BLASTX nr result

ID: Coptis21_contig00016714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016714
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273421.2| PREDICTED: peptidyl-prolyl cis-trans isomera...   335   1e-89
emb|CAN69876.1| hypothetical protein VITISV_015631 [Vitis vinifera]   334   2e-89
ref|XP_002301464.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84
ref|XP_002515157.1| peptidyl-prolyl cis-trans isomerase, putativ...   310   3e-82
ref|NP_001240987.1| uncharacterized protein LOC100785805 [Glycin...   308   2e-81

>ref|XP_002273421.2| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-3,
           chloroplastic-like isoform 1 [Vitis vinifera]
           gi|297744066|emb|CBI37036.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  335 bits (859), Expect = 1e-89
 Identities = 173/259 (66%), Positives = 195/259 (75%), Gaps = 8/259 (3%)
 Frame = +1

Query: 16  MASSFSLGMSSHTLAFQTGFSKDVSNVCKPHMF--------LKCHGRVFSSSSKYAGALL 171
           MAS+FS         FQ  FSKD+ ++ +  +         L CHGR  +S S YA    
Sbjct: 1   MASAFS-----SCSVFQAVFSKDIPSLPRRPVVSCIGKTPTLSCHGRGLASKSHYASCF- 54

Query: 172 NIKQTSSTVTSAGYKRMVCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIVIGLYGDDV 351
           +I   S  V SAG++R++C NSMA  VELQAKVTTKCFFDVD+GGEP+GRIVIGL+G+ V
Sbjct: 55  SITPLSK-VNSAGHRRLMCVNSMANEVELQAKVTTKCFFDVDIGGEPVGRIVIGLFGEVV 113

Query: 352 PKTVENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGSKFEDENFN 531
           PKT ENFR LCTGEKGYGYKGCSFHRIIKDFMIQ            +SIYGS FEDENF 
Sbjct: 114 PKTAENFRVLCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDENFA 173

Query: 532 LKHVGPGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVVKGMDVVRKLESQETSR 711
           L HVGPGVLSMANAGP+TNGSQFFICTVKTPWLD+RHVVFGHV+ GMDVVRKLESQETSR
Sbjct: 174 LTHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDRRHVVFGHVIDGMDVVRKLESQETSR 233

Query: 712 SDIPQLPCRIINSGELPLD 768
           SD P+L CRIIN GELP+D
Sbjct: 234 SDYPKLTCRIINCGELPMD 252


>emb|CAN69876.1| hypothetical protein VITISV_015631 [Vitis vinifera]
          Length = 253

 Score =  334 bits (856), Expect = 2e-89
 Identities = 172/259 (66%), Positives = 195/259 (75%), Gaps = 8/259 (3%)
 Frame = +1

Query: 16  MASSFSLGMSSHTLAFQTGFSKDVSNVCKPHMF--------LKCHGRVFSSSSKYAGALL 171
           MAS+FS         FQ  FSKD+ ++ +  +         L CHGR  +S S YA    
Sbjct: 1   MASAFS-----SCSVFQAVFSKDIPSLPRRPVVSCIGKTPTLSCHGRGLASKSHYASCF- 54

Query: 172 NIKQTSSTVTSAGYKRMVCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIVIGLYGDDV 351
           +I   S   +SAG++R++C NSMA  VELQAKVTTKCFFDVD+GGEP+GRIVIGL+G+ V
Sbjct: 55  SITPLSKA-SSAGHRRLMCVNSMANEVELQAKVTTKCFFDVDIGGEPVGRIVIGLFGEVV 113

Query: 352 PKTVENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGSKFEDENFN 531
           PKT ENFR LCTGEKGYGYKGCSFHRIIKDFMIQ            +SIYGS FEDENF 
Sbjct: 114 PKTAENFRVLCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDENFA 173

Query: 532 LKHVGPGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVVKGMDVVRKLESQETSR 711
           L HVGPGVLSMANAGP+TNGSQFFICTVKTPWLD+RHVVFGHV+ GMDVVRKLESQETSR
Sbjct: 174 LTHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDRRHVVFGHVIDGMDVVRKLESQETSR 233

Query: 712 SDIPQLPCRIINSGELPLD 768
           SD P+L CRIIN GELP+D
Sbjct: 234 SDYPKLTCRIINCGELPMD 252


>ref|XP_002301464.1| predicted protein [Populus trichocarpa] gi|222843190|gb|EEE80737.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  318 bits (816), Expect = 1e-84
 Identities = 165/267 (61%), Positives = 190/267 (71%), Gaps = 16/267 (5%)
 Frame = +1

Query: 16  MASSFSLGMS-SHTLAFQTGFSKDVSNVCKPHMF---------------LKCHGRVFSSS 147
           MAS+ S+ M+ S  L  Q  + +D  N  +PH                 L C GR  +S 
Sbjct: 1   MASTSSMQMAHSPRLVIQGSYEQDFLNTSRPHKISTIRNARGGYSQTPTLNCLGRALTSR 60

Query: 148 SKYAGALLNIKQTSSTVTSAGYKRMVCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIV 327
           S YA     I+   +       +RM C+NSMA  V+LQAKVTTKCFFDV+VGGE +GRIV
Sbjct: 61  SHYASKFPIIRLPKAPYIKN--QRMACANSMANDVDLQAKVTTKCFFDVEVGGELVGRIV 118

Query: 328 IGLYGDDVPKTVENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGS 507
           +GL+GD VPKT ENFRALCTG+KGYGYKGCSFHRIIKDFMIQ             SIYGS
Sbjct: 119 MGLFGDVVPKTAENFRALCTGDKGYGYKGCSFHRIIKDFMIQGGDFTRGDGTGGKSIYGS 178

Query: 508 KFEDENFNLKHVGPGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVVKGMDVVRK 687
            FEDE+F+LKHVGPGVLSMANAGP+TNGSQFFIC+VKTPWLD RHVVFGHV+ GMDVVRK
Sbjct: 179 SFEDESFSLKHVGPGVLSMANAGPNTNGSQFFICSVKTPWLDNRHVVFGHVIDGMDVVRK 238

Query: 688 LESQETSRSDIPQLPCRIINSGELPLD 768
           LES ETSRSD P+ PCR++NSGELPLD
Sbjct: 239 LESVETSRSDNPRKPCRVVNSGELPLD 265


>ref|XP_002515157.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
           gi|223545637|gb|EEF47141.1| peptidyl-prolyl cis-trans
           isomerase, putative [Ricinus communis]
          Length = 261

 Score =  310 bits (795), Expect = 3e-82
 Identities = 165/264 (62%), Positives = 191/264 (72%), Gaps = 12/264 (4%)
 Frame = +1

Query: 16  MASSFSLG-MSSHTLAFQTGFSKDVSNVCKPHMF----------LKCHGRVFSSSSKYAG 162
           MAS+FSL  + +  L F+    +DV N+ +  M           L   GR  +S S+Y+ 
Sbjct: 1   MASTFSLQTVPAPRLVFKGTDGQDVKNLSRTCMISAMRSSASGTLSFAGRALTSRSRYS- 59

Query: 163 ALLNIKQTS-STVTSAGYKRMVCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIVIGLY 339
             L+   T  S   S  ++RM C  +MA  +E+QAKVTTK FFDVD+GGEP GRIV+GL+
Sbjct: 60  --LSFPITQLSKAPSVKHQRMACIKAMANDLEVQAKVTTKVFFDVDIGGEPAGRIVMGLF 117

Query: 340 GDDVPKTVENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGSKFED 519
           GD VPKT ENFRALCTG+KGYGYKGCSFHRIIKDFMIQ            VSI+GS FED
Sbjct: 118 GDVVPKTAENFRALCTGDKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGVSIFGSSFED 177

Query: 520 ENFNLKHVGPGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVVKGMDVVRKLESQ 699
           E+F+LKHVGPGVLSMANAGP+TNGSQFFICTVKTPWLD RHVVFG V+ GMDVVRKLES 
Sbjct: 178 ESFDLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGQVIDGMDVVRKLESV 237

Query: 700 ETSRSDIPQLPCRIINSGELPLDG 771
           ETSRSD P+ PCRIIN GELPLDG
Sbjct: 238 ETSRSDYPRKPCRIINCGELPLDG 261


>ref|NP_001240987.1| uncharacterized protein LOC100785805 [Glycine max]
           gi|255645203|gb|ACU23099.1| unknown [Glycine max]
          Length = 260

 Score =  308 bits (788), Expect = 2e-81
 Identities = 155/243 (63%), Positives = 181/243 (74%), Gaps = 7/243 (2%)
 Frame = +1

Query: 64  QTGFSKDVSNVCKPHMF-------LKCHGRVFSSSSKYAGALLNIKQTSSTVTSAGYKRM 222
           Q  FS+DVS V +  +        L  +G+  +S S  A      +Q  S   S GY+RM
Sbjct: 20  QGNFSQDVSKVQRSRVVCYGTRSPLGYYGKALTSRSHNALRFSVTRQ--SEARSIGYRRM 77

Query: 223 VCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIVIGLYGDDVPKTVENFRALCTGEKGY 402
            C N+    VELQAKVTTKCFFDV+VGGEP+GRIV+GL+G+ VPKTVENFRALCTGEKGY
Sbjct: 78  TCVNAADNVVELQAKVTTKCFFDVEVGGEPVGRIVLGLFGEVVPKTVENFRALCTGEKGY 137

Query: 403 GYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGSKFEDENFNLKHVGPGVLSMANAGPD 582
           GYKG SFHRIIKDFMIQ            +SIYG  F+DE+F LKHVGPGVLSMANAGP+
Sbjct: 138 GYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGPSFKDESFALKHVGPGVLSMANAGPN 197

Query: 583 TNGSQFFICTVKTPWLDKRHVVFGHVVKGMDVVRKLESQETSRSDIPQLPCRIINSGELP 762
           TNGSQFFICTVKTPWLD RHVVFGH++ GMDVV+ LESQETSR D+P+ PCRI+N GELP
Sbjct: 198 TNGSQFFICTVKTPWLDNRHVVFGHIIDGMDVVKTLESQETSRLDVPRKPCRIVNCGELP 257

Query: 763 LDG 771
           ++G
Sbjct: 258 IEG 260


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