BLASTX nr result

ID: Coptis21_contig00016718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016718
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...    74   4e-11
emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]    62   1e-07
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              61   2e-07
ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana] ...    60   7e-07
dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidop...    60   7e-07

>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 36/127 (28%), Positives = 70/127 (55%)
 Frame = -2

Query: 460 REENECTLVGKLMGGKLLILEDVVQEMHRMWQTSGQIELERLGREYVLIKFEDQTERCHV 281
           RE    TL+GK++G  +     +V+ ++R+W+T+ ++E+  LG +  L KF +  +    
Sbjct: 119 REPWRNTLMGKVLGMSIS-RNFLVERVNRIWKTNDKVEVIDLGHDVFLFKFNNGNDMEKA 177

Query: 280 LNNGPWMLEGQILSIQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGK 101
           L  GPW +    L +  W+ D    +  FDK+  W++  +LP +  +K  ++AI  ++GK
Sbjct: 178 LFGGPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEYYDKEALFAIAGKVGK 237

Query: 100 VVDADHS 80
            +  D++
Sbjct: 238 PIKVDYA 244


>emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]
          Length = 833

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/119 (26%), Positives = 60/119 (50%)
 Frame = -2

Query: 442 TLVGKLMGGKLLILEDVVQEMHRMWQTSGQIELERLGREYVLIKFEDQTERCHVLNNGPW 263
           +L+ K++G K+  L+     +HR+W   G +++  LG  + L+KF   T+   V    PW
Sbjct: 103 SLIAKVLGRKVG-LQYCQAHLHRLWSLEGTVDIIDLGYGFFLLKFSLPTDYIKVFKGVPW 161

Query: 262 MLEGQILSIQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGKVVDAD 86
           ++ G  +S++ W  +    E        WV++ +LP +  +K  +  IG  +G+ +  D
Sbjct: 162 LIHGYYISLRPWVPNFKPSEATITHAKVWVRLPELPIEYYDKEVLLQIGAAIGRTIKID 220


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 32/113 (28%), Positives = 56/113 (49%)
 Frame = -2

Query: 418 GKLLILEDVVQEMHRMWQTSGQIELERLGREYVLIKFEDQTERCHVLNNGPWMLEGQILS 239
           GK L    + Q    +WQ  G++++  +G    +++F+D+ +  HVL +GPW +    L 
Sbjct: 110 GKNLTANVLNQRAPSLWQLKGRVQIIDIGFGCFVMRFDDKKDYLHVLLDGPWRIFDNYLI 169

Query: 238 IQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGKVVDADHS 80
            Q W  D   +   F K+  WV++ +L  +      I AI E +GK +  D +
Sbjct: 170 TQRWVPDFKPRTAKFQKMAVWVRLSELSMEYFRDDTIKAILENIGKPLGLDRT 222


>ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332644154|gb|AEE77675.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 336

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
 Frame = -2

Query: 454 ENECTLVGKLMGGKLLILEDVVQEMHRMWQTSGQIELERL-GREYVLI-KFEDQTERCHV 281
           EN   L G+ +  +   L  +V  M R+W  SG +    + GR++  I   E+  E   V
Sbjct: 129 ENRFILFGRPVMPRRQNLRSIVASMPRIWGQSGLVHGRIMEGRQFHFIFTLEESLET--V 186

Query: 280 LNNGPWMLEGQILSIQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGK 101
           L  GPW     ++ +Q W    PL    F  + FWVQI  +P   +N+  +  IG  LG+
Sbjct: 187 LRRGPWAFNDWMILLQRWEPQIPL----FPFIPFWVQIRGIPFQFLNRGVVEHIGRALGQ 242

Query: 100 VVDAD 86
           V+D D
Sbjct: 243 VLDTD 247


>dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidopsis thaliana]
          Length = 241

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
 Frame = -2

Query: 454 ENECTLVGKLMGGKLLILEDVVQEMHRMWQTSGQIELERL-GREYVLI-KFEDQTERCHV 281
           EN   L G+ +  +   L  +V  M R+W  SG +    + GR++  I   E+  E   V
Sbjct: 34  ENRFILFGRPVMPRRQNLRSIVASMPRIWGQSGLVHGRIMEGRQFHFIFTLEESLET--V 91

Query: 280 LNNGPWMLEGQILSIQEWRKDAPLKEICFDKVCFWVQIWDLPKDRINKANIWAIGEELGK 101
           L  GPW     ++ +Q W    PL    F  + FWVQI  +P   +N+  +  IG  LG+
Sbjct: 92  LRRGPWAFNDWMILLQRWEPQIPL----FPFIPFWVQIRGIPFQFLNRGVVEHIGRALGQ 147

Query: 100 VVDAD 86
           V+D D
Sbjct: 148 VLDTD 152


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