BLASTX nr result
ID: Coptis21_contig00016718
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00016718 (764 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga... 74 4e-11 emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera] 62 1e-07 dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 61 2e-07 ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana] ... 60 7e-07 dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidop... 60 7e-07 >emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 744 Score = 73.6 bits (179), Expect = 4e-11 Identities = 36/127 (28%), Positives = 70/127 (55%) Frame = -2 Query: 460 REENECTLVGKLMGGKLLILEDVVQEMHRMWQTSGQIELERLGREYVLIKFEDQTERCHV 281 RE TL+GK++G + +V+ ++R+W+T+ ++E+ LG + L KF + + Sbjct: 119 REPWRNTLMGKVLGMSIS-RNFLVERVNRIWKTNDKVEVIDLGHDVFLFKFNNGNDMEKA 177 Query: 280 LNNGPWMLEGQILSIQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGK 101 L GPW + L + W+ D + FDK+ W++ +LP + +K ++AI ++GK Sbjct: 178 LFGGPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEYYDKEALFAIAGKVGK 237 Query: 100 VVDADHS 80 + D++ Sbjct: 238 PIKVDYA 244 >emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera] Length = 833 Score = 62.0 bits (149), Expect = 1e-07 Identities = 31/119 (26%), Positives = 60/119 (50%) Frame = -2 Query: 442 TLVGKLMGGKLLILEDVVQEMHRMWQTSGQIELERLGREYVLIKFEDQTERCHVLNNGPW 263 +L+ K++G K+ L+ +HR+W G +++ LG + L+KF T+ V PW Sbjct: 103 SLIAKVLGRKVG-LQYCQAHLHRLWSLEGTVDIIDLGYGFFLLKFSLPTDYIKVFKGVPW 161 Query: 262 MLEGQILSIQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGKVVDAD 86 ++ G +S++ W + E WV++ +LP + +K + IG +G+ + D Sbjct: 162 LIHGYYISLRPWVPNFKPSEATITHAKVWVRLPELPIEYYDKEVLLQIGAAIGRTIKID 220 >dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] Length = 1898 Score = 61.2 bits (147), Expect = 2e-07 Identities = 32/113 (28%), Positives = 56/113 (49%) Frame = -2 Query: 418 GKLLILEDVVQEMHRMWQTSGQIELERLGREYVLIKFEDQTERCHVLNNGPWMLEGQILS 239 GK L + Q +WQ G++++ +G +++F+D+ + HVL +GPW + L Sbjct: 110 GKNLTANVLNQRAPSLWQLKGRVQIIDIGFGCFVMRFDDKKDYLHVLLDGPWRIFDNYLI 169 Query: 238 IQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGKVVDADHS 80 Q W D + F K+ WV++ +L + I AI E +GK + D + Sbjct: 170 TQRWVPDFKPRTAKFQKMAVWVRLSELSMEYFRDDTIKAILENIGKPLGLDRT 222 >ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana] gi|332644154|gb|AEE77675.1| uncharacterized protein [Arabidopsis thaliana] Length = 336 Score = 59.7 bits (143), Expect = 7e-07 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 2/125 (1%) Frame = -2 Query: 454 ENECTLVGKLMGGKLLILEDVVQEMHRMWQTSGQIELERL-GREYVLI-KFEDQTERCHV 281 EN L G+ + + L +V M R+W SG + + GR++ I E+ E V Sbjct: 129 ENRFILFGRPVMPRRQNLRSIVASMPRIWGQSGLVHGRIMEGRQFHFIFTLEESLET--V 186 Query: 280 LNNGPWMLEGQILSIQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGK 101 L GPW ++ +Q W PL F + FWVQI +P +N+ + IG LG+ Sbjct: 187 LRRGPWAFNDWMILLQRWEPQIPL----FPFIPFWVQIRGIPFQFLNRGVVEHIGRALGQ 242 Query: 100 VVDAD 86 V+D D Sbjct: 243 VLDTD 247 >dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidopsis thaliana] Length = 241 Score = 59.7 bits (143), Expect = 7e-07 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 2/125 (1%) Frame = -2 Query: 454 ENECTLVGKLMGGKLLILEDVVQEMHRMWQTSGQIELERL-GREYVLI-KFEDQTERCHV 281 EN L G+ + + L +V M R+W SG + + GR++ I E+ E V Sbjct: 34 ENRFILFGRPVMPRRQNLRSIVASMPRIWGQSGLVHGRIMEGRQFHFIFTLEESLET--V 91 Query: 280 LNNGPWMLEGQILSIQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGK 101 L GPW ++ +Q W PL F + FWVQI +P +N+ + IG LG+ Sbjct: 92 LRRGPWAFNDWMILLQRWEPQIPL----FPFIPFWVQIRGIPFQFLNRGVVEHIGRALGQ 147 Query: 100 VVDAD 86 V+D D Sbjct: 148 VLDTD 152