref|XP_003555294.1| PREDICTED: LOW QUALITY PROTEIN: probable bet...    91   2e-16
ref|XP_002527514.1| conserved hypothetical protein [Ricinus comm...    91   3e-16
ref|NP_001237385.1| uncharacterized protein LOC100306091 [Glycin...    84   3e-14
ref|XP_002300267.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-13

>ref|XP_002527513.1| conserved hypothetical protein [Ricinus communis]
           gi|223533153|gb|EEF34911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 197

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 48/87 (55%), Positives = 61/87 (70%)
 Frame = +3

Query: 192 MDGLIPFLFHAIKKHNGHRSYRSLSEGSTTARSYHQLIAYSGSLDGSSHRRTRSEFQPPT 371
           M+GLIP++ HAIKK   HR+Y+S SEGS+  RSYH LI    S++GSSHRRTRSEFQPP 
Sbjct: 1   MEGLIPYILHAIKKQRPHRTYKSFSEGSS--RSYHLLIGSGDSINGSSHRRTRSEFQPPA 58

Query: 372 FDFTEQRSGIELHSRSLKGANSISTPT 452
            +  EQRS +E    S     S+++PT
Sbjct: 59  MELLEQRSALEYVRSSSLRKRSVNSPT 85


>ref|XP_003555294.1| PREDICTED: LOW QUALITY PROTEIN: probable beta-D-xylosidase 5-like
            [Glycine max]
          Length = 901

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = +3

Query: 165  EKQTAELLIMDGLIPFLFHAIKKHNGHR-SYRSLSEGSTTARSYHQLIAYSGSLDGSSHR 341
            +K  +   IM+GLIP+L HAIKK   H  +YRS S   ++ RSYH L+A S S  GSSHR
Sbjct: 785  KKGRSSXSIMEGLIPYLIHAIKKQKPHHHNYRSYSHSESSNRSYHVLLA-SESFTGSSHR 843

Query: 342  RTRSEFQPPTFDFTEQRSGIELHSRSLKGANSISTPTKKPIGSSYPKKASHENNVSRFR 518
            RTRS+FQPPT +F EQR G++    S +G  + + P      +     A H NN++  R
Sbjct: 844  RTRSDFQPPTSEFLEQRYGVDGFLVSPRGQFTAAAPPP----TVNVNAAQHSNNITNMR 898


>ref|XP_002527514.1| conserved hypothetical protein [Ricinus communis]
           gi|223533154|gb|EEF34912.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 54/109 (49%), Positives = 71/109 (65%), Gaps = 6/109 (5%)
 Frame = +3

Query: 192 MDGLIPFLFHAIKKHNGHRSYRSLSEGSTTARSYHQLIAYSGSLDGSSHRRTRSEFQPPT 371
           M+GLIP+L HAI+K     SYRS S GS+  RSYH L+  + S  GSSHRRTRSEFQPPT
Sbjct: 1   MEGLIPYLLHAIRKQKPQNSYRSFSVGSS--RSYH-LLTGADSFSGSSHRRTRSEFQPPT 57

Query: 372 FDFTEQRSGIE-LHSRSLKGANSISTPTKKPIGS-----SYPKKASHEN 500
            +  +QR G+E L S SL+    +++P K   GS     SYP++ S ++
Sbjct: 58  MELLDQRQGLEYLRSGSLRNHRQVTSP-KAASGSKLGTTSYPQQMSGDH 105


>ref|NP_001237385.1| uncharacterized protein LOC100306091 [Glycine max]
           gi|255627517|gb|ACU14103.1| unknown [Glycine max]
          Length = 108

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = +3

Query: 192 MDGLIPFLFHAIKKHNGHR-SYRSLSEGSTTARSYHQLIAYSGSLDGSSHRRTRSEFQPP 368
           M+GLIP+L HAIKK   H  +YRS S   ++ RSYH L+A S S  GSSHRRT S+FQPP
Sbjct: 1   MEGLIPYLIHAIKKQKPHHHNYRSYSHSESSNRSYHMLLA-SESFTGSSHRRTGSDFQPP 59

Query: 369 TFDFTEQRSGIELHSRSLKGANSISTPTKKPIGSSYPKKASHENNVSRFR 518
           T +F EQR G++    S +        T  P  +     A   NN++  R
Sbjct: 60  TSEFLEQRYGVDGFLVSPRA----QVTTAAPPATVNVNAAQRSNNITNMR 105


>ref|XP_002300267.1| predicted protein [Populus trichocarpa] gi|222847525|gb|EEE85072.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
 Frame = +3

Query: 192 MDGLIPFLFHAIKKHNGHRSYRSLSEGSTTARSYHQLIAYSG-SLDGSSHRRTRSEFQPP 368
           M+GLIPFL H+IKK   H SYRSLS GS  +RSY  L+   G S++GSSHRRTRS++QPP
Sbjct: 1   MEGLIPFLLHSIKKQKPHNSYRSLSMGS--SRSYRLLMGGEGESVNGSSHRRTRSDYQPP 58

Query: 369 TFDFTEQRSGIE-LHSRSLKGANSISTP-TKKPIGSSYPKKASHE-NNVSRFR 518
             +  E R+ ++ L S SL+  +  S P T      +YP +   + NN +  R
Sbjct: 59  PMESLELRANLDFLRSGSLRKRSVNSPPMTGGSKFDAYPHQMGKQVNNKANIR 111


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