BLASTX nr result
ID: Coptis21_contig00016731
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00016731
(1408 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis... 225 2e-56
dbj|BAF75816.1| terminal flower 2 protein [Malus x domestica] gi... 219 1e-54
dbj|BAF75819.1| terminal flower 2 protein [Malus x domestica] 219 2e-54
dbj|BAF75817.1| terminal flower 2 protein [Malus x domestica] 218 3e-54
dbj|BAF75818.1| terminal flower 2 protein [Malus x domestica] 218 4e-54
>ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis vinifera]
gi|296090196|emb|CBI40015.3| unnamed protein product
[Vitis vinifera]
Length = 424
Score = 225 bits (574), Expect = 2e-56
Identities = 153/375 (40%), Positives = 199/375 (53%), Gaps = 6/375 (1%)
Frame = +2
Query: 2 RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFE------RTXXXXXXXXX 163
RR+R+RKG++QYLIKWRGWPE ANTWEP+ENL +C D+IDAFE R
Sbjct: 102 RRRRVRKGQLQYLIKWRGWPENANTWEPLENLQACSDVIDAFEDRLRSKRNRSSRKRKRK 161
Query: 164 XQGNSIPQPKKKQQRSVSTSPSAKVNYNKFTHLGFTSPHPTPRDGVEEGKSAESSGNVDR 343
G++ PKKKQQRS +++ H H + G+ D
Sbjct: 162 SGGSAQTLPKKKQQRSGASNVRG-------VHFRINDEHLL-------STHVNTLGHADI 207
Query: 344 ELSYGNVGPNNAGHVGKELCYSNRGPNYAGDVDKEMDYAHAGTTDHLAENGATHIYLEKS 523
E G V NN ++ KE + ENG+ + L+
Sbjct: 208 EGVNGAV--NNV------------------EMTKESN-----------ENGSGDVSLQIP 236
Query: 524 QSEEVNVADPHSSELNGVLTHRLDDGNFSIQVPDTRSLGKDGDADEQSKSGFPGNVQSSR 703
Q EE N +DP EL G ++ + F IQ + ++L D + SK QSSR
Sbjct: 237 QREEDNDSDPKLIELRG--SNEGNANKFKIQFQEVKALEGDCPMNGHSKVERVEMDQSSR 294
Query: 704 SIGAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPVGEDADSSGDNARDG 883
GA+RRKSGSVKRF D A + N QN + GS + ++P DS +N DG
Sbjct: 295 RTGARRRKSGSVKRFTKDLAPCEPNDIQNTATRIQIGSCGRVESPEFPGNDSGLNNKFDG 354
Query: 884 DRLEDAVDPSTIVKIIRPLSYSTSISNNVQDVSVTFQALRFDGRETVVDNKFLKANNPLM 1063
A++ S I +II+P+SYS SISN+ QDVSVTF A+R DG+E +VDNKFLKANNPL+
Sbjct: 355 -----AINMSAITEIIKPISYSASISNDAQDVSVTFMAMRSDGKEVMVDNKFLKANNPLL 409
Query: 1064 LINFYEQHVRYSPPT 1108
LINFYEQH+RYSP T
Sbjct: 410 LINFYEQHLRYSPTT 424
>dbj|BAF75816.1| terminal flower 2 protein [Malus x domestica]
gi|156104762|dbj|BAF75820.1| like heterochromatin protein
1 [Malus x domestica]
Length = 453
Score = 219 bits (559), Expect = 1e-54
Identities = 145/371 (39%), Positives = 201/371 (54%), Gaps = 4/371 (1%)
Frame = +2
Query: 2 RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFERTXXXXXXXXXX--QGN 175
RRKR+RKG++QYLIKWRGWPE ANTWEP++NL S D+++AFE + QG
Sbjct: 114 RRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKRKQGT 173
Query: 176 SIPQPKKKQQRSVSTSPSAKVNYNKF-THLGFTSPHPTPRDGVEEGKSAESSGNVDRELS 352
+ QPKK+QQRS T P YN +G D + S VD
Sbjct: 174 PLSQPKKRQQRS--TDPI----YNMTDVEIGIV-------DKALSSTALNCSKLVDLLPP 220
Query: 353 YGNVGPNNAGHVGKELCYSNRGPNYAGDVDKEMDYAHAGTTDHLAENGATHIYLEKSQSE 532
VG G G G+V+ TT AENG ++I + +
Sbjct: 221 QQPVGLARVGENG-------------GNVNNTET-----TTKVNAENGCSNISQQNGERR 262
Query: 533 EVNVADPHSSELNGV-LTHRLDDGNFSIQVPDTRSLGKDGDADEQSKSGFPGNVQSSRSI 709
E N DP SEL T+ ++ S+ + R+ +G AD SK VQS+R
Sbjct: 263 EENEYDPKLSELKATTFTNVVNLDKLSVPFQEGRAPEVNGPADGLSKVDCTETVQSNR-- 320
Query: 710 GAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPVGEDADSSGDNARDGDR 889
GAKRRKSGSVKRFK ++ ++L N + + G + E+ D +G N+ ++
Sbjct: 321 GAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNK 380
Query: 890 LEDAVDPSTIVKIIRPLSYSTSISNNVQDVSVTFQALRFDGRETVVDNKFLKANNPLMLI 1069
++++ + I KII+P+ YSTS+SN+VQDV VTF+A+R DG E +VDNK LK N+PL+LI
Sbjct: 381 IDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLI 440
Query: 1070 NFYEQHVRYSP 1102
+FYEQH+RY+P
Sbjct: 441 DFYEQHLRYNP 451
>dbj|BAF75819.1| terminal flower 2 protein [Malus x domestica]
Length = 456
Score = 219 bits (557), Expect = 2e-54
Identities = 140/387 (36%), Positives = 200/387 (51%), Gaps = 20/387 (5%)
Frame = +2
Query: 2 RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFERTXXXXXXXXXX--QGN 175
RRKR+RKG++QYLIKWRGWPE ANTWEP++NL S D+++AFE + QG
Sbjct: 113 RRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKRKQGT 172
Query: 176 SIPQPKKKQQRSVSTSP-----------------SAKVNYNKFTHLGFTSPHPTPRDGVE 304
+ QPKK+QQRS P S +N +K L P P+ V
Sbjct: 173 PLSQPKKRQQRSSDPIPIYNMTDVEIGIVDKALSSTALNCSKLVGL------PPPQQPVV 226
Query: 305 EGKSAESSGNVDRELSYGNVGPNNAGHVGKELCYSNRGPNYAGDVDKEMDYAHAGTTDHL 484
+ E+ G+ NN + K+++
Sbjct: 227 LARDGENDGHA-----------NNI------------------EATKKVN---------- 247
Query: 485 AENGATHIYLEKSQSEEVNVADPHSSELNGV-LTHRLDDGNFSIQVPDTRSLGKDGDADE 661
AENG ++ + E N DP SEL T+ ++ S+ + R+ +G D
Sbjct: 248 AENGCSNTSQQNGGRREENEDDPKLSELRATTFTNVVNWDKVSVPFQEARAPEVNGPTDG 307
Query: 662 QSKSGFPGNVQSSRSIGAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPV 841
SK VQS+RS GAKRRKS SVKRFK +S ++L N + + G +
Sbjct: 308 LSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSG 367
Query: 842 GEDADSSGDNARDGDRLEDAVDPSTIVKIIRPLSYSTSISNNVQDVSVTFQALRFDGRET 1021
E+ D +G N+ ++++++ + I KII+P+ YSTS+SN+VQDV VTF+A+R DG E
Sbjct: 368 AENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEV 427
Query: 1022 VVDNKFLKANNPLMLINFYEQHVRYSP 1102
+VDNK LK N+PL+LI+FYEQH+RY+P
Sbjct: 428 IVDNKSLKVNHPLLLIDFYEQHLRYNP 454
>dbj|BAF75817.1| terminal flower 2 protein [Malus x domestica]
Length = 453
Score = 218 bits (555), Expect = 3e-54
Identities = 144/371 (38%), Positives = 200/371 (53%), Gaps = 4/371 (1%)
Frame = +2
Query: 2 RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFERTXXXXXXXXXX--QGN 175
RRKR+RKG++QYLIKWRGWPE ANTWEP++NL S D+++AFE + QG
Sbjct: 114 RRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKRKQGT 173
Query: 176 SIPQPKKKQQRSVSTSPSAKVNYNKF-THLGFTSPHPTPRDGVEEGKSAESSGNVDRELS 352
+ QPKK+QQRS T P YN +G D + S VD
Sbjct: 174 PLSQPKKRQQRS--TDPI----YNMTDVEIGIV-------DKALSSTALNCSKLVDLLPP 220
Query: 353 YGNVGPNNAGHVGKELCYSNRGPNYAGDVDKEMDYAHAGTTDHLAENGATHIYLEKSQSE 532
VG G G G+V+ TT AENG ++I + +
Sbjct: 221 QQPVGLARVGENG-------------GNVNNTET-----TTKVNAENGCSNISQQNGERR 262
Query: 533 EVNVADPHSSELNGV-LTHRLDDGNFSIQVPDTRSLGKDGDADEQSKSGFPGNVQSSRSI 709
E N DP SEL T+ ++ S+ + R+ +G D SK VQS+R
Sbjct: 263 EENEYDPKLSELKATTFTNVVNLDKLSVPFQEGRAPEVNGPTDGLSKIDCTETVQSNR-- 320
Query: 710 GAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPVGEDADSSGDNARDGDR 889
GAKRRKSGSVKRFK ++ ++L N + + G + E+ D +G N+ ++
Sbjct: 321 GAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNK 380
Query: 890 LEDAVDPSTIVKIIRPLSYSTSISNNVQDVSVTFQALRFDGRETVVDNKFLKANNPLMLI 1069
++++ + I KII+P+ YSTS+SN+VQDV VTF+A+R DG E +VDNK LK N+PL+LI
Sbjct: 381 IDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLI 440
Query: 1070 NFYEQHVRYSP 1102
+FYEQH+RY+P
Sbjct: 441 DFYEQHLRYNP 451
>dbj|BAF75818.1| terminal flower 2 protein [Malus x domestica]
Length = 456
Score = 218 bits (554), Expect = 4e-54
Identities = 139/387 (35%), Positives = 200/387 (51%), Gaps = 20/387 (5%)
Frame = +2
Query: 2 RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFERTXXXXXXXXXX--QGN 175
RRKR+RKG++QYLIKWRGWPE ANTWEP++NL S D+++AFE + QG
Sbjct: 113 RRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKRKQGT 172
Query: 176 SIPQPKKKQQRSVSTSP-----------------SAKVNYNKFTHLGFTSPHPTPRDGVE 304
+ QPKK+QQRS P S +N +K L P P+ V
Sbjct: 173 PLSQPKKRQQRSSDPIPIYNMTDVEIGIVDKALSSTALNCSKLVGL------PPPQQPVV 226
Query: 305 EGKSAESSGNVDRELSYGNVGPNNAGHVGKELCYSNRGPNYAGDVDKEMDYAHAGTTDHL 484
+ E+ G+V NN + K+++
Sbjct: 227 LARDGENDGHV-----------NNI------------------EATKKVN---------- 247
Query: 485 AENGATHIYLEKSQSEEVNVADPHSSELNGV-LTHRLDDGNFSIQVPDTRSLGKDGDADE 661
ENG ++ + E N DP SEL T+ ++ S+ + ++ +G D
Sbjct: 248 VENGCSNTSQQNGGRREENEDDPKLSELRATTFTNVVNWDKVSVPFQEAKAPEVNGPTDG 307
Query: 662 QSKSGFPGNVQSSRSIGAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPV 841
SK VQS+RS GAKRRKS SVKRFK +S ++L N + + G +
Sbjct: 308 LSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSG 367
Query: 842 GEDADSSGDNARDGDRLEDAVDPSTIVKIIRPLSYSTSISNNVQDVSVTFQALRFDGRET 1021
E+ D +G N+ ++++++ + I KII+P+ YSTS+SN+VQDV VTF+A+R DG E
Sbjct: 368 AENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEV 427
Query: 1022 VVDNKFLKANNPLMLINFYEQHVRYSP 1102
+VDNK LK N+PL+LI+FYEQH+RY+P
Sbjct: 428 IVDNKSLKVNHPLLLIDFYEQHLRYNP 454