BLASTX nr result

ID: Coptis21_contig00016678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016678
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307030.1| predicted protein [Populus trichocarpa] gi|2...   241   6e-62
ref|XP_002526639.1| polygalacturonase, putative [Ricinus communi...   238   3e-61
ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|2...   238   5e-61
ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [...   236   1e-60
ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [...   236   1e-60

>ref|XP_002307030.1| predicted protein [Populus trichocarpa] gi|222856479|gb|EEE94026.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  241 bits (614), Expect = 6e-62
 Identities = 110/121 (90%), Positives = 116/121 (95%)
 Frame = +1

Query: 1   PLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMWWNLWWNRTLEHTRGHL 180
           PLPSYGRGRERLGGRHISLIHGDGL +VVITG NGTIDGQGKMWW LWWNRTLEHTRGHL
Sbjct: 80  PLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQGKMWWELWWNRTLEHTRGHL 139

Query: 181 VELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTILAPLNSPNTDGIDPDSSTHVC 360
           VELMNSQ+ILISNLTF NSPFWTIHP+YCSN+VVK MTILAPLN+PNTDGIDPDSST+VC
Sbjct: 140 VELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILAPLNAPNTDGIDPDSSTNVC 199

Query: 361 I 363
           I
Sbjct: 200 I 200


>ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
           gi|223534031|gb|EEF35751.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 480

 Score =  238 bits (608), Expect = 3e-61
 Identities = 109/121 (90%), Positives = 115/121 (95%)
 Frame = +1

Query: 1   PLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMWWNLWWNRTLEHTRGHL 180
           PLPSYGRGRERLGGRHISLIHG+GL +V+ITG NG+IDGQGKMWW LWWNRTLEHTRGHL
Sbjct: 157 PLPSYGRGRERLGGRHISLIHGNGLTNVIITGNNGSIDGQGKMWWELWWNRTLEHTRGHL 216

Query: 181 VELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTILAPLNSPNTDGIDPDSSTHVC 360
           VELMNS NILISNLTF NSPFWTIHPVYCSNVVVK MTILAPLN+PNTDGIDPDSST+VC
Sbjct: 217 VELMNSHNILISNLTFRNSPFWTIHPVYCSNVVVKDMTILAPLNAPNTDGIDPDSSTNVC 276

Query: 361 I 363
           I
Sbjct: 277 I 277


>ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|222853420|gb|EEE90967.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  238 bits (606), Expect = 5e-61
 Identities = 108/121 (89%), Positives = 114/121 (94%)
 Frame = +1

Query: 1   PLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMWWNLWWNRTLEHTRGHL 180
           PLPSYGRGRERLGGRHISL+HGDGL +VVITG NGTIDGQGKMWW LWWNRTLEHTRGHL
Sbjct: 114 PLPSYGRGRERLGGRHISLVHGDGLTNVVITGNNGTIDGQGKMWWELWWNRTLEHTRGHL 173

Query: 181 VELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTILAPLNSPNTDGIDPDSSTHVC 360
           VELMNS NILI+NLTF N+PFWTIHPVYCSNVVVK MTILAPL +PNTDGIDPDSST+VC
Sbjct: 174 VELMNSNNILIANLTFCNAPFWTIHPVYCSNVVVKDMTILAPLKAPNTDGIDPDSSTNVC 233

Query: 361 I 363
           I
Sbjct: 234 I 234


>ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 477

 Score =  236 bits (603), Expect = 1e-60
 Identities = 105/121 (86%), Positives = 117/121 (96%)
 Frame = +1

Query: 1   PLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMWWNLWWNRTLEHTRGHL 180
           PLPSYGRGRERLGGRHISLIHG+G+ +VVITG+NGT+DGQG+MWW LWWNRTLEHTRGHL
Sbjct: 154 PLPSYGRGRERLGGRHISLIHGNGISNVVITGQNGTVDGQGRMWWELWWNRTLEHTRGHL 213

Query: 181 VELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTILAPLNSPNTDGIDPDSSTHVC 360
           +EL++S N+LISNLTF NSPFWTIHPVYCSNVVVKGMTILAPLN+PNTDGIDPDSST+VC
Sbjct: 214 LELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKGMTILAPLNAPNTDGIDPDSSTNVC 273

Query: 361 I 363
           I
Sbjct: 274 I 274


>ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
          Length = 472

 Score =  236 bits (602), Expect = 1e-60
 Identities = 108/121 (89%), Positives = 114/121 (94%)
 Frame = +1

Query: 1   PLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMWWNLWWNRTLEHTRGHL 180
           PLPSYGRGRERLGGRHISLIHG+ L +VVITGENGTIDGQGKMWW LWWNRTL HTRGHL
Sbjct: 149 PLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGKMWWELWWNRTLNHTRGHL 208

Query: 181 VELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTILAPLNSPNTDGIDPDSSTHVC 360
           VEL+NS NILISNLTF NSPFWTIHPVYCSNVV+K MTILAPLN+PNTDGIDPDSST+VC
Sbjct: 209 VELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVC 268

Query: 361 I 363
           I
Sbjct: 269 I 269


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