BLASTX nr result

ID: Coptis21_contig00016690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016690
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877784.1| hypothetical protein ARALYDRAFT_485453 [Arab...    68   4e-20
ref|NP_566942.1| uncharacterized protein [Arabidopsis thaliana] ...    67   9e-20
gb|AAM62545.1| unknown [Arabidopsis thaliana]                          67   9e-20
ref|XP_002267827.2| PREDICTED: dimethyladenosine transferase-lik...   100   2e-19
emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera]   100   5e-19

>ref|XP_002877784.1| hypothetical protein ARALYDRAFT_485453 [Arabidopsis lyrata subsp.
           lyrata] gi|297323622|gb|EFH54043.1| hypothetical protein
           ARALYDRAFT_485453 [Arabidopsis lyrata subsp. lyrata]
          Length = 188

 Score = 68.2 bits (165), Expect(2) = 4e-20
 Identities = 36/48 (75%), Positives = 40/48 (83%)
 Frame = +2

Query: 410 PILANKPNEGSVKNRNANEKKRIAQRKAFIKSEAKKRKVLVQEAKKKK 553
           PI +N PNEGSVK RNA  KKRIAQR+AFI SE KKR+ LVQEAK+KK
Sbjct: 105 PISSNNPNEGSVKRRNA--KKRIAQRRAFILSEKKKRQALVQEAKRKK 150



 Score = 55.8 bits (133), Expect(2) = 4e-20
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +3

Query: 543 KRKKRNLRIEREMAAVARDRAWAQRLAELQKLETEKANT 659
           KRKKR  ++ER+MAAVARDRAWA+RL EL++ E EK N+
Sbjct: 147 KRKKRIKQVERKMAAVARDRAWAERLTELKQFEEEKKNS 185


>ref|NP_566942.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6562253|emb|CAB62623.1| hypothetical protein
           [Arabidopsis thaliana] gi|98960951|gb|ABF58959.1|
           At3g51010 [Arabidopsis thaliana]
           gi|332645216|gb|AEE78737.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 188

 Score = 66.6 bits (161), Expect(2) = 9e-20
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 410 PILANKPNEGSVKNRNANEKKRIAQRKAFIKSEAKKRKVLVQEAKKKK 553
           PI +N PNEGSVK RNA  KKRI QR+AFI SE KKR+ LVQEAK+KK
Sbjct: 105 PISSNNPNEGSVKRRNA--KKRIGQRRAFILSEKKKRQALVQEAKRKK 150



 Score = 56.2 bits (134), Expect(2) = 9e-20
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +3

Query: 543 KRKKRNLRIEREMAAVARDRAWAQRLAELQKLETEK 650
           KRKKR  ++ER+MAAVARDRAWA+RL ELQ+LE EK
Sbjct: 147 KRKKRIKQVERKMAAVARDRAWAERLIELQQLEEEK 182


>gb|AAM62545.1| unknown [Arabidopsis thaliana]
          Length = 188

 Score = 66.6 bits (161), Expect(2) = 9e-20
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 410 PILANKPNEGSVKNRNANEKKRIAQRKAFIKSEAKKRKVLVQEAKKKK 553
           PI +N PNEGSVK RNA  KKRI QR+AFI SE KKR+ LVQEAK+KK
Sbjct: 105 PISSNNPNEGSVKRRNA--KKRIGQRRAFILSEKKKRQALVQEAKRKK 150



 Score = 56.2 bits (134), Expect(2) = 9e-20
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +3

Query: 543 KRKKRNLRIEREMAAVARDRAWAQRLAELQKLETEK 650
           KRKKR  ++ER+MAAVARDRAWA+RL ELQ+LE EK
Sbjct: 147 KRKKRIKQVERKMAAVARDRAWAERLIELQQLEEEK 182


>ref|XP_002267827.2| PREDICTED: dimethyladenosine transferase-like [Vitis vinifera]
          Length = 355

 Score =  100 bits (250), Expect = 2e-19
 Identities = 61/126 (48%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
 Frame = +1

Query: 1   AFTRTCFSKKNKTLGATFKQKRKVVELFKRSQMIDVFEENGVEQYSFXXXXXXXXXXXXX 180
           AFTRTCFSKKNKTLGATFK KR+V+EL++ S +      N V   ++             
Sbjct: 215 AFTRTCFSKKNKTLGATFKHKRRVMELWRLSNLRGSETGNAVSGCNYDCSYDEDKEEEEG 274

Query: 181 XCS-------LVCSEMAMSLFKDKIVGVLKAGEFEDKRPSKXXXXXXXXXXXXFNQAGIH 339
             S          SEM MSLFK+KI GVLK G F+DKRP+K            FNQAGIH
Sbjct: 275 NESDEGNGDPSPGSEMEMSLFKEKINGVLKLGGFDDKRPAKLSGKELLQLLSLFNQAGIH 334

Query: 340 FHHQAK 357
           FH QAK
Sbjct: 335 FHDQAK 340


>emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera]
          Length = 383

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 63/138 (45%), Positives = 73/138 (52%), Gaps = 19/138 (13%)
 Frame = +1

Query: 1   AFTRTCFSKKNKTLGATFKQKRKVVELFKRSQMI-------------------DVFEENG 123
           AFTRTCFSKKNKTLGATFK KR+V+EL++ S +                    D  EE G
Sbjct: 243 AFTRTCFSKKNKTLGATFKHKRRVMELWRLSNLRGSETGNAVSGCNYDCSYDEDKEEEEG 302

Query: 124 VEQYSFXXXXXXXXXXXXXXCSLVCSEMAMSLFKDKIVGVLKAGEFEDKRPSKXXXXXXX 303
            E++                     SEM MSLFK+KI GVLK G F+DKRP+K       
Sbjct: 303 NERHEGNGDPSPG------------SEMEMSLFKEKINGVLKLGGFDDKRPAKLSGKELL 350

Query: 304 XXXXXFNQAGIHFHHQAK 357
                FNQAGIHFH QAK
Sbjct: 351 QLLSLFNQAGIHFHDQAK 368


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