BLASTX nr result

ID: Coptis21_contig00016704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016704
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24703.3| unnamed protein product [Vitis vinifera]              124   1e-42
ref|XP_003632086.1| PREDICTED: syntaxin-61-like [Vitis vinifera]...   124   1e-42
ref|XP_003617552.1| Syntaxin-61 [Medicago truncatula] gi|3555188...   111   3e-37
gb|AFK40078.1| unknown [Medicago truncatula]                          111   3e-37
ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-37

>emb|CBI24703.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  124 bits (312), Expect(2) = 1e-42
 Identities = 64/83 (77%), Positives = 73/83 (87%)
 Frame = +2

Query: 233 TSNVNGMRQELMRFPNDSPYQASRSNQYGARDNDDFISSESDRQLLLMRQQDEELDELSA 412
           T+NVNGMR+E+MR  N  P+QA RSNQYG++DNDDFISSESDRQLLL+R+QDEELD LSA
Sbjct: 167 TANVNGMRREMMRMSN--PHQADRSNQYGSQDNDDFISSESDRQLLLIRRQDEELDVLSA 224

Query: 413 SVVRIGDVGLTIHDELTGQEKII 481
           SV RIG VGLTIH+EL  QEKII
Sbjct: 225 SVERIGGVGLTIHEELLAQEKII 247



 Score = 73.6 bits (179), Expect(2) = 1e-42
 Identities = 34/48 (70%), Positives = 42/48 (87%)
 Frame = +1

Query: 1   IAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSVEAGKEQNNT 144
           I+VAA+DPA++ IDEVEL+KR+RWTSTA TQV+ V+KSV AGKE N T
Sbjct: 118 ISVAAKDPAWYGIDEVELDKRRRWTSTAHTQVSNVKKSVVAGKESNGT 165


>ref|XP_003632086.1| PREDICTED: syntaxin-61-like [Vitis vinifera]
           gi|147821239|emb|CAN72346.1| hypothetical protein
           VITISV_034578 [Vitis vinifera]
          Length = 247

 Score =  124 bits (312), Expect(2) = 1e-42
 Identities = 64/83 (77%), Positives = 73/83 (87%)
 Frame = +2

Query: 233 TSNVNGMRQELMRFPNDSPYQASRSNQYGARDNDDFISSESDRQLLLMRQQDEELDELSA 412
           T+NVNGMR+E+MR  N  P+QA RSNQYG++DNDDFISSESDRQLLL+R+QDEELD LSA
Sbjct: 113 TANVNGMRREMMRMSN--PHQADRSNQYGSQDNDDFISSESDRQLLLIRRQDEELDVLSA 170

Query: 413 SVVRIGDVGLTIHDELTGQEKII 481
           SV RIG VGLTIH+EL  QEKII
Sbjct: 171 SVERIGGVGLTIHEELLAQEKII 193



 Score = 73.6 bits (179), Expect(2) = 1e-42
 Identities = 34/48 (70%), Positives = 42/48 (87%)
 Frame = +1

Query: 1   IAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSVEAGKEQNNT 144
           I+VAA+DPA++ IDEVEL+KR+RWTSTA TQV+ V+KSV AGKE N T
Sbjct: 64  ISVAAKDPAWYGIDEVELDKRRRWTSTAHTQVSNVKKSVVAGKESNGT 111


>ref|XP_003617552.1| Syntaxin-61 [Medicago truncatula] gi|355518887|gb|AET00511.1|
           Syntaxin-61 [Medicago truncatula]
          Length = 258

 Score =  111 bits (278), Expect(2) = 3e-37
 Identities = 56/82 (68%), Positives = 68/82 (82%)
 Frame = +2

Query: 236 SNVNGMRQELMRFPNDSPYQASRSNQYGARDNDDFISSESDRQLLLMRQQDEELDELSAS 415
           ++++GM +ELMR P DS    S+SNQY + DNDDFI SESDRQ+LL++QQDEELDELS S
Sbjct: 113 ASISGMHRELMRLP-DSHQSTSKSNQYASGDNDDFIESESDRQMLLIKQQDEELDELSLS 171

Query: 416 VVRIGDVGLTIHDELTGQEKII 481
           V RIG VGLTIH+EL GQEKI+
Sbjct: 172 VQRIGGVGLTIHEELLGQEKIL 193



 Score = 68.6 bits (166), Expect(2) = 3e-37
 Identities = 30/48 (62%), Positives = 41/48 (85%)
 Frame = +1

Query: 1   IAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSVEAGKEQNNT 144
           I+VA+RDP+++ IDEVE+E R+RWTS ARTQV T++++VEAGK  N T
Sbjct: 63  ISVASRDPSWYGIDEVEIENRRRWTSNARTQVRTIKRTVEAGKGSNPT 110


>gb|AFK40078.1| unknown [Medicago truncatula]
          Length = 247

 Score =  111 bits (278), Expect(2) = 3e-37
 Identities = 56/82 (68%), Positives = 68/82 (82%)
 Frame = +2

Query: 236 SNVNGMRQELMRFPNDSPYQASRSNQYGARDNDDFISSESDRQLLLMRQQDEELDELSAS 415
           ++++GM +ELMR P DS    S+SNQY + DNDDFI SESDRQ+LL++QQDEELDELS S
Sbjct: 113 ASISGMHRELMRLP-DSHQSTSKSNQYASGDNDDFIESESDRQMLLIKQQDEELDELSLS 171

Query: 416 VVRIGDVGLTIHDELTGQEKII 481
           V RIG VGLTIH+EL GQEKI+
Sbjct: 172 VQRIGGVGLTIHEELLGQEKIL 193



 Score = 68.6 bits (166), Expect(2) = 3e-37
 Identities = 30/48 (62%), Positives = 41/48 (85%)
 Frame = +1

Query: 1   IAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSVEAGKEQNNT 144
           I+VA+RDP+++ IDEVE+E R+RWTS ARTQV T++++VEAGK  N T
Sbjct: 63  ISVASRDPSWYGIDEVEIENRRRWTSNARTQVRTIKRTVEAGKGSNPT 110


>ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|222848737|gb|EEE86284.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  108 bits (271), Expect(2) = 4e-37
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +2

Query: 233 TSNVNGMRQELMRFPNDSPYQASRSNQYGARDNDDFISSESDRQLLLMRQQDEELDELSA 412
           T++VNGMR+ELMR P+    Q  +SNQY  +DNDDFI SESDRQ+LL++QQD+ELDELSA
Sbjct: 113 TASVNGMRRELMRMPDAQ--QTDKSNQY-TQDNDDFIQSESDRQMLLIKQQDDELDELSA 169

Query: 413 SVVRIGDVGLTIHDELTGQEKII 481
           SV RIG VGLTIH+EL  QE+II
Sbjct: 170 SVERIGGVGLTIHEELLAQERII 192



 Score = 70.9 bits (172), Expect(2) = 4e-37
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = +1

Query: 1   IAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSVEAGKEQN 138
           I+VAARDP+++ IDE ELEKR+RWTSTARTQV  V+K+V AGKE N
Sbjct: 64  ISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELN 109


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