BLASTX nr result

ID: Coptis21_contig00016681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016681
         (2810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277931.1| PREDICTED: homeobox protein knotted-1-like 1...   229   4e-57
gb|ADF81047.1| KNOTTED-like homebox protein 2 [Cocos nucifera]        222   5e-55
gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]       221   1e-54
ref|XP_002512511.1| homeobox protein knotted-1, putative [Ricinu...   221   1e-54
ref|XP_002330254.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-50

>ref|XP_002277931.1| PREDICTED: homeobox protein knotted-1-like 1 [Vitis vinifera]
           gi|147820996|emb|CAN77695.1| hypothetical protein
           VITISV_015614 [Vitis vinifera]
           gi|296089776|emb|CBI39595.3| unnamed protein product
           [Vitis vinifera]
          Length = 310

 Score =  229 bits (583), Expect = 4e-57
 Identities = 116/189 (61%), Positives = 145/189 (76%)
 Frame = -2

Query: 568 MSDLIKAQIASHPRFPCLLSAYIECQKIGAPPEMASLLEEIGKENRPSGSCSTEIGDDPE 389
           MSDLIK+QI +HPR+P L+SAYIEC+K+GAPPEMASLLEEIG+E++P  S S EIG DPE
Sbjct: 47  MSDLIKSQIVNHPRYPNLVSAYIECRKVGAPPEMASLLEEIGRESQPMNSRSGEIGADPE 106

Query: 388 LDEFMESYCKVLVQYKQELSKPFDEAATFLSNIETQLNDICEGMSTSNISAGNYHSDEAV 209
           LDEFMESYC+VL +YK+ELSKPFDEA +FLS+IE+QL+++C+G  T+  S G+Y+SDEA 
Sbjct: 107 LDEFMESYCEVLHRYKEELSKPFDEATSFLSDIESQLSNLCKGALTAGTS-GSYYSDEAA 165

Query: 208 GSSEEELSCGEFEASGNQDFSGPNPANMELKNMLMQKYSGYLSNXXXXXXXXXXXXXXXX 29
           G+SEEELSCGE E S +Q+  G  P + ELK MLM+KYSGYLS+                
Sbjct: 166 GTSEEELSCGEAEVSESQESLGARPGDQELKEMLMRKYSGYLSSLRKEFLKKRKKGKLPK 225

Query: 28  XXRTTLLDW 2
             RT LL+W
Sbjct: 226 DARTMLLEW 234


>gb|ADF81047.1| KNOTTED-like homebox protein 2 [Cocos nucifera]
          Length = 317

 Score =  222 bits (565), Expect = 5e-55
 Identities = 119/195 (61%), Positives = 147/195 (75%), Gaps = 3/195 (1%)
 Frame = -2

Query: 577 GSEMSDLIKAQIASHPRFPCLLSAYIECQKIGAPPEMASLLEEIGKENRPSGSCSTEIGD 398
           GS+++DLIKAQIASHPR+P L+SAYIEC+K+GAPPEMASLLEEIG+  R   S   EIG 
Sbjct: 50  GSDLTDLIKAQIASHPRYPSLVSAYIECRKVGAPPEMASLLEEIGR--RRYTSAGGEIGA 107

Query: 397 DPELDEFMESYCKVLVQYKQELSKPFDEAATFLSNIETQLNDICEGMSTSN---ISAGNY 227
           DPELDEFMESYC+VL +YK+ELSKPFDEAA+FL++IE QL+++C+G +TS+    + GN 
Sbjct: 108 DPELDEFMESYCRVLQRYKEELSKPFDEAASFLNSIEVQLSNLCKGCTTSSSTTTATGNS 167

Query: 226 HSDEAVGSSEEELSCGEFEASGNQDFSGPNPANMELKNMLMQKYSGYLSNXXXXXXXXXX 47
            SDE VGSSEEELSCG+ +AS +Q+ SG   A+ ELK ML++KYSGYLSN          
Sbjct: 168 PSDEVVGSSEEELSCGDVDASESQE-SGSRLADHELKEMLLKKYSGYLSNLRKEFLKKRK 226

Query: 46  XXXXXXXXRTTLLDW 2
                   R TLLDW
Sbjct: 227 KGKLPKDARLTLLDW 241


>gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]
          Length = 318

 Score =  221 bits (562), Expect = 1e-54
 Identities = 117/195 (60%), Positives = 147/195 (75%), Gaps = 3/195 (1%)
 Frame = -2

Query: 577 GSEMSDLIKAQIASHPRFPCLLSAYIECQKIGAPPEMASLLEEIGKENRPSGSCSTEIGD 398
           GS+++DLIKAQIA+HPR+P L++AYIEC+K+GAPPEMASLLEEIG+E   S  C  EIG 
Sbjct: 53  GSDLTDLIKAQIANHPRYPSLVAAYIECRKVGAPPEMASLLEEIGRERYTSAGCG-EIGA 111

Query: 397 DPELDEFMESYCKVLVQYKQELSKPFDEAATFLSNIETQLNDICEGMSTSNIS---AGNY 227
           DPELDEFMESYC+VL +YK+ELSKPF+EAA+FL++IE QL+++C+G +TS+ +    GN 
Sbjct: 112 DPELDEFMESYCRVLQRYKEELSKPFNEAASFLNSIEMQLSNLCKGRTTSSSTTGGTGNS 171

Query: 226 HSDEAVGSSEEELSCGEFEASGNQDFSGPNPANMELKNMLMQKYSGYLSNXXXXXXXXXX 47
            SDE VGSSEEELSCG+ +AS  Q+ SG   A+ ELK ML++KYSGYLSN          
Sbjct: 172 PSDEMVGSSEEELSCGDVDASECQE-SGSRLADHELKEMLLKKYSGYLSNLRKEFLKKRK 230

Query: 46  XXXXXXXXRTTLLDW 2
                   R TLLDW
Sbjct: 231 KGKLPKDARLTLLDW 245


>ref|XP_002512511.1| homeobox protein knotted-1, putative [Ricinus communis]
           gi|223548472|gb|EEF49963.1| homeobox protein knotted-1,
           putative [Ricinus communis]
          Length = 327

 Score =  221 bits (562), Expect = 1e-54
 Identities = 113/195 (57%), Positives = 140/195 (71%)
 Frame = -2

Query: 586 KLSGSEMSDLIKAQIASHPRFPCLLSAYIECQKIGAPPEMASLLEEIGKENRPSGSCSTE 407
           ++S S+M  LIK QIA HPR+P L+SAYIECQK+GAPPEM SLLEEIG+EN     CS E
Sbjct: 58  QVSDSDMLGLIKTQIAHHPRYPDLVSAYIECQKVGAPPEMTSLLEEIGRENYSIKGCSGE 117

Query: 406 IGDDPELDEFMESYCKVLVQYKQELSKPFDEAATFLSNIETQLNDICEGMSTSNISAGNY 227
           +G DPELDEFMESYC+VL +YK+ELSKPFDEA TF S+IE+QL+++C+G  T      +Y
Sbjct: 118 MGADPELDEFMESYCEVLHRYKEELSKPFDEATTFFSDIESQLSNLCKGTLTKTF---HY 174

Query: 226 HSDEAVGSSEEELSCGEFEASGNQDFSGPNPANMELKNMLMQKYSGYLSNXXXXXXXXXX 47
            SDEAVG+SEEE+SCGE EAS +++  G  P + +LK ML++KYSGYLSN          
Sbjct: 175 GSDEAVGTSEEEISCGEIEASESRESCGSRPVDPDLKGMLLRKYSGYLSNLRKEFLKKRK 234

Query: 46  XXXXXXXXRTTLLDW 2
                   R  LLDW
Sbjct: 235 KGKLPKDARMILLDW 249


>ref|XP_002330254.1| predicted protein [Populus trichocarpa] gi|222871710|gb|EEF08841.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  207 bits (526), Expect = 2e-50
 Identities = 110/195 (56%), Positives = 138/195 (70%)
 Frame = -2

Query: 586 KLSGSEMSDLIKAQIASHPRFPCLLSAYIECQKIGAPPEMASLLEEIGKENRPSGSCSTE 407
           +++GS+M D IK QIA+HPR+P L+SA++ECQK+GAPPEM SLLE IG+ N    S   E
Sbjct: 56  EVTGSDMYDAIKTQIANHPRYPDLVSAHLECQKVGAPPEMVSLLEAIGRGNYKINSFY-E 114

Query: 406 IGDDPELDEFMESYCKVLVQYKQELSKPFDEAATFLSNIETQLNDICEGMSTSNISAGNY 227
           IG DPELDEFMESYC+VL +YK+ELSKPFDEAATFLS+IE+QL+ +C+G  T     G+ 
Sbjct: 115 IGADPELDEFMESYCEVLRRYKEELSKPFDEAATFLSSIESQLSSLCKGTLTKMFDYGS- 173

Query: 226 HSDEAVGSSEEELSCGEFEASGNQDFSGPNPANMELKNMLMQKYSGYLSNXXXXXXXXXX 47
            +DE  G+SEEELSCGE EAS +Q+ +G +     LK MLM+KYS +LSN          
Sbjct: 174 -ADEPAGTSEEELSCGEVEASESQETTGVSSQEQNLKGMLMRKYSAHLSNLRKEFLKNRK 232

Query: 46  XXXXXXXXRTTLLDW 2
                   RTTLLDW
Sbjct: 233 KGKLPKDARTTLLDW 247


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