BLASTX nr result

ID: Coptis21_contig00016689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016689
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306696.1| predicted protein [Populus trichocarpa] gi|2...    64   4e-17
ref|XP_003548654.1| PREDICTED: uncharacterized protein LOC100792...    59   2e-15
ref|XP_003548113.1| PREDICTED: auxin-induced protein 5NG4-like [...    59   3e-15
gb|ACU19645.1| unknown [Glycine max]                                   59   3e-15
ref|XP_003517839.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induce...    54   6e-14

>ref|XP_002306696.1| predicted protein [Populus trichocarpa] gi|222856145|gb|EEE93692.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score = 63.5 bits (153), Expect(2) = 4e-17
 Identities = 29/47 (61%), Positives = 39/47 (82%)
 Frame = +3

Query: 270 ISRKQAPPMSCPVLFRIFFASLFGMTLSLNLYYVALNYTSATFAAAS 410
           + RK+A P+S  +LF+IF  SL G+TLSLNLYY+A+NYT+AT AAA+
Sbjct: 56  LERKEAAPLSYGLLFKIFLVSLCGVTLSLNLYYIAINYTTATLAAAT 102



 Score = 49.7 bits (117), Expect(2) = 4e-17
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = +1

Query: 400 LLLPSTNTIPAITFIVATFLRMESISMRHLYGVAKLFG 513
           L   +TN IPAITF +A  LRMESIS++H++G+AK+ G
Sbjct: 98  LAAATTNAIPAITFAMAALLRMESISIKHVHGIAKVLG 135


>ref|XP_003548654.1| PREDICTED: uncharacterized protein LOC100792261 [Glycine max]
          Length = 471

 Score = 59.3 bits (142), Expect(2) = 2e-15
 Identities = 26/44 (59%), Positives = 36/44 (81%)
 Frame = +3

Query: 279 KQAPPMSCPVLFRIFFASLFGMTLSLNLYYVALNYTSATFAAAS 410
           KQ+ P+SC +L ++F  SL G+T S NLYYV++NYT+ATFAAA+
Sbjct: 69  KQSAPLSCNMLCKLFLVSLVGLTASSNLYYVSINYTTATFAAAA 112



 Score = 48.5 bits (114), Expect(2) = 2e-15
 Identities = 20/34 (58%), Positives = 30/34 (88%)
 Frame = +1

Query: 412 STNTIPAITFIVATFLRMESISMRHLYGVAKLFG 513
           +TNT+PAITFI+A  +RMESIS++ ++G+AK+ G
Sbjct: 112 ATNTVPAITFIMAVLIRMESISIKRVHGLAKILG 145


>ref|XP_003548113.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 366

 Score = 58.5 bits (140), Expect(2) = 3e-15
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +3

Query: 279 KQAPPMSCPVLFRIFFASLFGMTLSLNLYYVALNYTSATFAAAS 410
           KQ  P+SC +L ++F  SL G+T S NLYYV++NYT+ATFAAA+
Sbjct: 69  KQPAPLSCNLLCKLFLVSLVGLTASSNLYYVSINYTTATFAAAA 112



 Score = 48.5 bits (114), Expect(2) = 3e-15
 Identities = 20/34 (58%), Positives = 30/34 (88%)
 Frame = +1

Query: 412 STNTIPAITFIVATFLRMESISMRHLYGVAKLFG 513
           +TNT+PAITFI+A  +RMESIS++ ++G+AK+ G
Sbjct: 112 ATNTVPAITFIMAVLIRMESISIKRVHGLAKILG 145


>gb|ACU19645.1| unknown [Glycine max]
          Length = 365

 Score = 58.5 bits (140), Expect(2) = 3e-15
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +3

Query: 279 KQAPPMSCPVLFRIFFASLFGMTLSLNLYYVALNYTSATFAAAS 410
           KQ  P+SC +L ++F  SL G+T S NLYYV++NYT+ATFAAA+
Sbjct: 69  KQPAPLSCNLLCKLFLVSLVGLTASSNLYYVSINYTTATFAAAA 112



 Score = 48.5 bits (114), Expect(2) = 3e-15
 Identities = 20/34 (58%), Positives = 30/34 (88%)
 Frame = +1

Query: 412 STNTIPAITFIVATFLRMESISMRHLYGVAKLFG 513
           +TNT+PAITFI+A  +RMESIS++ ++G+AK+ G
Sbjct: 112 ATNTVPAITFIMAVLIRMESISIKRVHGLAKILG 145


>ref|XP_003517839.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein 5NG4-like
           [Glycine max]
          Length = 216

 Score = 53.9 bits (128), Expect(2) = 6e-14
 Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
 Frame = +3

Query: 279 KQAPPMSC----PVLFRIFFASLFGMTLSLNLYYVALNYTSATFAAAS 410
           KQ+ P+SC     +L ++F  SL G+T S NLYYV++NYT+ATFAAA+
Sbjct: 69  KQSAPLSCNLLCKLLCKLFLVSLVGLTASSNLYYVSINYTTATFAAAA 116



 Score = 48.5 bits (114), Expect(2) = 6e-14
 Identities = 20/34 (58%), Positives = 30/34 (88%)
 Frame = +1

Query: 412 STNTIPAITFIVATFLRMESISMRHLYGVAKLFG 513
           +TNT+PAITFI+A  +RMESIS++ ++G+AK+ G
Sbjct: 116 ATNTVPAITFIMAVLIRMESISVKRVHGLAKILG 149


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