BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016708
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho...   253   1e-65
gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indi...   251   4e-65
ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group] g...   251   4e-65
ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicag...   251   6e-65
gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]      251   6e-65

>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 213

 Score =  253 bits (646), Expect = 1e-65
 Identities = 114/148 (77%), Positives = 139/148 (93%)
 Frame = -3

Query: 553 YDEFIANKKELEPQGVDPKRGWGFRGVHKAIICGKIGQVPVQKILRNGKTVTIFTVGTGG 374
           +D+F+  K EL+ QGVDP++GWGFRGVHKAIICGK+GQ PVQKILRNG+TVTIFTVGTGG
Sbjct: 57  FDDFLGEKPELQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGG 116

Query: 373 MYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKGSSVFVEGDIETRVYNDSINGQ 194
           M+DQRI+GA++LPKPAQWHRIAVHNE LGAY+VQQL K SSV+VEG+IETRVYNDSI+G+
Sbjct: 117 MFDQRIVGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGE 176

Query: 193 VKNVPEICVRRDGKVRLIKTGESVSNIS 110
           VKN+PEIC+RRDGK+RL+ +G++VS+IS
Sbjct: 177 VKNIPEICIRRDGKIRLVTSGKNVSDIS 204


>gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indica Group]
           gi|222632182|gb|EEE64314.1| hypothetical protein
           OsJ_19151 [Oryza sativa Japonica Group]
          Length = 245

 Score =  251 bits (642), Expect = 4e-65
 Identities = 112/149 (75%), Positives = 140/149 (93%)
 Frame = -3

Query: 556 GYDEFIANKKELEPQGVDPKRGWGFRGVHKAIICGKIGQVPVQKILRNGKTVTIFTVGTG 377
           G D++  +++ELEPQ VDPK+GWGFRGVH+AIICGK+GQVPVQKILRNG+TVT+FTVGTG
Sbjct: 88  GDDDYTDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGTG 147

Query: 376 GMYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKGSSVFVEGDIETRVYNDSING 197
           GM+DQR++G  +LPKPAQWHRIA+HN++LGA++VQ+LVK S+V+VEGDIETRVYNDSIN 
Sbjct: 148 GMFDQRVVGDADLPKPAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRVYNDSIND 207

Query: 196 QVKNVPEICVRRDGKVRLIKTGESVSNIS 110
           QVKN+PEIC+RRDGK+RLIK+GES ++IS
Sbjct: 208 QVKNIPEICLRRDGKIRLIKSGESAASIS 236


>ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group]
           gi|48475206|gb|AAT44275.1| putative single-strand DNA
           binding protein [Oryza sativa Japonica Group]
           gi|113579555|dbj|BAF17918.1| Os05g0509700 [Oryza sativa
           Japonica Group] gi|215706976|dbj|BAG93436.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 206

 Score =  251 bits (642), Expect = 4e-65
 Identities = 112/149 (75%), Positives = 140/149 (93%)
 Frame = -3

Query: 556 GYDEFIANKKELEPQGVDPKRGWGFRGVHKAIICGKIGQVPVQKILRNGKTVTIFTVGTG 377
           G D++  +++ELEPQ VDPK+GWGFRGVH+AIICGK+GQVPVQKILRNG+TVT+FTVGTG
Sbjct: 49  GDDDYTDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGTG 108

Query: 376 GMYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKGSSVFVEGDIETRVYNDSING 197
           GM+DQR++G  +LPKPAQWHRIA+HN++LGA++VQ+LVK S+V+VEGDIETRVYNDSIN 
Sbjct: 109 GMFDQRVVGDADLPKPAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRVYNDSIND 168

Query: 196 QVKNVPEICVRRDGKVRLIKTGESVSNIS 110
           QVKN+PEIC+RRDGK+RLIK+GES ++IS
Sbjct: 169 QVKNIPEICLRRDGKIRLIKSGESAASIS 197


>ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355480238|gb|AES61441.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
           gi|388493454|gb|AFK34793.1| unknown [Medicago
           truncatula]
          Length = 212

 Score =  251 bits (641), Expect = 6e-65
 Identities = 116/148 (78%), Positives = 135/148 (91%)
 Frame = -3

Query: 553 YDEFIANKKELEPQGVDPKRGWGFRGVHKAIICGKIGQVPVQKILRNGKTVTIFTVGTGG 374
           +D+F+  + EL+ QGVDP RGWGFRGVHKAIICGK+GQ PVQKILRNGK VTIFTVGTGG
Sbjct: 56  FDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG 115

Query: 373 MYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKGSSVFVEGDIETRVYNDSINGQ 194
           MYDQRI+G+++LPKPAQWHRIAVHNE LGAY+VQQL K SSV+VEG+IETRVYNDSING+
Sbjct: 116 MYDQRIVGSKDLPKPAQWHRIAVHNEVLGAYAVQQLFKNSSVYVEGEIETRVYNDSINGE 175

Query: 193 VKNVPEICVRRDGKVRLIKTGESVSNIS 110
           VK++PEICVRRDGK+RLI++GESV   S
Sbjct: 176 VKSIPEICVRRDGKLRLIRSGESVDKTS 203


>gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]
          Length = 216

 Score =  251 bits (641), Expect = 6e-65
 Identities = 116/148 (78%), Positives = 135/148 (91%)
 Frame = -3

Query: 553 YDEFIANKKELEPQGVDPKRGWGFRGVHKAIICGKIGQVPVQKILRNGKTVTIFTVGTGG 374
           +D+F+  + EL+ QGVDP RGWGFRGVHKAIICGK+GQ PVQKILRNGK VTIFTVGTGG
Sbjct: 56  FDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG 115

Query: 373 MYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKGSSVFVEGDIETRVYNDSINGQ 194
           MYDQRI+G+++LPKPAQWHRIAVHNE LGAY+VQQL K SSV+VEG+IETRVYNDSING+
Sbjct: 116 MYDQRIVGSKDLPKPAQWHRIAVHNEVLGAYAVQQLFKNSSVYVEGEIETRVYNDSINGE 175

Query: 193 VKNVPEICVRRDGKVRLIKTGESVSNIS 110
           VK++PEICVRRDGK+RLI++GESV   S
Sbjct: 176 VKSIPEICVRRDGKLRLIRSGESVDKTS 203