BLASTX nr result

ID: Coptis21_contig00016717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016717
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607536.1| hypothetical protein MTR_4g079320 [Medicago ...    63   3e-08
ref|XP_003521849.1| PREDICTED: putative DEAD-box ATP-dependent R...    55   5e-06

>ref|XP_003607536.1| hypothetical protein MTR_4g079320 [Medicago truncatula]
           gi|355508591|gb|AES89733.1| hypothetical protein
           MTR_4g079320 [Medicago truncatula]
          Length = 787

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 1/41 (2%)
 Frame = -3

Query: 361 RNYKGGKK-HGIPNAHVPSEIKNPDQVRKRRQQQASKISYM 242
           RNYKGGKK H +PNAHV SEIK+ DQ+RK RQ++ASKISYM
Sbjct: 723 RNYKGGKKQHLMPNAHVRSEIKDMDQIRKERQKKASKISYM 763


>ref|XP_003521849.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Glycine max]
          Length = 778

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/41 (60%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
 Frame = -3

Query: 361 RNYKGGKK-HGIPNAHVPSEIKNPDQVRKRRQQQASKISYM 242
           RN+KG KK H +PNAHV SEIK+ DQ+RK RQ +A+++SY+
Sbjct: 718 RNFKGSKKQHSMPNAHVRSEIKDMDQIRKERQTKANRVSYI 758


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