BLASTX nr result

ID: Coptis21_contig00016702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016702
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314895.1| white-brown-complex ABC transporter family [...   428   e-117
emb|CBI27088.3| unnamed protein product [Vitis vinifera]              426   e-117
emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]   426   e-117
ref|XP_002524381.1| ATP-binding cassette transporter, putative [...   426   e-117
ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   424   e-116

>ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222863935|gb|EEF01066.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 683

 Score =  428 bits (1100), Expect = e-117
 Identities = 214/320 (66%), Positives = 249/320 (77%)
 Frame = -2

Query: 1164 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQFKV 985
            D QNS KQSLISSYK N++ +L +E+H+N +D                         FKV
Sbjct: 367  DDQNSAKQSLISSYKNNLYPLLISEIHRNAQDPVLPSSSLRGSEVQWTTSCWQQ---FKV 423

Query: 984  LVKRGLKERKHESYSGLKVFQVMSVSILSGLLWWHSNPAHIHDQVGLLFFLSIFWGFFPL 805
            L++RGL+ERKHESYSGL++FQV+SVSILSGLLWWHS+ +HI DQVGLLFF SIFWGFFPL
Sbjct: 424  LLRRGLQERKHESYSGLRIFQVISVSILSGLLWWHSDTSHIQDQVGLLFFFSIFWGFFPL 483

Query: 804  FNAIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKPS 625
            FNAIF FPQERPMLIKERSSGMYRLSSYYFAR+AGDLPMELV+PTI V +TYWM GLKPS
Sbjct: 484  FNAIFAFPQERPMLIKERSSGMYRLSSYYFARMAGDLPMELVMPTIFVTVTYWMGGLKPS 543

Query: 624  XXXXXXXXXXXXXXXXVSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPSF 445
                            VSQGLGLALGA++MDVKQATTLASVTML+FLLAGGYYIQHIP F
Sbjct: 544  LITFVLTLLVILFNVLVSQGLGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQHIPPF 603

Query: 444  IAWLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAMV 265
            IAWLKYISFSHYCYKLL+GVQYS T+ Y CG  + C+V++FPAI++LGLD+   D  A+ 
Sbjct: 604  IAWLKYISFSHYCYKLLVGVQYSATEVYDCGLQMHCRVMDFPAIKYLGLDNMWWDAAALT 663

Query: 264  LMLVGYRVMAYVALKNRLTH 205
            +MLVGYR++AYVAL+    H
Sbjct: 664  IMLVGYRLLAYVALRMGQPH 683


>emb|CBI27088.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  426 bits (1095), Expect = e-117
 Identities = 210/315 (66%), Positives = 244/315 (77%)
 Frame = -2

Query: 1164 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQFKV 985
            D QNS+KQ+LISSYKK+++ +++AE+H+N                           QFKV
Sbjct: 357  DDQNSIKQALISSYKKSLYHIMRAEIHRNSHGSDGSASGPLSSRGCENQWTSSWWEQFKV 416

Query: 984  LVKRGLKERKHESYSGLKVFQVMSVSILSGLLWWHSNPAHIHDQVGLLFFLSIFWGFFPL 805
            L++RGL+ERKHESYSGL++FQVMSVSILSGLLWWHS+ +HI DQVGLLFF SIFWGFFPL
Sbjct: 417  LLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGLLFFFSIFWGFFPL 476

Query: 804  FNAIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKPS 625
            FNAIFTFPQERPMLI+ERSSGMYRLSSYYFAR+AGDLPMELVLPTI V I YWM GLKPS
Sbjct: 477  FNAIFTFPQERPMLIRERSSGMYRLSSYYFARMAGDLPMELVLPTIFVTIAYWMGGLKPS 536

Query: 624  XXXXXXXXXXXXXXXXVSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPSF 445
                            VSQGLGLALGA+IMDVKQ T LASVTML+FLLAGGYYIQHIP F
Sbjct: 537  LLTFVLTLLVILYNVLVSQGLGLALGAIIMDVKQGTALASVTMLVFLLAGGYYIQHIPPF 596

Query: 444  IAWLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAMV 265
            IAWLKYISFSHYCYKLL+GVQY++ + Y CG  + CKV EFPAI++LG+D    D+ A+ 
Sbjct: 597  IAWLKYISFSHYCYKLLVGVQYAENEVYECGLRMHCKVWEFPAIKYLGIDHWAWDVAALT 656

Query: 264  LMLVGYRVMAYVALK 220
            +M VGYR +AY AL+
Sbjct: 657  VMFVGYRALAYAALR 671


>emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]
          Length = 696

 Score =  426 bits (1095), Expect = e-117
 Identities = 210/315 (66%), Positives = 244/315 (77%)
 Frame = -2

Query: 1164 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQFKV 985
            D QNS+KQ+LISSYKK+++ +++AE+H+N                           QFKV
Sbjct: 377  DDQNSIKQALISSYKKSLYHIMRAEIHRNSHGSDGSASGPLSSRGCENQWTSSWWEQFKV 436

Query: 984  LVKRGLKERKHESYSGLKVFQVMSVSILSGLLWWHSNPAHIHDQVGLLFFLSIFWGFFPL 805
            L++RGL+ERKHESYSGL++FQVMSVSILSGLLWWHS+ +HI DQVGLLFF SIFWGFFPL
Sbjct: 437  LLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGLLFFFSIFWGFFPL 496

Query: 804  FNAIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKPS 625
            FNAIFTFPQERPMLI+ERSSGMYRLSSYYFAR+AGDLPMELVLPTI V I YWM GLKPS
Sbjct: 497  FNAIFTFPQERPMLIRERSSGMYRLSSYYFARMAGDLPMELVLPTIFVTIAYWMGGLKPS 556

Query: 624  XXXXXXXXXXXXXXXXVSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPSF 445
                            VSQGLGLALGA+IMDVKQ T LASVTML+FLLAGGYYIQHIP F
Sbjct: 557  LLTFVLTLLVILYNVLVSQGLGLALGAIIMDVKQGTALASVTMLVFLLAGGYYIQHIPPF 616

Query: 444  IAWLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAMV 265
            IAWLKYISFSHYCYKLL+GVQY++ + Y CG  + CKV EFPAI++LG+D    D+ A+ 
Sbjct: 617  IAWLKYISFSHYCYKLLVGVQYAENEVYECGLRMHCKVWEFPAIKYLGIDHWAWDVAALT 676

Query: 264  LMLVGYRVMAYVALK 220
            +M VGYR +AY AL+
Sbjct: 677  VMFVGYRALAYAALR 691


>ref|XP_002524381.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223536342|gb|EEF37992.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 709

 Score =  426 bits (1094), Expect = e-117
 Identities = 214/321 (66%), Positives = 250/321 (77%), Gaps = 1/321 (0%)
 Frame = -2

Query: 1164 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQ-FK 988
            D Q+S+KQSLISSYKKN++  LKAE+ +N +D                        Q FK
Sbjct: 389  DDQSSIKQSLISSYKKNLYPALKAEIRRNSQDPVLPSSTGTSSLRNSENQWATTWWQQFK 448

Query: 987  VLVKRGLKERKHESYSGLKVFQVMSVSILSGLLWWHSNPAHIHDQVGLLFFLSIFWGFFP 808
            VL++RGL+ERKHESYSGL++FQVMSVSILSGLLWWHS+ +HI DQVGLLFF SIFWGFFP
Sbjct: 449  VLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGLLFFFSIFWGFFP 508

Query: 807  LFNAIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKP 628
            LFNAIF FPQERP+LIKERSSGMYRLSSYYFAR+AGDLPMELV+P I V + YWM GLKP
Sbjct: 509  LFNAIFAFPQERPILIKERSSGMYRLSSYYFARMAGDLPMELVMPIIFVTVAYWMGGLKP 568

Query: 627  SXXXXXXXXXXXXXXXXVSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPS 448
            S                VSQGLGLALGAV+MDVKQ TTLASVTML+FLLAGGYYIQHIP+
Sbjct: 569  SLITFVLTLLIILFNVLVSQGLGLALGAVLMDVKQGTTLASVTMLVFLLAGGYYIQHIPA 628

Query: 447  FIAWLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAM 268
            FIAWLKYISFSHYCYKLL+GVQYS  + Y C AG+ C+V++FPAI++LGLD+   D+ A+
Sbjct: 629  FIAWLKYISFSHYCYKLLVGVQYSVNEVYECEAGMHCRVMDFPAIRYLGLDNMWWDVAAL 688

Query: 267  VLMLVGYRVMAYVALKNRLTH 205
            ++MLVGYR +AYVAL+    H
Sbjct: 689  LIMLVGYRFLAYVALRMGQPH 709


>ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
            21-like [Vitis vinifera]
          Length = 677

 Score =  424 bits (1090), Expect = e-116
 Identities = 212/316 (67%), Positives = 246/316 (77%), Gaps = 1/316 (0%)
 Frame = -2

Query: 1164 DKQNSMKQSLISSYKKNMHGVLKAELHQNDR-DXXXXXXXXXXXXXXXXXXXXXXXXQFK 988
            D QNS+KQ+LISSYKK+++ +++AE+H+N   D                        QFK
Sbjct: 357  DDQNSIKQALISSYKKSLYHIMRAEIHRNSHADSXKFVLISKGVAGCENQWTSSWWEQFK 416

Query: 987  VLVKRGLKERKHESYSGLKVFQVMSVSILSGLLWWHSNPAHIHDQVGLLFFLSIFWGFFP 808
            VL++RGL+ERKHESYSGL++FQVMSVSILSGLLWWHS+ +HI DQVGLLFF SIFWGFFP
Sbjct: 417  VLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGLLFFFSIFWGFFP 476

Query: 807  LFNAIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKP 628
            LFNAIFTFPQERPMLI+ERSSGMYRLSSYYFAR+AGDLPMELVLPTI V I YWM GLKP
Sbjct: 477  LFNAIFTFPQERPMLIRERSSGMYRLSSYYFARMAGDLPMELVLPTIFVTIAYWMGGLKP 536

Query: 627  SXXXXXXXXXXXXXXXXVSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPS 448
            S                VSQGLGLALGA+IMDVKQ T LASVTML+FLLAGGYYIQHIP 
Sbjct: 537  SLLTFVLTLLVILYNVLVSQGLGLALGAIIMDVKQGTALASVTMLVFLLAGGYYIQHIPP 596

Query: 447  FIAWLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDLLAM 268
            FIAWLKYISFSHYCYKLL+GVQY++ + Y CG  + CKV EFPAI++LG+D    D+ A+
Sbjct: 597  FIAWLKYISFSHYCYKLLVGVQYAENEVYECGLRMHCKVWEFPAIKYLGIDHWAWDVAAL 656

Query: 267  VLMLVGYRVMAYVALK 220
             +M VGYR +AY AL+
Sbjct: 657  TVMFVGYRALAYAALR 672


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